RNA–Protein interactions for RNA: ENST00000432877.5

CNOT9-204, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 3

Gene CNOT9, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-204ENST00000432877 KLHDC4Q8TBB5 520 aa21.96■■□□□ 1.11
CNOT9-204ENST00000432877 FBXO3Q9UK99 471 aa21.96■■□□□ 1.11
CNOT9-204ENST00000432877 E9PSI1 815 aa21.95■■□□□ 1.1
CNOT9-204ENST00000432877 C17orf99Q6UX52 265 aa21.95■■□□□ 1.1
CNOT9-204ENST00000432877 ZNF112Q9UJU3 913 aa21.95■■□□□ 1.1
CNOT9-204ENST00000432877 ZNF316A6NFI3 1004 aaPredicted RBP21.94■■□□□ 1.1
CNOT9-204ENST00000432877 HOXD10P28358 340 aa21.94■■□□□ 1.1
CNOT9-204ENST00000432877 ZEB1P37275 1124 aaPredicted RBP21.94■■□□□ 1.1
CNOT9-204ENST00000432877 MIGA2Q7L4E1 593 aa21.94■■□□□ 1.1
CNOT9-204ENST00000432877 ANKRD23Q86SG2 305 aa21.94■■□□□ 1.1
CNOT9-204ENST00000432877 GNL3LQ9NVN8 582 aaKnown RBP21.94■■□□□ 1.1
CNOT9-204ENST00000432877 RFX5P48382 616 aaPredicted RBP21.93■■□□□ 1.1
CNOT9-204ENST00000432877 SSH1Q8WYL5 1049 aa21.93■■□□□ 1.1
CNOT9-204ENST00000432877 KCNH4Q9UQ05 1017 aa21.93■■□□□ 1.1
CNOT9-204ENST00000432877 ARAP2Q8WZ64 1704 aa21.92■■□□□ 1.1
CNOT9-204ENST00000432877 ZBTB22O15209 634 aa21.92■■□□□ 1.1
CNOT9-204ENST00000432877 ARHGAP39Q9C0H5 1083 aa21.92■■□□□ 1.1
CNOT9-204ENST00000432877 HDAC5Q9UQL6 1122 aa21.92■■□□□ 1.1
CNOT9-204ENST00000432877 KIAA0100Q14667 2235 aaKnown RBP21.92■■□□□ 1.1
CNOT9-204ENST00000432877 MKI67P46013 3256 aaKnown RBP21.92■■□□□ 1.1
CNOT9-204ENST00000432877 OTOFQ9HC10 1997 aa21.91■■□□□ 1.1
CNOT9-204ENST00000432877 INPP5BP32019 993 aa21.91■■□□□ 1.1
CNOT9-204ENST00000432877 ALDH1L2Q3SY69 923 aa21.91■■□□□ 1.1
CNOT9-204ENST00000432877 NOL9Q5SY16 702 aaKnown RBP21.91■■□□□ 1.1
CNOT9-204ENST00000432877 CDC42EP5Q6NZY7 148 aa21.91■■□□□ 1.1
CNOT9-204ENST00000432877 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.91■■□□□ 1.1
CNOT9-204ENST00000432877 DAGLAQ9Y4D2 1042 aa21.91■■□□□ 1.1
CNOT9-204ENST00000432877 RBBP6Q7Z6E9 1792 aaKnown RBP21.9■■□□□ 1.1
CNOT9-204ENST00000432877 CXCL11O14625 94 aa21.9■■□□□ 1.1
CNOT9-204ENST00000432877 SEMA3EO15041 775 aa21.9■■□□□ 1.1
CNOT9-204ENST00000432877 CIAO1O76071 339 aa21.9■■□□□ 1.1
CNOT9-204ENST00000432877 ATG9AQ7Z3C6 839 aa21.9■■□□□ 1.1
CNOT9-204ENST00000432877 CEP126Q9P2H0 1117 aa21.9■■□□□ 1.1
CNOT9-204ENST00000432877 SRRDQ9UH36 339 aa21.9■■□□□ 1.1
CNOT9-204ENST00000432877 CENPFP49454 3210 aa21.9■■□□□ 1.1
CNOT9-204ENST00000432877 SALL1Q9NSC2 1324 aa21.89■■□□□ 1.1
CNOT9-204ENST00000432877 PDHXO00330 501 aa21.89■■□□□ 1.09
CNOT9-204ENST00000432877 LDHBP07195 334 aaKnown RBP21.89■■□□□ 1.09
CNOT9-204ENST00000432877 PSMC4P43686 418 aa21.89■■□□□ 1.09
CNOT9-204ENST00000432877 NKX2-3Q8TAU0 364 aa21.89■■□□□ 1.09
CNOT9-204ENST00000432877 SH3TC2Q8TF17 1288 aa21.89■■□□□ 1.09
CNOT9-204ENST00000432877 USP40Q9NVE5 1235 aa21.89■■□□□ 1.09
CNOT9-204ENST00000432877 DENND2AQ9ULE3 1009 aa21.89■■□□□ 1.09
CNOT9-204ENST00000432877 TCP10Q12799 353 aa21.88■■□□□ 1.09
CNOT9-204ENST00000432877 ZGPATQ8N5A5 531 aaKnown RBP21.88■■□□□ 1.09
CNOT9-204ENST00000432877 SLFN5Q08AF3 891 aa21.87■■□□□ 1.09
CNOT9-204ENST00000432877 ATP2B3Q16720 1220 aa21.87■■□□□ 1.09
CNOT9-204ENST00000432877 PARK7Q99497 189 aaKnown RBP21.87■■□□□ 1.09
CNOT9-204ENST00000432877 CPA4Q9UI42 421 aa21.87■■□□□ 1.09
CNOT9-204ENST00000432877 FMNL1O95466 1100 aaPredicted RBP21.86■■□□□ 1.09
CNOT9-204ENST00000432877 IL15P40933 162 aaPredicted RBP21.86■■□□□ 1.09
CNOT9-204ENST00000432877 NFIAQ12857 509 aa21.86■■□□□ 1.09
CNOT9-204ENST00000432877 DIXDC1Q155Q3 683 aa21.86■■□□□ 1.09
CNOT9-204ENST00000432877 RAET1EQ8TD07 263 aa21.86■■□□□ 1.09
CNOT9-204ENST00000432877 FAM198AQ9UFP1 575 aa21.86■■□□□ 1.09
CNOT9-204ENST00000432877 ADGRA2Q96PE1 1338 aa21.85■■□□□ 1.09
CNOT9-204ENST00000432877 MYCP01106 439 aaPredicted RBP21.85■■□□□ 1.09
CNOT9-204ENST00000432877 UBTFL1P0CB47 393 aaPredicted RBP21.85■■□□□ 1.09
CNOT9-204ENST00000432877 PRDX5P30044 214 aa21.85■■□□□ 1.09
CNOT9-204ENST00000432877 MOGSQ13724 837 aa21.85■■□□□ 1.09
CNOT9-204ENST00000432877 FASTKD5Q7L8L6 764 aaKnown RBP21.85■■□□□ 1.09
CNOT9-204ENST00000432877 TRIM47Q96LD4 638 aa21.85■■□□□ 1.09
CNOT9-204ENST00000432877 IDI2Q9BXS1 227 aa21.85■■□□□ 1.09
CNOT9-204ENST00000432877 ENTPD3O75355 529 aa21.84■■□□□ 1.09
CNOT9-204ENST00000432877 OSBPP22059 807 aa21.84■■□□□ 1.09
CNOT9-204ENST00000432877 GRK4P32298 578 aa21.84■■□□□ 1.09
CNOT9-204ENST00000432877 FXR1P51114 621 aaKnown RBP eCLIP21.84■■□□□ 1.09
CNOT9-204ENST00000432877 SLF2Q8IX21 1173 aa21.84■■□□□ 1.09
CNOT9-204ENST00000432877 COLQQ9Y215 455 aaPredicted RBP21.84■■□□□ 1.09
CNOT9-204ENST00000432877 CT47B1P0C2W7 299 aaPredicted RBP21.83■■□□□ 1.09
CNOT9-204ENST00000432877 CAPN2P17655 700 aa21.83■■□□□ 1.09
CNOT9-204ENST00000432877 CTGFP29279 349 aa21.83■■□□□ 1.09
CNOT9-204ENST00000432877 MAP3K10Q02779 954 aa21.83■■□□□ 1.09
CNOT9-204ENST00000432877 FAM163AQ96GL9 167 aaPredicted RBP21.83■■□□□ 1.09
CNOT9-204ENST00000432877 PICK1Q9NRD5 415 aa21.83■■□□□ 1.09
CNOT9-204ENST00000432877 SMC4Q9NTJ3 1288 aa21.83■■□□□ 1.09
CNOT9-204ENST00000432877 PHF20L1A8MW92 1017 aa21.82■■□□□ 1.08
CNOT9-204ENST00000432877 BCRP11274 1271 aa21.82■■□□□ 1.08
CNOT9-204ENST00000432877 FCGRTP55899 365 aa21.82■■□□□ 1.08
CNOT9-204ENST00000432877 UBXN2AP68543 259 aa21.82■■□□□ 1.08
CNOT9-204ENST00000432877 GPAT2Q6NUI2 795 aa21.82■■□□□ 1.08
CNOT9-204ENST00000432877 SCYL3Q8IZE3 742 aa21.82■■□□□ 1.08
CNOT9-204ENST00000432877 SIL1Q9H173 461 aa21.82■■□□□ 1.08
CNOT9-204ENST00000432877 SLC45A1Q9Y2W3 748 aa21.82■■□□□ 1.08
CNOT9-204ENST00000432877 ZHX2Q9Y6X8 837 aa21.82■■□□□ 1.08
CNOT9-204ENST00000432877 BRCA2P51587 3418 aa21.82■■□□□ 1.08
CNOT9-204ENST00000432877 MYPNQ86TC9 1320 aa21.81■■□□□ 1.08
CNOT9-204ENST00000432877 H0YGN5 161 aa21.81■■□□□ 1.08
CNOT9-204ENST00000432877 GJB1P08034 283 aa21.81■■□□□ 1.08
CNOT9-204ENST00000432877 GJA8P48165 433 aa21.81■■□□□ 1.08
CNOT9-204ENST00000432877 MTFR1Q15390 333 aa21.81■■□□□ 1.08
CNOT9-204ENST00000432877 SPTY2D1Q68D10 685 aaPredicted RBP21.81■■□□□ 1.08
CNOT9-204ENST00000432877 COPRSQ9NQ92 184 aa21.81■■□□□ 1.08
CNOT9-204ENST00000432877 PDS5AQ29RF7 1337 aaKnown RBP21.8■■□□□ 1.08
CNOT9-204ENST00000432877 A0A0G2JLL6 359 aaPredicted RBP21.8■■□□□ 1.08
CNOT9-204ENST00000432877 PHKA1P46020 1223 aa21.8■■□□□ 1.08
CNOT9-204ENST00000432877 RGS3P49796 1198 aa21.8■■□□□ 1.08
CNOT9-204ENST00000432877 PRRT2Q7Z6L0 340 aaPredicted RBP21.8■■□□□ 1.08
CNOT9-204ENST00000432877 ZFPM1Q8IX07 1006 aa21.8■■□□□ 1.08
CNOT9-204ENST00000432877 SLAIN1Q8ND83 568 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 137.7 ms