RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 MYH13Q9UKX3 1938 aa12.04□□□□□ -0.48
HDAC6-207ENST00000430858 HSPA8P11142 646 aaKnown RBP12.04□□□□□ -0.48
HDAC6-207ENST00000430858 COL13A1Q5TAT6 717 aaPredicted RBP12.04□□□□□ -0.48
HDAC6-207ENST00000430858 CDC42EP5Q6NZY7 148 aa12.04□□□□□ -0.48
HDAC6-207ENST00000430858 SIRT2Q8IXJ6 389 aa12.04□□□□□ -0.48
HDAC6-207ENST00000430858 RHPN1Q8TCX5 695 aa12.04□□□□□ -0.48
HDAC6-207ENST00000430858 EAF2Q96CJ1 260 aaPredicted RBP12.04□□□□□ -0.48
HDAC6-207ENST00000430858 HOOK2Q96ED9 719 aa12.04□□□□□ -0.48
HDAC6-207ENST00000430858 KIF1BPQ96EK5 621 aa12.04□□□□□ -0.48
HDAC6-207ENST00000430858 DBNLQ9UJU6 430 aaKnown RBP12.04□□□□□ -0.48
HDAC6-207ENST00000430858 FZD1Q9UP38 647 aa12.04□□□□□ -0.48
HDAC6-207ENST00000430858 GAKO14976 1311 aa12.04□□□□□ -0.48
HDAC6-207ENST00000430858 IGSF3O75054 1194 aa12.03□□□□□ -0.48
HDAC6-207ENST00000430858 RAB11FIP3O75154 756 aa12.03□□□□□ -0.48
HDAC6-207ENST00000430858 USP2O75604 605 aaPredicted RBP12.03□□□□□ -0.48
HDAC6-207ENST00000430858 LDHCP07864 332 aa12.03□□□□□ -0.48
HDAC6-207ENST00000430858 LBX1P52954 281 aa12.03□□□□□ -0.48
HDAC6-207ENST00000430858 GSTO1P78417 241 aa12.03□□□□□ -0.48
HDAC6-207ENST00000430858 MECOMQ03112 1051 aa12.03□□□□□ -0.48
HDAC6-207ENST00000430858 PI16Q6UXB8 463 aa12.03□□□□□ -0.48
HDAC6-207ENST00000430858 ANKRD13AQ8IZ07 590 aa12.03□□□□□ -0.48
HDAC6-207ENST00000430858 CLASRPQ8N2M8 674 aaKnown RBP12.03□□□□□ -0.48
HDAC6-207ENST00000430858 FAM151AQ8WW52 585 aa12.03□□□□□ -0.48
HDAC6-207ENST00000430858 SLC10A4Q96EP9 437 aa12.03□□□□□ -0.48
HDAC6-207ENST00000430858 CSRNP1Q96S65 589 aa12.03□□□□□ -0.48
HDAC6-207ENST00000430858 CCDC8Q9H0W5 538 aaPredicted RBP12.03□□□□□ -0.48
HDAC6-207ENST00000430858 USP40Q9NVE5 1235 aa12.03□□□□□ -0.48
HDAC6-207ENST00000430858 RPAP1Q9BWH6 1393 aaPredicted RBP12.03□□□□□ -0.48
HDAC6-207ENST00000430858 SPRYD7Q5W111 196 aa12.02□□□□□ -0.49
HDAC6-207ENST00000430858 TBC1D9Q6ZT07 1266 aa12.02□□□□□ -0.49
HDAC6-207ENST00000430858 AACSQ86V21 672 aa12.02□□□□□ -0.49
HDAC6-207ENST00000430858 CDAN1Q8IWY9 1227 aa12.02□□□□□ -0.49
HDAC6-207ENST00000430858 NSUN4Q96CB9 384 aaKnown RBP12.02□□□□□ -0.49
HDAC6-207ENST00000430858 IDI2Q9BXS1 227 aa12.02□□□□□ -0.49
HDAC6-207ENST00000430858 IL1RAPL2Q9NP60 686 aa12.02□□□□□ -0.49
HDAC6-207ENST00000430858 SAGE1Q9NXZ1 904 aa12.02□□□□□ -0.49
HDAC6-207ENST00000430858 TLR7Q9NYK1 1049 aaKnown RBP12.02□□□□□ -0.49
HDAC6-207ENST00000430858 RAI14Q9P0K7 980 aa12.02□□□□□ -0.49
HDAC6-207ENST00000430858 LRP2BPQ9P2M1 347 aa12.02□□□□□ -0.49
HDAC6-207ENST00000430858 MROH7-TTC4A0A0A0MT08 1334 aa12.02□□□□□ -0.49
HDAC6-207ENST00000430858 GPR75-ASB3A0A0A6YYF3 556 aa12.01□□□□□ -0.49
HDAC6-207ENST00000430858 MAP4K4O95819 1239 aaPredicted RBP12.01□□□□□ -0.49
HDAC6-207ENST00000430858 ZBTB48P10074 688 aaPredicted RBP12.01□□□□□ -0.49
HDAC6-207ENST00000430858 BTDP43251 543 aa12.01□□□□□ -0.49
HDAC6-207ENST00000430858 ZAP70P43403 619 aa12.01□□□□□ -0.49
HDAC6-207ENST00000430858 RRP1P56182 461 aaKnown RBP12.01□□□□□ -0.49
HDAC6-207ENST00000430858 NFIAQ12857 509 aa12.01□□□□□ -0.49
HDAC6-207ENST00000430858 DCAF15Q66K64 600 aa12.01□□□□□ -0.49
HDAC6-207ENST00000430858 SNRKQ9NRH2 765 aa12.01□□□□□ -0.49
HDAC6-207ENST00000430858 APBB1O00213 710 aa12□□□□□ -0.49
HDAC6-207ENST00000430858 ENTPD3O75355 529 aa12□□□□□ -0.49
HDAC6-207ENST00000430858 CYP2E1P05181 493 aaPredicted RBP12□□□□□ -0.49
HDAC6-207ENST00000430858 TM4SF4P48230 202 aa12□□□□□ -0.49
HDAC6-207ENST00000430858 INHBEP58166 350 aa12□□□□□ -0.49
HDAC6-207ENST00000430858 MAP3K9P80192 1104 aa12□□□□□ -0.49
HDAC6-207ENST00000430858 SREBF2Q12772 1141 aa12□□□□□ -0.49
HDAC6-207ENST00000430858 TCP10Q12799 353 aa12□□□□□ -0.49
HDAC6-207ENST00000430858 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12□□□□□ -0.498e-10■■□□□ 12.3
HDAC6-207ENST00000430858 ZNF384Q8TF68 577 aa12□□□□□ -0.49
HDAC6-207ENST00000430858 WNK4Q96J92 1243 aa12□□□□□ -0.49
HDAC6-207ENST00000430858 CLMNQ96JQ2 1002 aa12□□□□□ -0.49
HDAC6-207ENST00000430858 RNF186Q9NXI6 227 aa12□□□□□ -0.49
HDAC6-207ENST00000430858 FAM198AQ9UFP1 575 aa12□□□□□ -0.49
HDAC6-207ENST00000430858 CSADQ9Y600 493 aa12□□□□□ -0.49
HDAC6-207ENST00000430858 MANSC4A6NHS7 340 aaPredicted RBP11.99□□□□□ -0.49
HDAC6-207ENST00000430858 WDHD1O75717 1129 aaPredicted RBP11.99□□□□□ -0.49
HDAC6-207ENST00000430858 TRPA1O75762 1119 aa11.99□□□□□ -0.49
HDAC6-207ENST00000430858 IFIT2P09913 472 aaKnown RBP11.99□□□□□ -0.49
HDAC6-207ENST00000430858 RHBDL3P58872 404 aa11.99□□□□□ -0.49
HDAC6-207ENST00000430858 MKRN3Q13064 507 aaKnown RBP11.99□□□□□ -0.49
HDAC6-207ENST00000430858 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.99□□□□□ -0.49
HDAC6-207ENST00000430858 TNS4Q8IZW8 715 aa11.99□□□□□ -0.49
HDAC6-207ENST00000430858 ZNF341Q9BYN7 854 aa11.99□□□□□ -0.49
HDAC6-207ENST00000430858 TSKSQ9UJT2 592 aa11.99□□□□□ -0.49
HDAC6-207ENST00000430858 RFX7Q2KHR2 1363 aa11.98□□□□□ -0.49
HDAC6-207ENST00000430858 NPM3O75607 178 aaKnown RBP11.98□□□□□ -0.49
HDAC6-207ENST00000430858 BAG3O95817 575 aa11.98□□□□□ -0.49
HDAC6-207ENST00000430858 RGS3P49796 1198 aa11.98□□□□□ -0.49
HDAC6-207ENST00000430858 VGLL4Q14135 290 aa11.98□□□□□ -0.49
HDAC6-207ENST00000430858 NAA16Q6N069 864 aaPredicted RBP11.98□□□□□ -0.49
HDAC6-207ENST00000430858 TMED8Q6PL24 325 aaPredicted RBP11.98□□□□□ -0.49
HDAC6-207ENST00000430858 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.98□□□□□ -0.49
HDAC6-207ENST00000430858 OPTNQ96CV9 577 aa11.98□□□□□ -0.49
HDAC6-207ENST00000430858 WRNIP1Q96S55 665 aa11.98□□□□□ -0.49
HDAC6-207ENST00000430858 NOL10Q9BSC4 688 aaKnown RBP11.98□□□□□ -0.49
HDAC6-207ENST00000430858 LRRCC1Q9C099 1032 aa11.98□□□□□ -0.49
HDAC6-207ENST00000430858 PIH1D3Q9NQM4 214 aaKnown RBP11.98□□□□□ -0.49
HDAC6-207ENST00000430858 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.98□□□□□ -0.49
HDAC6-207ENST00000430858 PLCG2P16885 1265 aa11.97□□□□□ -0.49
HDAC6-207ENST00000430858 TTF1Q15361 905 aaPredicted RBP11.97□□□□□ -0.49
HDAC6-207ENST00000430858 IFFO2Q5TF58 517 aa11.97□□□□□ -0.49
HDAC6-207ENST00000430858 MIGA2Q7L4E1 593 aa11.97□□□□□ -0.49
HDAC6-207ENST00000430858 ZSCAN29Q8IWY8 852 aaPredicted RBP11.97□□□□□ -0.49
HDAC6-207ENST00000430858 ZFPM1Q8IX07 1006 aa11.97□□□□□ -0.49
HDAC6-207ENST00000430858 ELP3Q9H9T3 547 aa11.97□□□□□ -0.49
HDAC6-207ENST00000430858 DDX4Q9NQI0 724 aaKnown RBP11.97□□□□□ -0.49
HDAC6-207ENST00000430858 MYH2Q9UKX2 1941 aa11.96□□□□□ -0.49
HDAC6-207ENST00000430858 IDH1O75874 414 aaKnown RBP11.96□□□□□ -0.49
HDAC6-207ENST00000430858 ALDH1A1P00352 501 aa11.96□□□□□ -0.49
HDAC6-207ENST00000430858 GJA5P36382 358 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms