RNA–Protein interactions for RNA: ENST00000434101.6

TRAPPC4-202, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 794 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-202ENST00000434101 SLC10A4Q96EP9 437 aa16.21■□□□□ 0.19
TRAPPC4-202ENST00000434101 TEPSINQ96N21 525 aa16.21■□□□□ 0.19
TRAPPC4-202ENST00000434101 DBNDD2Q9BQY9 259 aa16.21■□□□□ 0.19
TRAPPC4-202ENST00000434101 EXOC6BQ9Y2D4 811 aa16.21■□□□□ 0.19
TRAPPC4-202ENST00000434101 RPAP1Q9BWH6 1393 aaPredicted RBP16.21■□□□□ 0.19
TRAPPC4-202ENST00000434101 CASP8AP2Q9UKL3 1982 aa16.2■□□□□ 0.18
TRAPPC4-202ENST00000434101 USP2O75604 605 aaPredicted RBP16.2■□□□□ 0.18
TRAPPC4-202ENST00000434101 MCAMP43121 646 aa16.2■□□□□ 0.18
TRAPPC4-202ENST00000434101 GSTO1P78417 241 aa16.2■□□□□ 0.18
TRAPPC4-202ENST00000434101 CDC42EP5Q6NZY7 148 aa16.2■□□□□ 0.18
TRAPPC4-202ENST00000434101 ANKRD13AQ8IZ07 590 aa16.2■□□□□ 0.18
TRAPPC4-202ENST00000434101 ZNF512BQ96KM6 892 aaPredicted RBP16.2■□□□□ 0.18
TRAPPC4-202ENST00000434101 YTHDC1Q96MU7 727 aaKnown RBP16.2■□□□□ 0.18
TRAPPC4-202ENST00000434101 CSRNP1Q96S65 589 aa16.2■□□□□ 0.18
TRAPPC4-202ENST00000434101 SAGE1Q9NXZ1 904 aa16.2■□□□□ 0.18
TRAPPC4-202ENST00000434101 FZD1Q9UP38 647 aa16.2■□□□□ 0.18
TRAPPC4-202ENST00000434101 GAKO14976 1311 aa16.19■□□□□ 0.18
TRAPPC4-202ENST00000434101 MYO5AQ9Y4I1 1855 aaKnown RBP16.19■□□□□ 0.18
TRAPPC4-202ENST00000434101 LDHCP07864 332 aa16.19■□□□□ 0.18
TRAPPC4-202ENST00000434101 C20orf194Q5TEA3 1177 aa16.19■□□□□ 0.18
TRAPPC4-202ENST00000434101 PI16Q6UXB8 463 aa16.19■□□□□ 0.18
TRAPPC4-202ENST00000434101 TNS4Q8IZW8 715 aa16.19■□□□□ 0.18
TRAPPC4-202ENST00000434101 FAM163AQ96GL9 167 aaPredicted RBP16.19■□□□□ 0.18
TRAPPC4-202ENST00000434101 USP40Q9NVE5 1235 aa16.19■□□□□ 0.18
TRAPPC4-202ENST00000434101 LAMB1P07942 1786 aa16.18■□□□□ 0.18
TRAPPC4-202ENST00000434101 MAST2Q6P0Q8 1798 aa16.18■□□□□ 0.18
TRAPPC4-202ENST00000434101 MECOMQ03112 1051 aa16.18■□□□□ 0.18
TRAPPC4-202ENST00000434101 SREBF2Q12772 1141 aa16.18■□□□□ 0.18
TRAPPC4-202ENST00000434101 SPRYD7Q5W111 196 aa16.18■□□□□ 0.18
TRAPPC4-202ENST00000434101 DCAF15Q66K64 600 aa16.18■□□□□ 0.18
TRAPPC4-202ENST00000434101 RHPN1Q8TCX5 695 aa16.18■□□□□ 0.18
TRAPPC4-202ENST00000434101 FAM151AQ8WW52 585 aa16.18■□□□□ 0.18
TRAPPC4-202ENST00000434101 EAF2Q96CJ1 260 aaPredicted RBP16.18■□□□□ 0.18
TRAPPC4-202ENST00000434101 KIF1BPQ96EK5 621 aa16.18■□□□□ 0.18
TRAPPC4-202ENST00000434101 CCDC8Q9H0W5 538 aaPredicted RBP16.18■□□□□ 0.18
TRAPPC4-202ENST00000434101 RAI14Q9P0K7 980 aa16.18■□□□□ 0.18
TRAPPC4-202ENST00000434101 LRP2BPQ9P2M1 347 aa16.18■□□□□ 0.18
TRAPPC4-202ENST00000434101 DBNLQ9UJU6 430 aaKnown RBP16.18■□□□□ 0.18
TRAPPC4-202ENST00000434101 MROH7-TTC4A0A0A0MT08 1334 aa16.18■□□□□ 0.18
TRAPPC4-202ENST00000434101 IGSF3O75054 1194 aa16.17■□□□□ 0.18
TRAPPC4-202ENST00000434101 RAB11FIP3O75154 756 aa16.17■□□□□ 0.18
TRAPPC4-202ENST00000434101 ZBTB48P10074 688 aaPredicted RBP16.17■□□□□ 0.18
TRAPPC4-202ENST00000434101 TBC1D9Q6ZT07 1266 aa16.17■□□□□ 0.18
TRAPPC4-202ENST00000434101 AACSQ86V21 672 aa16.17■□□□□ 0.18
TRAPPC4-202ENST00000434101 CDAN1Q8IWY9 1227 aa16.17■□□□□ 0.18
TRAPPC4-202ENST00000434101 SIRT2Q8IXJ6 389 aa16.17■□□□□ 0.18
TRAPPC4-202ENST00000434101 CLMNQ96JQ2 1002 aa16.17■□□□□ 0.18
TRAPPC4-202ENST00000434101 RNF186Q9NXI6 227 aa16.17■□□□□ 0.18
TRAPPC4-202ENST00000434101 TSKSQ9UJT2 592 aa16.17■□□□□ 0.18
TRAPPC4-202ENST00000434101 DOCK2Q92608 1830 aa16.17■□□□□ 0.18
TRAPPC4-202ENST00000434101 MAP4K4O95819 1239 aaPredicted RBP16.16■□□□□ 0.18
TRAPPC4-202ENST00000434101 BTDP43251 543 aa16.16■□□□□ 0.18
TRAPPC4-202ENST00000434101 TM4SF4P48230 202 aa16.16■□□□□ 0.18
TRAPPC4-202ENST00000434101 MAP3K9P80192 1104 aa16.16■□□□□ 0.18
TRAPPC4-202ENST00000434101 TCP10Q12799 353 aa16.16■□□□□ 0.18
TRAPPC4-202ENST00000434101 MKRN3Q13064 507 aaKnown RBP16.16■□□□□ 0.18
TRAPPC4-202ENST00000434101 IFFO2Q5TF58 517 aa16.16■□□□□ 0.18
TRAPPC4-202ENST00000434101 CLASRPQ8N2M8 674 aaKnown RBP16.16■□□□□ 0.18
TRAPPC4-202ENST00000434101 NSUN4Q96CB9 384 aaKnown RBP16.16■□□□□ 0.18
TRAPPC4-202ENST00000434101 WNK4Q96J92 1243 aa16.16■□□□□ 0.18
TRAPPC4-202ENST00000434101 IDI2Q9BXS1 227 aa16.16■□□□□ 0.18
TRAPPC4-202ENST00000434101 SNRKQ9NRH2 765 aa16.16■□□□□ 0.18
TRAPPC4-202ENST00000434101 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.16■□□□□ 0.18
TRAPPC4-202ENST00000434101 CSADQ9Y600 493 aa16.16■□□□□ 0.18
TRAPPC4-202ENST00000434101 GPR75-ASB3A0A0A6YYF3 556 aa16.15■□□□□ 0.18
TRAPPC4-202ENST00000434101 MANSC4A6NHS7 340 aaPredicted RBP16.15■□□□□ 0.18
TRAPPC4-202ENST00000434101 ENTPD3O75355 529 aa16.15■□□□□ 0.18
TRAPPC4-202ENST00000434101 TRPA1O75762 1119 aa16.15■□□□□ 0.18
TRAPPC4-202ENST00000434101 INHBEP58166 350 aa16.15■□□□□ 0.18
TRAPPC4-202ENST00000434101 NFIAQ12857 509 aa16.15■□□□□ 0.18
TRAPPC4-202ENST00000434101 NOL10Q9BSC4 688 aaKnown RBP16.15■□□□□ 0.18
TRAPPC4-202ENST00000434101 IL1RAPL2Q9NP60 686 aa16.15■□□□□ 0.18
TRAPPC4-202ENST00000434101 TLR7Q9NYK1 1049 aaKnown RBP16.15■□□□□ 0.18
TRAPPC4-202ENST00000434101 APBB1O00213 710 aa16.14■□□□□ 0.17
TRAPPC4-202ENST00000434101 RGS3P49796 1198 aa16.14■□□□□ 0.17
TRAPPC4-202ENST00000434101 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.14■□□□□ 0.17
TRAPPC4-202ENST00000434101 ZNF341Q9BYN7 854 aa16.14■□□□□ 0.17
TRAPPC4-202ENST00000434101 FAM198AQ9UFP1 575 aa16.14■□□□□ 0.17
TRAPPC4-202ENST00000434101 CYP2E1P05181 493 aaPredicted RBP16.13■□□□□ 0.17
TRAPPC4-202ENST00000434101 IFIT2P09913 472 aaKnown RBP16.13■□□□□ 0.17
TRAPPC4-202ENST00000434101 ZAP70P43403 619 aa16.13■□□□□ 0.17
TRAPPC4-202ENST00000434101 RRP1P56182 461 aaKnown RBP16.13■□□□□ 0.17
TRAPPC4-202ENST00000434101 VGLL4Q14135 290 aa16.13■□□□□ 0.17
TRAPPC4-202ENST00000434101 NAA16Q6N069 864 aaPredicted RBP16.13■□□□□ 0.17
TRAPPC4-202ENST00000434101 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.13■□□□□ 0.17
TRAPPC4-202ENST00000434101 ZNF384Q8TF68 577 aa16.13■□□□□ 0.17
TRAPPC4-202ENST00000434101 WRNIP1Q96S55 665 aa16.13■□□□□ 0.17
TRAPPC4-202ENST00000434101 ELP3Q9H9T3 547 aa16.13■□□□□ 0.17
TRAPPC4-202ENST00000434101 RFX7Q2KHR2 1363 aa16.13■□□□□ 0.17
TRAPPC4-202ENST00000434101 NPM3O75607 178 aaKnown RBP16.12■□□□□ 0.17
TRAPPC4-202ENST00000434101 BAG3O95817 575 aa16.12■□□□□ 0.17
TRAPPC4-202ENST00000434101 ALDH1A1P00352 501 aa16.12■□□□□ 0.17
TRAPPC4-202ENST00000434101 PLCG2P16885 1265 aa16.12■□□□□ 0.17
TRAPPC4-202ENST00000434101 ZSCAN29Q8IWY8 852 aaPredicted RBP16.12■□□□□ 0.17
TRAPPC4-202ENST00000434101 OPTNQ96CV9 577 aa16.12■□□□□ 0.17
TRAPPC4-202ENST00000434101 CDK5RAP2Q96SN8 1893 aa16.12■□□□□ 0.17
TRAPPC4-202ENST00000434101 WDHD1O75717 1129 aaPredicted RBP16.11■□□□□ 0.17
TRAPPC4-202ENST00000434101 RHBDL3P58872 404 aa16.11■□□□□ 0.17
TRAPPC4-202ENST00000434101 PICALMQ13492 652 aa16.11■□□□□ 0.17
TRAPPC4-202ENST00000434101 OTUD7BQ6GQQ9 843 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms