RNA–Protein interactions for RNA: ENST00000434728.1

CDC42EP1-204, Transcript of CDC42 effector protein 1, humanhuman

TSL 4

Gene CDC42EP1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-204ENST00000434728 APOBEC3HQ6NTF7 200 aaKnown RBP16.73■□□□□ 0.27
CDC42EP1-204ENST00000434728 HHIPL2Q6UWX4 724 aa16.73■□□□□ 0.27
CDC42EP1-204ENST00000434728 MIGA2Q7L4E1 593 aa16.73■□□□□ 0.27
CDC42EP1-204ENST00000434728 LPIN2Q92539 896 aa16.73■□□□□ 0.27
CDC42EP1-204ENST00000434728 ZCCHC17Q9NP64 241 aaKnown RBP16.73■□□□□ 0.27
CDC42EP1-204ENST00000434728 GNL3LQ9NVN8 582 aaKnown RBP16.73■□□□□ 0.27
CDC42EP1-204ENST00000434728 RPAP1Q9BWH6 1393 aaPredicted RBP16.73■□□□□ 0.27
CDC42EP1-204ENST00000434728 CEP290O15078 2479 aa16.72■□□□□ 0.27
CDC42EP1-204ENST00000434728 E9PSI1 815 aa16.72■□□□□ 0.27
CDC42EP1-204ENST00000434728 EYA2O00167 538 aa16.72■□□□□ 0.27
CDC42EP1-204ENST00000434728 LACTBP83111 547 aaPredicted RBP16.72■□□□□ 0.27
CDC42EP1-204ENST00000434728 TCP10Q12799 353 aa16.72■□□□□ 0.27
CDC42EP1-204ENST00000434728 HABP4Q5JVS0 413 aaKnown RBP16.72■□□□□ 0.27
CDC42EP1-204ENST00000434728 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.72■□□□□ 0.27
CDC42EP1-204ENST00000434728 USP44Q9H0E7 712 aa16.72■□□□□ 0.27
CDC42EP1-204ENST00000434728 BRCA2P51587 3418 aa16.71■□□□□ 0.27
CDC42EP1-204ENST00000434728 GNRH1P01148 92 aa16.71■□□□□ 0.27
CDC42EP1-204ENST00000434728 LDHBP07195 334 aaKnown RBP16.71■□□□□ 0.27
CDC42EP1-204ENST00000434728 CAP1Q01518 475 aa16.71■□□□□ 0.27
CDC42EP1-204ENST00000434728 PPATQ06203 517 aa16.71■□□□□ 0.27
CDC42EP1-204ENST00000434728 SH3TC2Q8TF17 1288 aa16.71■□□□□ 0.27
CDC42EP1-204ENST00000434728 FAM151AQ8WW52 585 aa16.71■□□□□ 0.27
CDC42EP1-204ENST00000434728 SSH1Q8WYL5 1049 aa16.71■□□□□ 0.27
CDC42EP1-204ENST00000434728 SIL1Q9H173 461 aa16.71■□□□□ 0.27
CDC42EP1-204ENST00000434728 SMC4Q9NTJ3 1288 aa16.71■□□□□ 0.27
CDC42EP1-204ENST00000434728 UBTFL1P0CB47 393 aaPredicted RBP16.7■□□□□ 0.26
CDC42EP1-204ENST00000434728 FGFR2P21802 821 aa16.7■□□□□ 0.26
CDC42EP1-204ENST00000434728 INPP5BP32019 993 aa16.7■□□□□ 0.26
CDC42EP1-204ENST00000434728 ATP2B3Q16720 1220 aa16.7■□□□□ 0.26
CDC42EP1-204ENST00000434728 ARHGAP39Q9C0H5 1083 aa16.7■□□□□ 0.26
CDC42EP1-204ENST00000434728 CEP126Q9P2H0 1117 aa16.7■□□□□ 0.26
CDC42EP1-204ENST00000434728 ZSWIM8A7E2V4 1837 aa16.7■□□□□ 0.26
CDC42EP1-204ENST00000434728 FMNL1O95466 1100 aaPredicted RBP16.69■□□□□ 0.26
CDC42EP1-204ENST00000434728 HOXD10P28358 340 aa16.69■□□□□ 0.26
CDC42EP1-204ENST00000434728 PRMT2P55345 433 aa16.69■□□□□ 0.26
CDC42EP1-204ENST00000434728 DIXDC1Q155Q3 683 aa16.69■□□□□ 0.26
CDC42EP1-204ENST00000434728 RAET1EQ8TD07 263 aa16.69■□□□□ 0.26
CDC42EP1-204ENST00000434728 CPA4Q9UI42 421 aa16.69■□□□□ 0.26
CDC42EP1-204ENST00000434728 DAGLAQ9Y4D2 1042 aa16.69■□□□□ 0.26
CDC42EP1-204ENST00000434728 ZNF521Q96K83 1311 aa16.69■□□□□ 0.26
CDC42EP1-204ENST00000434728 PDHXO00330 501 aa16.68■□□□□ 0.26
CDC42EP1-204ENST00000434728 PRDX5P30044 214 aa16.68■□□□□ 0.26
CDC42EP1-204ENST00000434728 USP40Q9NVE5 1235 aa16.68■□□□□ 0.26
CDC42EP1-204ENST00000434728 BIN2Q9UBW5 565 aaPredicted RBP16.68■□□□□ 0.26
CDC42EP1-204ENST00000434728 HDAC5Q9UQL6 1122 aa16.68■□□□□ 0.26
CDC42EP1-204ENST00000434728 PSMC4P43686 418 aa16.67■□□□□ 0.26
CDC42EP1-204ENST00000434728 CDC42EP5Q6NZY7 148 aa16.67■□□□□ 0.26
CDC42EP1-204ENST00000434728 ANKRD23Q86SG2 305 aa16.67■□□□□ 0.26
CDC42EP1-204ENST00000434728 ZSCAN29Q8IWY8 852 aaPredicted RBP16.67■□□□□ 0.26
CDC42EP1-204ENST00000434728 DENND2AQ9ULE3 1009 aa16.67■□□□□ 0.26
CDC42EP1-204ENST00000434728 ALDH1L2Q3SY69 923 aa16.66■□□□□ 0.26
CDC42EP1-204ENST00000434728 DZIP1Q86YF9 867 aaKnown RBP16.66■□□□□ 0.26
CDC42EP1-204ENST00000434728 ZGPATQ8N5A5 531 aaKnown RBP16.66■□□□□ 0.26
CDC42EP1-204ENST00000434728 PARK7Q99497 189 aaKnown RBP16.66■□□□□ 0.26
CDC42EP1-204ENST00000434728 PICK1Q9NRD5 415 aa16.66■□□□□ 0.26
CDC42EP1-204ENST00000434728 MYH2Q9UKX2 1941 aa16.65■□□□□ 0.26
CDC42EP1-204ENST00000434728 CIAO1O76071 339 aa16.65■□□□□ 0.26
CDC42EP1-204ENST00000434728 RFX5P48382 616 aaPredicted RBP16.65■□□□□ 0.26
CDC42EP1-204ENST00000434728 NFIAQ12857 509 aa16.65■□□□□ 0.26
CDC42EP1-204ENST00000434728 ATG9AQ7Z3C6 839 aa16.65■□□□□ 0.26
CDC42EP1-204ENST00000434728 SRRDQ9UH36 339 aa16.65■□□□□ 0.26
CDC42EP1-204ENST00000434728 FBXO3Q9UK99 471 aa16.65■□□□□ 0.26
CDC42EP1-204ENST00000434728 DOCK2Q92608 1830 aa16.65■□□□□ 0.26
CDC42EP1-204ENST00000434728 SEMA3EO15041 775 aa16.64■□□□□ 0.25
CDC42EP1-204ENST00000434728 GRK4P32298 578 aa16.64■□□□□ 0.25
CDC42EP1-204ENST00000434728 C17orf99Q6UX52 265 aa16.64■□□□□ 0.25
CDC42EP1-204ENST00000434728 SLF2Q8IX21 1173 aa16.64■□□□□ 0.25
CDC42EP1-204ENST00000434728 NKX2-3Q8TAU0 364 aa16.64■□□□□ 0.25
CDC42EP1-204ENST00000434728 TRIM47Q96LD4 638 aa16.64■□□□□ 0.25
CDC42EP1-204ENST00000434728 ZNF112Q9UJU3 913 aa16.64■□□□□ 0.25
CDC42EP1-204ENST00000434728 KCNH4Q9UQ05 1017 aa16.64■□□□□ 0.25
CDC42EP1-204ENST00000434728 MYPNQ86TC9 1320 aa16.64■□□□□ 0.25
CDC42EP1-204ENST00000434728 OSBPP22059 807 aa16.63■□□□□ 0.25
CDC42EP1-204ENST00000434728 IL15P40933 162 aaPredicted RBP16.63■□□□□ 0.25
CDC42EP1-204ENST00000434728 PHKA1P46020 1223 aa16.63■□□□□ 0.25
CDC42EP1-204ENST00000434728 FCGRTP55899 365 aa16.63■□□□□ 0.25
CDC42EP1-204ENST00000434728 UBXN2AP68543 259 aa16.63■□□□□ 0.25
CDC42EP1-204ENST00000434728 SLFN5Q08AF3 891 aa16.63■□□□□ 0.25
CDC42EP1-204ENST00000434728 NOL9Q5SY16 702 aaKnown RBP16.63■□□□□ 0.25
CDC42EP1-204ENST00000434728 GADL1Q6ZQY3 521 aa16.63■□□□□ 0.25
CDC42EP1-204ENST00000434728 DPF3Q92784 378 aa16.63■□□□□ 0.25
CDC42EP1-204ENST00000434728 ABCF2Q9UG63 623 aa16.63■□□□□ 0.25
CDC42EP1-204ENST00000434728 LRRFIP2Q9Y608 721 aaKnown RBP16.63■□□□□ 0.25
CDC42EP1-204ENST00000434728 TRIOBPQ9H2D6 2365 aa16.62■□□□□ 0.25
CDC42EP1-204ENST00000434728 CCER2I3L3R5 266 aa16.62■□□□□ 0.25
CDC42EP1-204ENST00000434728 RGS3P49796 1198 aa16.62■□□□□ 0.25
CDC42EP1-204ENST00000434728 FASTKD5Q7L8L6 764 aaKnown RBP16.62■□□□□ 0.25
CDC42EP1-204ENST00000434728 API5Q9BZZ5 524 aaKnown RBP16.62■□□□□ 0.25
CDC42EP1-204ENST00000434728 FAM198AQ9UFP1 575 aa16.62■□□□□ 0.25
CDC42EP1-204ENST00000434728 COLQQ9Y215 455 aaPredicted RBP16.62■□□□□ 0.25
CDC42EP1-204ENST00000434728 ZHX2Q9Y6X8 837 aa16.62■□□□□ 0.25
CDC42EP1-204ENST00000434728 SALL1Q9NSC2 1324 aa16.62■□□□□ 0.25
CDC42EP1-204ENST00000434728 CXCL11O14625 94 aa16.61■□□□□ 0.25
CDC42EP1-204ENST00000434728 PICALMQ13492 652 aa16.61■□□□□ 0.25
CDC42EP1-204ENST00000434728 MTFR1Q15390 333 aa16.61■□□□□ 0.25
CDC42EP1-204ENST00000434728 SPTY2D1Q68D10 685 aaPredicted RBP16.61■□□□□ 0.25
CDC42EP1-204ENST00000434728 SCYL3Q8IZE3 742 aa16.61■□□□□ 0.25
CDC42EP1-204ENST00000434728 SMCR8Q8TEV9 937 aaPredicted RBP16.61■□□□□ 0.25
CDC42EP1-204ENST00000434728 RNF208Q9H0X6 261 aa16.61■□□□□ 0.25
CDC42EP1-204ENST00000434728 PA2G4Q9UQ80 394 aaKnown RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms