RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 EPN2O95208 641 aa6.07□□□□□ -1.44
PTPN4-203ENST00000430976 CYP1A2P05177 515 aa6.07□□□□□ -1.44
PTPN4-203ENST00000430976 CDC27P30260 824 aa6.07□□□□□ -1.44
PTPN4-203ENST00000430976 RAPGEF1Q13905 1077 aa6.07□□□□□ -1.44
PTPN4-203ENST00000430976 ANKRD1Q15327 319 aa6.07□□□□□ -1.44
PTPN4-203ENST00000430976 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.07□□□□□ -1.44
PTPN4-203ENST00000430976 JPH3Q8WXH2 748 aaPredicted RBP6.07□□□□□ -1.44
PTPN4-203ENST00000430976 UROC1Q96N76 676 aa6.07□□□□□ -1.44
PTPN4-203ENST00000430976 SH3GLB2Q9NR46 395 aa6.07□□□□□ -1.44
PTPN4-203ENST00000430976 GTF3C4Q9UKN8 822 aa6.07□□□□□ -1.44
PTPN4-203ENST00000430976 CARD8Q9Y2G2 431 aa6.07□□□□□ -1.44
PTPN4-203ENST00000430976 SPDYE16A6NNV3 312 aaPredicted RBP6.07□□□□□ -1.44
PTPN4-203ENST00000430976 NDUFAB1O14561 156 aa6.07□□□□□ -1.44
PTPN4-203ENST00000430976 SKAP2O75563 359 aaPredicted RBP6.07□□□□□ -1.44
PTPN4-203ENST00000430976 SERPINC1P01008 464 aa6.07□□□□□ -1.44
PTPN4-203ENST00000430976 SLFN14P0C7P3 912 aa6.07□□□□□ -1.44
PTPN4-203ENST00000430976 ELF1P32519 619 aa6.07□□□□□ -1.44
PTPN4-203ENST00000430976 CETN2P41208 172 aa6.07□□□□□ -1.44
PTPN4-203ENST00000430976 COX10Q12887 443 aa6.07□□□□□ -1.44
PTPN4-203ENST00000430976 PRKG1Q13976 671 aa6.07□□□□□ -1.44
PTPN4-203ENST00000430976 EIF4A2Q14240 407 aaKnown RBP6.07□□□□□ -1.44
PTPN4-203ENST00000430976 MAJINQ3KP22 176 aa6.07□□□□□ -1.44
PTPN4-203ENST00000430976 TNNI3KQ59H18 835 aa6.07□□□□□ -1.44
PTPN4-203ENST00000430976 ANKRD13DQ6ZTN6 518 aa6.07□□□□□ -1.44
PTPN4-203ENST00000430976 CEP57Q86XR8 500 aa6.07□□□□□ -1.44
PTPN4-203ENST00000430976 TCP11Q8WWU5 503 aa6.07□□□□□ -1.44
PTPN4-203ENST00000430976 EIF2B4Q9UI10 523 aaKnown RBP6.07□□□□□ -1.44
PTPN4-203ENST00000430976 GOLGA8JA6NMD2 632 aa6.07□□□□□ -1.44
PTPN4-203ENST00000430976 GOLGA8TH3BQL2 631 aa6.07□□□□□ -1.44
PTPN4-203ENST00000430976 SGTAO43765 313 aa6.07□□□□□ -1.44
PTPN4-203ENST00000430976 KDM1AO60341 852 aa6.07□□□□□ -1.44
PTPN4-203ENST00000430976 PFDN1O60925 122 aa6.07□□□□□ -1.44
PTPN4-203ENST00000430976 GOLGA8HP0CJ92 632 aa6.07□□□□□ -1.44
PTPN4-203ENST00000430976 TNFAIP3P21580 790 aa6.07□□□□□ -1.44
PTPN4-203ENST00000430976 AP2B1P63010 937 aa6.07□□□□□ -1.44
PTPN4-203ENST00000430976 SFSWAPQ12872 951 aaKnown RBP6.07□□□□□ -1.44
PTPN4-203ENST00000430976 HABP4Q5JVS0 413 aaKnown RBP6.07□□□□□ -1.44
PTPN4-203ENST00000430976 GPIHBP1Q8IV16 184 aa6.07□□□□□ -1.44
PTPN4-203ENST00000430976 PIBF1Q8WXW3 757 aa6.07□□□□□ -1.44
PTPN4-203ENST00000430976 OSBPL2Q9H1P3 480 aa6.07□□□□□ -1.44
PTPN4-203ENST00000430976 ADCY5O95622 1261 aa6.06□□□□□ -1.44
PTPN4-203ENST00000430976 MARSP56192 900 aaKnown RBP6.06□□□□□ -1.44
PTPN4-203ENST00000430976 KIF22Q14807 665 aa6.06□□□□□ -1.44
PTPN4-203ENST00000430976 KCNV1Q6PIU1 500 aa6.06□□□□□ -1.44
PTPN4-203ENST00000430976 USP48Q86UV5 1035 aa6.06□□□□□ -1.44
PTPN4-203ENST00000430976 SLC44A2Q8IWA5 706 aaPredicted RBP6.06□□□□□ -1.44
PTPN4-203ENST00000430976 CCDC144CPQ8IYA2 1237 aa6.06□□□□□ -1.44
PTPN4-203ENST00000430976 EZH1Q92800 747 aaPredicted RBP6.06□□□□□ -1.44
PTPN4-203ENST00000430976 RUNDC1Q96C34 613 aa6.06□□□□□ -1.44
PTPN4-203ENST00000430976 MRPS23Q9Y3D9 190 aaKnown RBP6.06□□□□□ -1.44
PTPN4-203ENST00000430976 CCDC159P0C7I6 412 aa6.06□□□□□ -1.44
PTPN4-203ENST00000430976 GYS1P13807 737 aa6.06□□□□□ -1.44
PTPN4-203ENST00000430976 RASA1P20936 1047 aa6.06□□□□□ -1.44
PTPN4-203ENST00000430976 PSMC4P43686 418 aa6.06□□□□□ -1.44
PTPN4-203ENST00000430976 SIM2Q14190 667 aaPredicted RBP6.06□□□□□ -1.44
PTPN4-203ENST00000430976 DIXDC1Q155Q3 683 aa6.06□□□□□ -1.44
PTPN4-203ENST00000430976 PPP1R18Q6NYC8 613 aa6.06□□□□□ -1.44
PTPN4-203ENST00000430976 TEX19Q8NA77 164 aa6.06□□□□□ -1.44
PTPN4-203ENST00000430976 DRAXINQ8NBI3 349 aaPredicted RBP6.06□□□□□ -1.44
PTPN4-203ENST00000430976 BICD2Q8TD16 824 aa6.06□□□□□ -1.44
PTPN4-203ENST00000430976 ASIC4Q96FT7 647 aa6.06□□□□□ -1.44
PTPN4-203ENST00000430976 CDK5RAP3Q96JB5 506 aa6.06□□□□□ -1.44
PTPN4-203ENST00000430976 PCMTD1Q96MG8 357 aaPredicted RBP6.06□□□□□ -1.44
PTPN4-203ENST00000430976 HAUS7Q99871 368 aa6.06□□□□□ -1.44
PTPN4-203ENST00000430976 SYNDIG1Q9H7V2 258 aa6.06□□□□□ -1.44
PTPN4-203ENST00000430976 DDX21Q9NR30 783 aaKnown RBP eCLIP6.06□□□□□ -1.44
PTPN4-203ENST00000430976 VPS45Q9NRW7 570 aa6.06□□□□□ -1.44
PTPN4-203ENST00000430976 LUC7L2Q9Y383 392 aaKnown RBP6.06□□□□□ -1.44
PTPN4-203ENST00000430976 AKNAQ7Z591 1439 aa6.06□□□□□ -1.44
PTPN4-203ENST00000430976 FSD2A1L4K1 749 aa6.06□□□□□ -1.44
PTPN4-203ENST00000430976 VIL1P09327 827 aaKnown RBP6.06□□□□□ -1.44
PTPN4-203ENST00000430976 NUTM1Q86Y26 1132 aa6.06□□□□□ -1.44
PTPN4-203ENST00000430976 UBR7Q8N806 425 aa6.06□□□□□ -1.44
PTPN4-203ENST00000430976 SCG3Q8WXD2 468 aaKnown RBP6.06□□□□□ -1.44
PTPN4-203ENST00000430976 GOLGA1Q92805 767 aa6.06□□□□□ -1.44
PTPN4-203ENST00000430976 TCEANC2Q96MN5 208 aa6.06□□□□□ -1.44
PTPN4-203ENST00000430976 TTC14Q96N46 770 aa6.06□□□□□ -1.44
PTPN4-203ENST00000430976 SPAG5Q96R06 1193 aa6.06□□□□□ -1.44
PTPN4-203ENST00000430976 FNBP1Q96RU3 617 aa6.06□□□□□ -1.44
PTPN4-203ENST00000430976 PFDN2Q9UHV9 154 aa6.06□□□□□ -1.44
PTPN4-203ENST00000430976 ZNF711Q9Y462 761 aa6.06□□□□□ -1.44
PTPN4-203ENST00000430976 GOLGA6L7A0A1B0GV03 622 aa6.05□□□□□ -1.44
PTPN4-203ENST00000430976 NEMFO60524 1076 aa6.05□□□□□ -1.44
PTPN4-203ENST00000430976 MTRF1O75570 445 aaKnown RBP6.05□□□□□ -1.44
PTPN4-203ENST00000430976 ABL1P00519 1130 aa6.05□□□□□ -1.44
PTPN4-203ENST00000430976 NEK2P51955 445 aa6.05□□□□□ -1.44
PTPN4-203ENST00000430976 MAP3K9P80192 1104 aa6.05□□□□□ -1.44
PTPN4-203ENST00000430976 TBC1D25Q3MII6 688 aa6.05□□□□□ -1.44
PTPN4-203ENST00000430976 SH2D4BQ5SQS7 431 aa6.05□□□□□ -1.44
PTPN4-203ENST00000430976 TCERG1LQ5VWI1 586 aa6.05□□□□□ -1.44
PTPN4-203ENST00000430976 RBM12BQ8IXT5 1001 aaKnown RBP6.05□□□□□ -1.44
PTPN4-203ENST00000430976 PLPP6Q8IY26 295 aa6.05□□□□□ -1.44
PTPN4-203ENST00000430976 AFAP1Q8N556 730 aa6.05□□□□□ -1.44
PTPN4-203ENST00000430976 SPDYE1Q8NFV5 336 aaPredicted RBP6.05□□□□□ -1.44
PTPN4-203ENST00000430976 ALG1Q9BT22 464 aa6.05□□□□□ -1.44
PTPN4-203ENST00000430976 CNNM2Q9H8M5 875 aa6.05□□□□□ -1.44
PTPN4-203ENST00000430976 PFDN4Q9NQP4 134 aa6.05□□□□□ -1.44
PTPN4-203ENST00000430976 TRPC6Q9Y210 931 aa6.05□□□□□ -1.44
PTPN4-203ENST00000430976 FOXN3O00409 490 aaPredicted RBP6.05□□□□□ -1.44
PTPN4-203ENST00000430976 DDX5P17844 614 aaKnown RBP6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms