RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 BIN2Q9UBW5 565 aaPredicted RBP14.36□□□□□ -0.11
CSTF3-203ENST00000438862 ZSWIM8A7E2V4 1837 aa14.36□□□□□ -0.11
CSTF3-203ENST00000438862 LAMA3Q16787 3333 aa14.35□□□□□ -0.11
CSTF3-203ENST00000438862 SPDYE5A6NIY4 337 aa14.35□□□□□ -0.11
CSTF3-203ENST00000438862 BTBD19C9JJ37 291 aa14.35□□□□□ -0.11
CSTF3-203ENST00000438862 SGPL1O95470 568 aa14.35□□□□□ -0.11
CSTF3-203ENST00000438862 DDX58O95786 925 aaKnown RBP14.35□□□□□ -0.11
CSTF3-203ENST00000438862 KLRK1P26718 216 aa14.35□□□□□ -0.11
CSTF3-203ENST00000438862 TMEM92Q6UXU6 159 aa14.35□□□□□ -0.11
CSTF3-203ENST00000438862 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.35□□□□□ -0.11
CSTF3-203ENST00000438862 MPHOSPH8Q99549 860 aa14.35□□□□□ -0.11
CSTF3-203ENST00000438862 FMNL1O95466 1100 aaPredicted RBP14.34□□□□□ -0.11
CSTF3-203ENST00000438862 HOXB1P14653 301 aaPredicted RBP14.34□□□□□ -0.11
CSTF3-203ENST00000438862 IL1R1P14778 569 aa14.34□□□□□ -0.11
CSTF3-203ENST00000438862 OSBPP22059 807 aa14.34□□□□□ -0.11
CSTF3-203ENST00000438862 TNNI2P48788 182 aa14.34□□□□□ -0.11
CSTF3-203ENST00000438862 SNAPC2Q13487 334 aa14.34□□□□□ -0.11
CSTF3-203ENST00000438862 C15orf52Q6ZUT6 534 aaKnown RBP14.34□□□□□ -0.11
CSTF3-203ENST00000438862 ERO1BQ86YB8 467 aa14.34□□□□□ -0.11
CSTF3-203ENST00000438862 TEPSINQ96N21 525 aa14.34□□□□□ -0.11
CSTF3-203ENST00000438862 LRIT3Q3SXY7 679 aa14.33□□□□□ -0.12
CSTF3-203ENST00000438862 GDF15Q99988 308 aa14.33□□□□□ -0.12
CSTF3-203ENST00000438862 MTMR10Q9NXD2 777 aa14.33□□□□□ -0.12
CSTF3-203ENST00000438862 ZNF70Q9UC06 446 aaPredicted RBP14.33□□□□□ -0.12
CSTF3-203ENST00000438862 MYPNQ86TC9 1320 aa14.33□□□□□ -0.12
CSTF3-203ENST00000438862 CTGFP29279 349 aa14.32□□□□□ -0.12
CSTF3-203ENST00000438862 NEUROD2Q15784 382 aa14.32□□□□□ -0.12
CSTF3-203ENST00000438862 ZNF804AQ7Z570 1209 aa14.32□□□□□ -0.12
CSTF3-203ENST00000438862 CHMP4AQ9BY43 222 aa14.32□□□□□ -0.12
CSTF3-203ENST00000438862 SERPINA10Q9UK55 444 aa14.32□□□□□ -0.12
CSTF3-203ENST00000438862 AOX1Q06278 1338 aa14.32□□□□□ -0.12
CSTF3-203ENST00000438862 UNC80Q8N2C7 3258 aa14.31□□□□□ -0.12
CSTF3-203ENST00000438862 IRF6O14896 467 aa14.31□□□□□ -0.12
CSTF3-203ENST00000438862 TFRCP02786 760 aaKnown RBP14.31□□□□□ -0.12
CSTF3-203ENST00000438862 CHRNDQ07001 517 aa14.31□□□□□ -0.12
CSTF3-203ENST00000438862 PPIL2Q13356 520 aa14.31□□□□□ -0.12
CSTF3-203ENST00000438862 Q7L0L9 218 aa14.31□□□□□ -0.12
CSTF3-203ENST00000438862 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.31□□□□□ -0.12
CSTF3-203ENST00000438862 TDRD3Q9H7E2 651 aaKnown RBP14.31□□□□□ -0.12
CSTF3-203ENST00000438862 CPA4Q9UI42 421 aa14.31□□□□□ -0.12
CSTF3-203ENST00000438862 ZNF316A6NFI3 1004 aaPredicted RBP14.3□□□□□ -0.12
CSTF3-203ENST00000438862 ECM2O94769 699 aaPredicted RBP14.3□□□□□ -0.12
CSTF3-203ENST00000438862 ITGA6P23229 1130 aa14.3□□□□□ -0.12
CSTF3-203ENST00000438862 NEXNQ0ZGT2 675 aa14.3□□□□□ -0.12
CSTF3-203ENST00000438862 ANKRD23Q86SG2 305 aa14.3□□□□□ -0.12
CSTF3-203ENST00000438862 TMEM39BQ9GZU3 492 aa14.3□□□□□ -0.12
CSTF3-203ENST00000438862 UNC93B1Q9H1C4 597 aa14.3□□□□□ -0.12
CSTF3-203ENST00000438862 MAP3K2Q9Y2U5 619 aa14.3□□□□□ -0.12
CSTF3-203ENST00000438862 SNCAIPQ9Y6H5 919 aa14.3□□□□□ -0.12
CSTF3-203ENST00000438862 IRS2Q9Y4H2 1338 aa14.3□□□□□ -0.12
CSTF3-203ENST00000438862 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.29□□□□□ -0.12
CSTF3-203ENST00000438862 TCP10L2B9ZVM9 353 aa14.29□□□□□ -0.12
CSTF3-203ENST00000438862 RIOK3O14730 519 aaKnown RBP14.29□□□□□ -0.12
CSTF3-203ENST00000438862 IGKV5-2P06315 115 aa14.29□□□□□ -0.12
CSTF3-203ENST00000438862 KSR2Q6VAB6 950 aa14.29□□□□□ -0.12
CSTF3-203ENST00000438862 HOOK2Q96ED9 719 aa14.29□□□□□ -0.12
CSTF3-203ENST00000438862 ZFP91Q96JP5 570 aaPredicted RBP14.29□□□□□ -0.12
CSTF3-203ENST00000438862 H7C1W4 665 aa14.28□□□□□ -0.12
CSTF3-203ENST00000438862 FCGRTP55899 365 aa14.28□□□□□ -0.12
CSTF3-203ENST00000438862 PPATQ06203 517 aa14.28□□□□□ -0.12
CSTF3-203ENST00000438862 NECAB2Q7Z6G3 386 aa14.28□□□□□ -0.12
CSTF3-203ENST00000438862 DZIP1LQ8IYY4 767 aaKnown RBP14.28□□□□□ -0.12
CSTF3-203ENST00000438862 PLA2G12BQ9BX93 195 aa14.28□□□□□ -0.12
CSTF3-203ENST00000438862 TTF2Q9UNY4 1162 aaKnown RBP14.28□□□□□ -0.12
CSTF3-203ENST00000438862 ARAP2Q8WZ64 1704 aa14.27□□□□□ -0.12
CSTF3-203ENST00000438862 FAM205AQ6ZU69 1335 aa14.27□□□□□ -0.12
CSTF3-203ENST00000438862 ADGRA2Q96PE1 1338 aa14.27□□□□□ -0.12
CSTF3-203ENST00000438862 PDHXO00330 501 aa14.27□□□□□ -0.13
CSTF3-203ENST00000438862 ADCY3O60266 1144 aa14.27□□□□□ -0.13
CSTF3-203ENST00000438862 CSF1RP07333 972 aa14.27□□□□□ -0.13
CSTF3-203ENST00000438862 BCAMP50895 628 aa14.27□□□□□ -0.13
CSTF3-203ENST00000438862 PRKCZQ05513 592 aa14.27□□□□□ -0.13
CSTF3-203ENST00000438862 TDHQ8IZJ6 230 aa14.27□□□□□ -0.13
CSTF3-203ENST00000438862 ZNF710Q8N1W2 664 aa14.27□□□□□ -0.13
CSTF3-203ENST00000438862 PXYLP1Q8TE99 480 aa14.27□□□□□ -0.13
CSTF3-203ENST00000438862 ZKSCAN4Q969J2 545 aaPredicted RBP14.27□□□□□ -0.13
CSTF3-203ENST00000438862 PAWRQ96IZ0 340 aaKnown RBP14.27□□□□□ -0.13
CSTF3-203ENST00000438862 DEFB118Q96PH6 123 aa14.27□□□□□ -0.13
CSTF3-203ENST00000438862 WRNIP1Q96S55 665 aa14.27□□□□□ -0.13
CSTF3-203ENST00000438862 MBIPQ9NS73 344 aa14.27□□□□□ -0.13
CSTF3-203ENST00000438862 PI4KAP2A4QPH2 592 aa14.26□□□□□ -0.13
CSTF3-203ENST00000438862 SNAP23O00161 211 aa14.26□□□□□ -0.13
CSTF3-203ENST00000438862 TAF5LO75529 589 aa14.26□□□□□ -0.13
CSTF3-203ENST00000438862 MFSD14BQ5SR56 506 aa14.26□□□□□ -0.13
CSTF3-203ENST00000438862 UBE3BQ7Z3V4 1068 aa14.26□□□□□ -0.13
CSTF3-203ENST00000438862 PI4KAP1Q8N8J0 262 aa14.26□□□□□ -0.13
CSTF3-203ENST00000438862 CRISPLD2Q9H0B8 497 aa14.26□□□□□ -0.13
CSTF3-203ENST00000438862 PRDM6Q9NQX0 595 aa14.26□□□□□ -0.13
CSTF3-203ENST00000438862 JAG2Q9Y219 1238 aa14.26□□□□□ -0.13
CSTF3-203ENST00000438862 MGAMO43451 1857 aa14.25□□□□□ -0.13
CSTF3-203ENST00000438862 ANKRD18BA2A2Z9 1011 aa14.25□□□□□ -0.13
CSTF3-203ENST00000438862 NEURL1BA8MQ27 555 aa14.25□□□□□ -0.13
CSTF3-203ENST00000438862 CCDC30Q5VVM6 783 aa14.25□□□□□ -0.13
CSTF3-203ENST00000438862 DCAF15Q66K64 600 aa14.25□□□□□ -0.13
CSTF3-203ENST00000438862 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.25□□□□□ -0.13
CSTF3-203ENST00000438862 ANKLE1Q8NAG6 615 aa14.25□□□□□ -0.13
CSTF3-203ENST00000438862 PAK6Q9NQU5 681 aaPredicted RBP14.25□□□□□ -0.13
CSTF3-203ENST00000438862 GABRQQ9UN88 632 aa14.25□□□□□ -0.13
CSTF3-203ENST00000438862 ALPK3Q96L96 1907 aa14.25□□□□□ -0.13
CSTF3-203ENST00000438862 ELL2O00472 640 aaPredicted RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms