RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 ERICH6Q7L0X2 663 aa16.88■□□□□ 0.29
LTBR-202ENST00000440421 SIRT2Q8IXJ6 389 aa16.88■□□□□ 0.29
LTBR-202ENST00000440421 EAF2Q96CJ1 260 aaPredicted RBP16.88■□□□□ 0.29
LTBR-202ENST00000440421 SNRKQ9NRH2 765 aa16.88■□□□□ 0.29
LTBR-202ENST00000440421 HMMRO75330 724 aa16.87■□□□□ 0.29
LTBR-202ENST00000440421 IREB2P48200 963 aaKnown RBP16.87■□□□□ 0.29
LTBR-202ENST00000440421 MAP3K11Q16584 847 aa16.87■□□□□ 0.29
LTBR-202ENST00000440421 ERC1Q8IUD2 1116 aa16.87■□□□□ 0.29
LTBR-202ENST00000440421 CLMNQ96JQ2 1002 aa16.87■□□□□ 0.29
LTBR-202ENST00000440421 CSRNP1Q96S65 589 aa16.87■□□□□ 0.29
LTBR-202ENST00000440421 BCL11AQ9H165 835 aa16.87■□□□□ 0.29
LTBR-202ENST00000440421 PRDM10Q9NQV6 1147 aa16.87■□□□□ 0.29
LTBR-202ENST00000440421 USP40Q9NVE5 1235 aa16.87■□□□□ 0.29
LTBR-202ENST00000440421 DBNLQ9UJU6 430 aaKnown RBP16.87■□□□□ 0.29
LTBR-202ENST00000440421 MYH2Q9UKX2 1941 aa16.87■□□□□ 0.29
LTBR-202ENST00000440421 MECOMQ03112 1051 aa16.86■□□□□ 0.29
LTBR-202ENST00000440421 TCP10Q12799 353 aa16.86■□□□□ 0.29
LTBR-202ENST00000440421 HSP90AB4PQ58FF6 505 aa16.86■□□□□ 0.29
LTBR-202ENST00000440421 FKBP1CQ5VVH2 108 aa16.86■□□□□ 0.29
LTBR-202ENST00000440421 FAM83AQ86UY5 434 aa16.86■□□□□ 0.29
LTBR-202ENST00000440421 AACSQ86V21 672 aa16.86■□□□□ 0.29
LTBR-202ENST00000440421 SLC10A4Q96EP9 437 aa16.86■□□□□ 0.29
LTBR-202ENST00000440421 IL1RAPL2Q9NP60 686 aa16.86■□□□□ 0.29
LTBR-202ENST00000440421 RAI14Q9P0K7 980 aa16.86■□□□□ 0.29
LTBR-202ENST00000440421 CA12O43570 354 aa16.85■□□□□ 0.29
LTBR-202ENST00000440421 NFIAQ12857 509 aa16.85■□□□□ 0.29
LTBR-202ENST00000440421 SLF2Q8IX21 1173 aa16.85■□□□□ 0.29
LTBR-202ENST00000440421 TNS4Q8IZW8 715 aa16.85■□□□□ 0.29
LTBR-202ENST00000440421 RHPN1Q8TCX5 695 aa16.85■□□□□ 0.29
LTBR-202ENST00000440421 LRP2BPQ9P2M1 347 aa16.85■□□□□ 0.29
LTBR-202ENST00000440421 GAKO14976 1311 aa16.85■□□□□ 0.29
LTBR-202ENST00000440421 BTDP43251 543 aa16.84■□□□□ 0.29
LTBR-202ENST00000440421 SPRYD7Q5W111 196 aa16.84■□□□□ 0.29
LTBR-202ENST00000440421 ANKRD13AQ8IZ07 590 aa16.84■□□□□ 0.29
LTBR-202ENST00000440421 ZNF384Q8TF68 577 aa16.84■□□□□ 0.29
LTBR-202ENST00000440421 RNF186Q9NXI6 227 aa16.84■□□□□ 0.29
LTBR-202ENST00000440421 MROH7-TTC4A0A0A0MT08 1334 aa16.83■□□□□ 0.28
LTBR-202ENST00000440421 TRPA1O75762 1119 aa16.83■□□□□ 0.28
LTBR-202ENST00000440421 ZAP70P43403 619 aa16.83■□□□□ 0.28
LTBR-202ENST00000440421 FAM151AQ8WW52 585 aa16.83■□□□□ 0.28
LTBR-202ENST00000440421 NSUN4Q96CB9 384 aaKnown RBP16.83■□□□□ 0.28
LTBR-202ENST00000440421 ZNF512BQ96KM6 892 aaPredicted RBP16.83■□□□□ 0.28
LTBR-202ENST00000440421 OTOFQ9HC10 1997 aa16.83■□□□□ 0.28
LTBR-202ENST00000440421 FAM198AQ9UFP1 575 aa16.83■□□□□ 0.28
LTBR-202ENST00000440421 AKAP11Q9UKA4 1901 aa16.82■□□□□ 0.28
LTBR-202ENST00000440421 CYP2E1P05181 493 aaPredicted RBP16.82■□□□□ 0.28
LTBR-202ENST00000440421 RRP1P56182 461 aaKnown RBP16.82■□□□□ 0.28
LTBR-202ENST00000440421 GSTO1P78417 241 aa16.82■□□□□ 0.28
LTBR-202ENST00000440421 ZFPM1Q8IX07 1006 aa16.82■□□□□ 0.28
LTBR-202ENST00000440421 REM2Q8IYK8 340 aaPredicted RBP16.82■□□□□ 0.28
LTBR-202ENST00000440421 KIF1BPQ96EK5 621 aa16.82■□□□□ 0.28
LTBR-202ENST00000440421 FAM163AQ96GL9 167 aaPredicted RBP16.82■□□□□ 0.28
LTBR-202ENST00000440421 WNK4Q96J92 1243 aa16.82■□□□□ 0.28
LTBR-202ENST00000440421 ELP3Q9H9T3 547 aa16.82■□□□□ 0.28
LTBR-202ENST00000440421 RPAP1Q9BWH6 1393 aaPredicted RBP16.81■□□□□ 0.28
LTBR-202ENST00000440421 UNCXA6NJT0 531 aa16.81■□□□□ 0.28
LTBR-202ENST00000440421 LDHCP07864 332 aa16.81■□□□□ 0.28
LTBR-202ENST00000440421 RGS3P49796 1198 aa16.81■□□□□ 0.28
LTBR-202ENST00000440421 MAP3K9P80192 1104 aa16.81■□□□□ 0.28
LTBR-202ENST00000440421 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.81■□□□□ 0.28
LTBR-202ENST00000440421 MIGA2Q7L4E1 593 aa16.81■□□□□ 0.28
LTBR-202ENST00000440421 CLASRPQ8N2M8 674 aaKnown RBP16.81■□□□□ 0.28
LTBR-202ENST00000440421 HOOK2Q96ED9 719 aa16.81■□□□□ 0.28
LTBR-202ENST00000440421 PIH1D3Q9NQM4 214 aaKnown RBP16.81■□□□□ 0.28
LTBR-202ENST00000440421 NDUFB9Q9Y6M9 179 aa16.81■□□□□ 0.28
LTBR-202ENST00000440421 AK9Q5TCS8 1911 aa16.8■□□□□ 0.28
LTBR-202ENST00000440421 GPR75-ASB3A0A0A6YYF3 556 aa16.8■□□□□ 0.28
LTBR-202ENST00000440421 RAB11FIP3O75154 756 aa16.8■□□□□ 0.28
LTBR-202ENST00000440421 SREBF2Q12772 1141 aa16.8■□□□□ 0.28
LTBR-202ENST00000440421 PICALMQ13492 652 aa16.8■□□□□ 0.28
LTBR-202ENST00000440421 VGLL4Q14135 290 aa16.8■□□□□ 0.28
LTBR-202ENST00000440421 IFFO2Q5TF58 517 aa16.8■□□□□ 0.28
LTBR-202ENST00000440421 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.8■□□□□ 0.28
LTBR-202ENST00000440421 SAGE1Q9NXZ1 904 aa16.8■□□□□ 0.28
LTBR-202ENST00000440421 WDHD1O75717 1129 aaPredicted RBP16.79■□□□□ 0.28
LTBR-202ENST00000440421 IFIT2P09913 472 aaKnown RBP16.79■□□□□ 0.28
LTBR-202ENST00000440421 ZBTB48P10074 688 aaPredicted RBP16.79■□□□□ 0.28
LTBR-202ENST00000440421 GJA5P36382 358 aa16.79■□□□□ 0.28
LTBR-202ENST00000440421 TM4SF4P48230 202 aa16.79■□□□□ 0.28
LTBR-202ENST00000440421 DCAF15Q66K64 600 aa16.79■□□□□ 0.28
LTBR-202ENST00000440421 NAA16Q6N069 864 aaPredicted RBP16.79■□□□□ 0.28
LTBR-202ENST00000440421 ZSCAN29Q8IWY8 852 aaPredicted RBP16.79■□□□□ 0.28
LTBR-202ENST00000440421 CNKSR2Q8WXI2 1034 aa16.79■□□□□ 0.28
LTBR-202ENST00000440421 OPTNQ96CV9 577 aa16.79■□□□□ 0.28
LTBR-202ENST00000440421 WRNIP1Q96S55 665 aa16.79■□□□□ 0.28
LTBR-202ENST00000440421 IDI2Q9BXS1 227 aa16.79■□□□□ 0.28
LTBR-202ENST00000440421 DDX4Q9NQI0 724 aaKnown RBP16.79■□□□□ 0.28
LTBR-202ENST00000440421 CSADQ9Y600 493 aa16.79■□□□□ 0.28
LTBR-202ENST00000440421 MAST2Q6P0Q8 1798 aa16.79■□□□□ 0.28
LTBR-202ENST00000440421 RFX7Q2KHR2 1363 aa16.78■□□□□ 0.28
LTBR-202ENST00000440421 MYO5AQ9Y4I1 1855 aaKnown RBP16.78■□□□□ 0.28
LTBR-202ENST00000440421 ENTPD3O75355 529 aa16.78■□□□□ 0.28
LTBR-202ENST00000440421 RHBDL3P58872 404 aa16.78■□□□□ 0.28
LTBR-202ENST00000440421 ZKSCAN4Q969J2 545 aaPredicted RBP16.78■□□□□ 0.28
LTBR-202ENST00000440421 NOL10Q9BSC4 688 aaKnown RBP16.78■□□□□ 0.28
LTBR-202ENST00000440421 ZNF341Q9BYN7 854 aa16.78■□□□□ 0.28
LTBR-202ENST00000440421 MANSC4A6NHS7 340 aaPredicted RBP16.77■□□□□ 0.28
LTBR-202ENST00000440421 IDH1O75874 414 aaKnown RBP16.77■□□□□ 0.28
LTBR-202ENST00000440421 SH3BP5LQ7L8J4 393 aa16.77■□□□□ 0.28
LTBR-202ENST00000440421 ANTXR1Q9H6X2 564 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms