RNA–Protein interactions for RNA: ENST00000434658.6

FAM3A-212, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,817 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-212ENST00000434658 SMARCC2Q8TAQ2 1214 aa21.83■■□□□ 1.09
FAM3A-212ENST00000434658 SCAND2PQ9GZW5 306 aaPredicted RBP21.83■■□□□ 1.09
FAM3A-212ENST00000434658 PODXL2Q9NZ53 605 aa21.83■■□□□ 1.09
FAM3A-212ENST00000434658 POLLQ9UGP5 575 aa21.83■■□□□ 1.09
FAM3A-212ENST00000434658 NOL7Q9UMY1 257 aaKnown RBP21.83■■□□□ 1.09
FAM3A-212ENST00000434658 MYH15Q9Y2K3 1946 aa21.83■■□□□ 1.09
FAM3A-212ENST00000434658 AKAP11Q9UKA4 1901 aa21.83■■□□□ 1.08
FAM3A-212ENST00000434658 E7EWF7 191 aa21.83■■□□□ 1.08
FAM3A-212ENST00000434658 C6orf229H3BNL8 230 aa21.83■■□□□ 1.08
FAM3A-212ENST00000434658 TBC1D16Q8TBP0 767 aa21.83■■□□□ 1.08
FAM3A-212ENST00000434658 OSBP2Q969R2 916 aa21.83■■□□□ 1.08
FAM3A-212ENST00000434658 FUCA2Q9BTY2 467 aa21.83■■□□□ 1.08
FAM3A-212ENST00000434658 PPIP5K2O43314 1243 aa21.82■■□□□ 1.08
FAM3A-212ENST00000434658 MSNP26038 577 aaKnown RBP21.82■■□□□ 1.08
FAM3A-212ENST00000434658 FGD1P98174 961 aa21.82■■□□□ 1.08
FAM3A-212ENST00000434658 SCRN1Q12765 414 aa21.82■■□□□ 1.08
FAM3A-212ENST00000434658 LARGE2Q8N3Y3 721 aa21.82■■□□□ 1.08
FAM3A-212ENST00000434658 VPS33BQ9H267 617 aa21.82■■□□□ 1.08
FAM3A-212ENST00000434658 CCDC39Q9UFE4 941 aa21.82■■□□□ 1.08
FAM3A-212ENST00000434658 RIPOR2Q9Y4F9 1068 aa21.82■■□□□ 1.08
FAM3A-212ENST00000434658 XDHP47989 1333 aa21.82■■□□□ 1.08
FAM3A-212ENST00000434658 AOC3Q16853 763 aa21.81■■□□□ 1.08
FAM3A-212ENST00000434658 GGA1Q9UJY5 639 aa21.81■■□□□ 1.08
FAM3A-212ENST00000434658 RESTQ13127 1097 aa21.8■■□□□ 1.08
FAM3A-212ENST00000434658 ATP2B3Q16720 1220 aa21.8■■□□□ 1.08
FAM3A-212ENST00000434658 JDP2Q8WYK2 163 aa21.8■■□□□ 1.08
FAM3A-212ENST00000434658 LRRC2Q9BYS8 371 aa21.8■■□□□ 1.08
FAM3A-212ENST00000434658 DUOX1Q9NRD9 1551 aa21.8■■□□□ 1.08
FAM3A-212ENST00000434658 DICER1Q9UPY3 1922 aaKnown RBP21.8■■□□□ 1.08
FAM3A-212ENST00000434658 UFL1O94874 794 aa21.8■■□□□ 1.08
FAM3A-212ENST00000434658 CHRNDQ07001 517 aa21.8■■□□□ 1.08
FAM3A-212ENST00000434658 WASHC4Q2M389 1173 aa21.8■■□□□ 1.08
FAM3A-212ENST00000434658 FAM173BQ6P4H8 233 aa21.8■■□□□ 1.08
FAM3A-212ENST00000434658 FBXL16Q8N461 479 aa21.8■■□□□ 1.08
FAM3A-212ENST00000434658 ANKRD2Q9GZV1 360 aa21.8■■□□□ 1.08
FAM3A-212ENST00000434658 CTNNA3Q9UI47 895 aa21.8■■□□□ 1.08
FAM3A-212ENST00000434658 ZC3H4Q9UPT8 1303 aaKnown RBP21.79■■□□□ 1.08
FAM3A-212ENST00000434658 ATP2B4P23634 1241 aa21.79■■□□□ 1.08
FAM3A-212ENST00000434658 KIAA2012Q0VF49 1180 aa21.79■■□□□ 1.08
FAM3A-212ENST00000434658 SCARF1Q14162 830 aa21.79■■□□□ 1.08
FAM3A-212ENST00000434658 METTL24Q5JXM2 366 aa21.79■■□□□ 1.08
FAM3A-212ENST00000434658 ZNF512BQ96KM6 892 aaPredicted RBP21.79■■□□□ 1.08
FAM3A-212ENST00000434658 GPR101Q96P66 508 aaPredicted RBP21.79■■□□□ 1.08
FAM3A-212ENST00000434658 EYA3Q99504 573 aa21.79■■□□□ 1.08
FAM3A-212ENST00000434658 RIMBP2O15034 1052 aa21.78■■□□□ 1.08
FAM3A-212ENST00000434658 MCM5P33992 734 aa21.78■■□□□ 1.08
FAM3A-212ENST00000434658 HMGN5P82970 282 aaKnown RBP21.78■■□□□ 1.08
FAM3A-212ENST00000434658 TPRNQ4KMQ1 711 aa21.78■■□□□ 1.08
FAM3A-212ENST00000434658 NSUN7Q8NE18 718 aaKnown RBP21.78■■□□□ 1.08
FAM3A-212ENST00000434658 ZNF526Q8TF50 670 aaPredicted RBP21.78■■□□□ 1.08
FAM3A-212ENST00000434658 APPBP2Q92624 585 aa21.78■■□□□ 1.08
FAM3A-212ENST00000434658 ZSCAN16Q9H4T2 348 aaPredicted RBP21.78■■□□□ 1.08
FAM3A-212ENST00000434658 LTBP1Q14766 1721 aa21.78■■□□□ 1.08
FAM3A-212ENST00000434658 ARAP2Q8WZ64 1704 aa21.78■■□□□ 1.08
FAM3A-212ENST00000434658 WTIPA6NIX2 430 aaPredicted RBP21.78■■□□□ 1.08
FAM3A-212ENST00000434658 FOXP2O15409 715 aa21.78■■□□□ 1.08
FAM3A-212ENST00000434658 ZAP70P43403 619 aa21.78■■□□□ 1.08
FAM3A-212ENST00000434658 APOBRQ0VD83 1088 aa21.78■■□□□ 1.08
FAM3A-212ENST00000434658 ZNF784Q8NCA9 323 aaPredicted RBP21.78■■□□□ 1.08
FAM3A-212ENST00000434658 HELBQ8NG08 1087 aaPredicted RBP21.78■■□□□ 1.08
FAM3A-212ENST00000434658 LEO1Q8WVC0 666 aaPredicted RBP21.78■■□□□ 1.08
FAM3A-212ENST00000434658 ZNF274Q96GC6 653 aaPredicted RBP21.78■■□□□ 1.08
FAM3A-212ENST00000434658 SPATA32Q96LK8 384 aa21.78■■□□□ 1.08
FAM3A-212ENST00000434658 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.78■■□□□ 1.08
FAM3A-212ENST00000434658 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.78■■□□□ 1.08
FAM3A-212ENST00000434658 TIAM2Q8IVF5 1701 aa21.78■■□□□ 1.08
FAM3A-212ENST00000434658 GIMAP6Q6P9H5 292 aa21.77■■□□□ 1.08
FAM3A-212ENST00000434658 NIM1KQ8IY84 436 aa21.77■■□□□ 1.08
FAM3A-212ENST00000434658 VGLL2Q8N8G2 317 aa21.77■■□□□ 1.08
FAM3A-212ENST00000434658 CHMP4CQ96CF2 233 aa21.77■■□□□ 1.08
FAM3A-212ENST00000434658 ZC3H12CQ9C0D7 883 aaKnown RBP21.77■■□□□ 1.08
FAM3A-212ENST00000434658 ZKSCAN5Q9Y2L8 839 aa21.77■■□□□ 1.08
FAM3A-212ENST00000434658 KIF3AQ9Y496 699 aa21.77■■□□□ 1.08
FAM3A-212ENST00000434658 H3BQV1 296 aa21.76■■□□□ 1.07
FAM3A-212ENST00000434658 CTDNEP1O95476 244 aa21.76■■□□□ 1.07
FAM3A-212ENST00000434658 IFFO2Q5TF58 517 aa21.76■■□□□ 1.07
FAM3A-212ENST00000434658 NAA16Q6N069 864 aaPredicted RBP21.76■■□□□ 1.07
FAM3A-212ENST00000434658 LEMD3Q9Y2U8 911 aa21.76■■□□□ 1.07
FAM3A-212ENST00000434658 COL4A5P29400 1685 aa21.76■■□□□ 1.07
FAM3A-212ENST00000434658 FZD9O00144 591 aa21.76■■□□□ 1.07
FAM3A-212ENST00000434658 ZNF500O60304 480 aaPredicted RBP21.76■■□□□ 1.07
FAM3A-212ENST00000434658 EVCP57679 992 aa21.76■■□□□ 1.07
FAM3A-212ENST00000434658 TTLL5Q6EMB2 1281 aa21.76■■□□□ 1.07
FAM3A-212ENST00000434658 DPY19L2Q6NUT2 758 aa21.76■■□□□ 1.07
FAM3A-212ENST00000434658 DDX11Q96FC9 970 aa21.76■■□□□ 1.07
FAM3A-212ENST00000434658 SALL1Q9NSC2 1324 aa21.75■■□□□ 1.07
FAM3A-212ENST00000434658 A0A1B0GUL6 1792 aa21.75■■□□□ 1.07
FAM3A-212ENST00000434658 PTPDC1A2A3K4 754 aa21.75■■□□□ 1.07
FAM3A-212ENST00000434658 IMMTQ16891 758 aaKnown RBP21.75■■□□□ 1.07
FAM3A-212ENST00000434658 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.75■■□□□ 1.076e-7■■■■□ 22.7
FAM3A-212ENST00000434658 MROH5Q6ZUA9 1318 aa21.75■■□□□ 1.07
FAM3A-212ENST00000434658 GLTPD2A6NH11 291 aa21.74■■□□□ 1.07
FAM3A-212ENST00000434658 LIG1P18858 919 aa21.74■■□□□ 1.07
FAM3A-212ENST00000434658 MCAMP43121 646 aa21.74■■□□□ 1.07
FAM3A-212ENST00000434658 NUP62CLQ9H1M0 184 aa21.74■■□□□ 1.07
FAM3A-212ENST00000434658 TFIP11Q9UBB9 837 aaKnown RBP21.74■■□□□ 1.07
FAM3A-212ENST00000434658 ZNF804BA4D1E1 1349 aa21.74■■□□□ 1.07
FAM3A-212ENST00000434658 PDIA3P30101 505 aaKnown RBP21.73■■□□□ 1.07
FAM3A-212ENST00000434658 NAP1L5Q96NT1 182 aaPredicted RBP21.73■■□□□ 1.07
FAM3A-212ENST00000434658 ZNRF3Q9ULT6 936 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms