RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 KLRK1P26718 216 aa9.69□□□□□ -0.86
CD44-211ENST00000442151 MLLT1Q03111 559 aaPredicted RBP9.69□□□□□ -0.86
CD44-211ENST00000442151 ANKRD13AQ8IZ07 590 aa9.69□□□□□ -0.86
CD44-211ENST00000442151 LPIN2Q92539 896 aa9.69□□□□□ -0.86
CD44-211ENST00000442151 ARHGAP45Q92619 1136 aa9.69□□□□□ -0.86
CD44-211ENST00000442151 TEKT1Q969V4 418 aa9.69□□□□□ -0.86
CD44-211ENST00000442151 USP44Q9H0E7 712 aa9.69□□□□□ -0.86
CD44-211ENST00000442151 CEP126Q9P2H0 1117 aa9.69□□□□□ -0.86
CD44-211ENST00000442151 EYA2O00167 538 aa9.68□□□□□ -0.86
CD44-211ENST00000442151 GNAI3P08754 354 aa9.68□□□□□ -0.86
CD44-211ENST00000442151 GYG1P46976 350 aa9.68□□□□□ -0.86
CD44-211ENST00000442151 RGS19P49795 217 aa9.68□□□□□ -0.86
CD44-211ENST00000442151 PTPN12Q05209 780 aaKnown RBP9.68□□□□□ -0.86
CD44-211ENST00000442151 TRMT2AQ8IZ69 625 aaKnown RBP9.68□□□□□ -0.86
CD44-211ENST00000442151 PRMT6Q96LA8 375 aaPredicted RBP9.68□□□□□ -0.86
CD44-211ENST00000442151 CFHR5Q9BXR6 569 aa9.68□□□□□ -0.86
CD44-211ENST00000442151 FKTNO75072 461 aa9.68□□□□□ -0.86
CD44-211ENST00000442151 CIAO1O76071 339 aa9.68□□□□□ -0.86
CD44-211ENST00000442151 RASA3Q14644 834 aa9.68□□□□□ -0.86
CD44-211ENST00000442151 GSE1Q14687 1217 aa9.68□□□□□ -0.86
CD44-211ENST00000442151 FKBP1CQ5VVH2 108 aa9.68□□□□□ -0.86
CD44-211ENST00000442151 PRAMEF18Q5VWM3 479 aa9.68□□□□□ -0.86
CD44-211ENST00000442151 SPRYD7Q5W111 196 aa9.68□□□□□ -0.86
CD44-211ENST00000442151 ZGPATQ8N5A5 531 aaKnown RBP9.68□□□□□ -0.86
CD44-211ENST00000442151 CERS5Q8N5B7 392 aa9.68□□□□□ -0.86
CD44-211ENST00000442151 KAZALD1Q96I82 304 aa9.68□□□□□ -0.86
CD44-211ENST00000442151 ZIC5Q96T25 663 aa9.68□□□□□ -0.86
CD44-211ENST00000442151 PUS3Q9BZE2 481 aaKnown RBP9.68□□□□□ -0.86
CD44-211ENST00000442151 ZNF70Q9UC06 446 aaPredicted RBP9.68□□□□□ -0.86
CD44-211ENST00000442151 CLRN2A0PK11 232 aa9.67□□□□□ -0.86
CD44-211ENST00000442151 SNAP23O00161 211 aa9.67□□□□□ -0.86
CD44-211ENST00000442151 SEMA3EO15041 775 aa9.67□□□□□ -0.86
CD44-211ENST00000442151 CRKP46108 304 aa9.67□□□□□ -0.86
CD44-211ENST00000442151 CHAF1AQ13111 956 aaPredicted RBP9.67□□□□□ -0.86
CD44-211ENST00000442151 PDAP1Q13442 181 aaKnown RBP9.67□□□□□ -0.86
CD44-211ENST00000442151 PRKG1Q13976 671 aa9.67□□□□□ -0.86
CD44-211ENST00000442151 SLF2Q8IX21 1173 aa9.67□□□□□ -0.86
CD44-211ENST00000442151 DZIP1LQ8IYY4 767 aaKnown RBP9.67□□□□□ -0.86
CD44-211ENST00000442151 AKAP2Q9Y2D5 859 aa9.67□□□□□ -0.86
CD44-211ENST00000442151 CSADQ9Y600 493 aa9.67□□□□□ -0.86
CD44-211ENST00000442151 IL15P40933 162 aaPredicted RBP9.66□□□□□ -0.86
CD44-211ENST00000442151 DCAF15Q66K64 600 aa9.66□□□□□ -0.86
CD44-211ENST00000442151 HHIPL2Q6UWX4 724 aa9.66□□□□□ -0.86
CD44-211ENST00000442151 MOB2Q70IA6 237 aa9.66□□□□□ -0.86
CD44-211ENST00000442151 FAM83AQ86UY5 434 aa9.66□□□□□ -0.86
CD44-211ENST00000442151 ANKRD44Q8N8A2 993 aa9.66□□□□□ -0.86
CD44-211ENST00000442151 DENND2AQ9ULE3 1009 aa9.66□□□□□ -0.86
CD44-211ENST00000442151 NOB1Q9ULX3 412 aaKnown RBP9.66□□□□□ -0.86
CD44-211ENST00000442151 GPR25O00155 361 aa9.66□□□□□ -0.86
CD44-211ENST00000442151 MAP3K9P80192 1104 aa9.66□□□□□ -0.86
CD44-211ENST00000442151 LRRC24Q50LG9 513 aa9.66□□□□□ -0.86
CD44-211ENST00000442151 ARSIQ5FYB1 569 aa9.66□□□□□ -0.86
CD44-211ENST00000442151 SPTY2D1Q68D10 685 aaPredicted RBP9.66□□□□□ -0.86
CD44-211ENST00000442151 WNK4Q96J92 1243 aa9.66□□□□□ -0.86
CD44-211ENST00000442151 ZDHHC15Q96MV8 337 aa9.66□□□□□ -0.86
CD44-211ENST00000442151 TDRD3Q9H7E2 651 aaKnown RBP9.66□□□□□ -0.86
CD44-211ENST00000442151 USP2O75604 605 aaPredicted RBP9.65□□□□□ -0.86
CD44-211ENST00000442151 TBC1D8O95759 1140 aa9.65□□□□□ -0.86
CD44-211ENST00000442151 NBPF12Q5TAG4 269 aaPredicted RBP9.65□□□□□ -0.86
CD44-211ENST00000442151 ERO1AQ96HE7 468 aa9.65□□□□□ -0.86
CD44-211ENST00000442151 FGFR2P21802 821 aa9.64□□□□□ -0.87
CD44-211ENST00000442151 BCAMP50895 628 aa9.64□□□□□ -0.87
CD44-211ENST00000442151 GTF2A2P52657 109 aa9.64□□□□□ -0.87
CD44-211ENST00000442151 ATP2B3Q16720 1220 aa9.64□□□□□ -0.87
CD44-211ENST00000442151 VGLL2Q8N8G2 317 aa9.64□□□□□ -0.87
CD44-211ENST00000442151 CDCA7LQ96GN5 454 aa9.64□□□□□ -0.87
CD44-211ENST00000442151 SCAF8Q9UPN6 1271 aaKnown RBP9.64□□□□□ -0.87
CD44-211ENST00000442151 JAG2Q9Y219 1238 aa9.64□□□□□ -0.87
CD44-211ENST00000442151 CASP8AP2Q9UKL3 1982 aa9.64□□□□□ -0.87
CD44-211ENST00000442151 TCP10L2B9ZVM9 353 aa9.63□□□□□ -0.87
CD44-211ENST00000442151 LDHBP07195 334 aaKnown RBP9.63□□□□□ -0.87
CD44-211ENST00000442151 INTS3Q68E01 1043 aaKnown RBP9.63□□□□□ -0.87
CD44-211ENST00000442151 FBXO46Q6PJ61 603 aaPredicted RBP9.63□□□□□ -0.87
CD44-211ENST00000442151 ZNF296Q8WUU4 475 aaPredicted RBP9.63□□□□□ -0.87
CD44-211ENST00000442151 COPRSQ9NQ92 184 aa9.63□□□□□ -0.87
CD44-211ENST00000442151 TESPA1A2RU30 521 aaPredicted RBP9.63□□□□□ -0.87
CD44-211ENST00000442151 IGSF3O75054 1194 aa9.63□□□□□ -0.87
CD44-211ENST00000442151 MAP4K4O95819 1239 aaPredicted RBP9.63□□□□□ -0.87
CD44-211ENST00000442151 RARSP54136 660 aaKnown RBP9.63□□□□□ -0.87
CD44-211ENST00000442151 MVPQ14764 893 aaKnown RBP9.63□□□□□ -0.87
CD44-211ENST00000442151 ZNF341Q9BYN7 854 aa9.63□□□□□ -0.87
CD44-211ENST00000442151 ZFYVE28Q9HCC9 887 aa9.63□□□□□ -0.87
CD44-211ENST00000442151 ZCCHC17Q9NP64 241 aaKnown RBP9.63□□□□□ -0.87
CD44-211ENST00000442151 ECM29Q5VYK3 1845 aa9.63□□□□□ -0.87
CD44-211ENST00000442151 GNAI2P04899 355 aa9.62□□□□□ -0.87
CD44-211ENST00000442151 LDHCP07864 332 aa9.62□□□□□ -0.87
CD44-211ENST00000442151 CETPP11597 493 aa9.62□□□□□ -0.87
CD44-211ENST00000442151 RFX5P48382 616 aaPredicted RBP9.62□□□□□ -0.87
CD44-211ENST00000442151 GORABQ5T7V8 394 aa9.62□□□□□ -0.87
CD44-211ENST00000442151 ERO1BQ86YB8 467 aa9.62□□□□□ -0.87
CD44-211ENST00000442151 FAM151AQ8WW52 585 aa9.62□□□□□ -0.87
CD44-211ENST00000442151 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.62□□□□□ -0.87
CD44-211ENST00000442151 IQSEC3Q9UPP2 1182 aaPredicted RBP9.62□□□□□ -0.87
CD44-211ENST00000442151 SALL1Q9NSC2 1324 aa9.61□□□□□ -0.87
CD44-211ENST00000442151 G3BP1Q13283 466 aaKnown RBP eCLIP9.61□□□□□ -0.87
CD44-211ENST00000442151 KIF22Q14807 665 aa9.61□□□□□ -0.87
CD44-211ENST00000442151 OPTNQ96CV9 577 aa9.61□□□□□ -0.87
CD44-211ENST00000442151 ELP3Q9H9T3 547 aa9.61□□□□□ -0.87
CD44-211ENST00000442151 LRRFIP2Q9Y608 721 aaKnown RBP9.61□□□□□ -0.87
CD44-211ENST00000442151 PDS5AQ29RF7 1337 aaKnown RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms