RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 LDHCP07864 332 aa18.33■□□□□ 0.53
RIF1-204ENST00000430328 P3H4Q92791 437 aa18.33■□□□□ 0.53
RIF1-204ENST00000430328 IWS1Q96ST2 819 aa18.33■□□□□ 0.53
RIF1-204ENST00000430328 KRT23Q9C075 422 aa18.33■□□□□ 0.53
RIF1-204ENST00000430328 EPB41P11171 864 aaKnown RBP18.33■□□□□ 0.53
RIF1-204ENST00000430328 GNAQP50148 359 aa18.33■□□□□ 0.53
RIF1-204ENST00000430328 CCDC138Q96M89 665 aa18.33■□□□□ 0.53
RIF1-204ENST00000430328 PALMDQ9NP74 551 aa18.33■□□□□ 0.53
RIF1-204ENST00000430328 AKNAD1Q5T1N1 836 aa18.33■□□□□ 0.53
RIF1-204ENST00000430328 DHX58Q96C10 678 aa18.33■□□□□ 0.53
RIF1-204ENST00000430328 JADE1Q6IE81 842 aa18.33■□□□□ 0.52
RIF1-204ENST00000430328 FYCO1Q9BQS8 1478 aa18.33■□□□□ 0.52
RIF1-204ENST00000430328 TRIM14Q14142 442 aa18.33■□□□□ 0.52
RIF1-204ENST00000430328 RTN1Q16799 776 aa18.33■□□□□ 0.52
RIF1-204ENST00000430328 DACT1Q9NYF0 836 aa18.33■□□□□ 0.52
RIF1-204ENST00000430328 TSPY3P0CV98 308 aa18.33■□□□□ 0.52
RIF1-204ENST00000430328 TSPY8P0CW00 308 aa18.33■□□□□ 0.52
RIF1-204ENST00000430328 MARCKSP29966 332 aaPredicted RBP18.33■□□□□ 0.52
RIF1-204ENST00000430328 SNCBQ16143 134 aa18.33■□□□□ 0.52
RIF1-204ENST00000430328 MGARPQ8TDB4 240 aa18.33■□□□□ 0.52
RIF1-204ENST00000430328 GNAT3A8MTJ3 354 aa18.32■□□□□ 0.52
RIF1-204ENST00000430328 EEF1DP29692 281 aaKnown RBP18.32■□□□□ 0.52
RIF1-204ENST00000430328 STX2P32856 288 aa18.32■□□□□ 0.52
RIF1-204ENST00000430328 ZSCAN26Q16670 478 aa18.32■□□□□ 0.52
RIF1-204ENST00000430328 ANKRD20A4Q4UJ75 823 aa18.32■□□□□ 0.52
RIF1-204ENST00000430328 ANKRD20A8PQ5CZ79 823 aa18.32■□□□□ 0.52
RIF1-204ENST00000430328 ANKRD20A2Q5SQ80 823 aa18.32■□□□□ 0.52
RIF1-204ENST00000430328 ANKRD20A1Q5TYW2 823 aa18.32■□□□□ 0.52
RIF1-204ENST00000430328 CEP19Q96LK0 163 aa18.32■□□□□ 0.52
RIF1-204ENST00000430328 CCDC8Q9H0W5 538 aaPredicted RBP18.32■□□□□ 0.52
RIF1-204ENST00000430328 SPDYE3A6NKU9 549 aa18.32■□□□□ 0.52
RIF1-204ENST00000430328 PPFIA4O75335 1185 aa18.32■□□□□ 0.52
RIF1-204ENST00000430328 DUSP27Q5VZP5 1158 aa18.32■□□□□ 0.52
RIF1-204ENST00000430328 ARHGEF9O43307 516 aa18.32■□□□□ 0.52
RIF1-204ENST00000430328 MMEL1Q495T6 779 aa18.32■□□□□ 0.52
RIF1-204ENST00000430328 SKOR1P84550 965 aa18.32■□□□□ 0.52
RIF1-204ENST00000430328 DAAM1Q9Y4D1 1078 aa18.32■□□□□ 0.52
RIF1-204ENST00000430328 GOLGA8QA0A0J9YX86 632 aa18.32■□□□□ 0.52
RIF1-204ENST00000430328 GOLGA8OA6NCC3 632 aa18.32■□□□□ 0.52
RIF1-204ENST00000430328 GOLGA8NF8WBI6 632 aa18.32■□□□□ 0.52
RIF1-204ENST00000430328 ARMC9Q7Z3E5 817 aa18.32■□□□□ 0.52
RIF1-204ENST00000430328 NUTM2AQ8IVF1 878 aaPredicted RBP18.32■□□□□ 0.52
RIF1-204ENST00000430328 LMNB2Q03252 620 aa18.31■□□□□ 0.52
RIF1-204ENST00000430328 RSBN1LQ6PCB5 846 aaPredicted RBP18.31■□□□□ 0.52
RIF1-204ENST00000430328 CFAP61Q8NHU2 1237 aa18.31■□□□□ 0.52
RIF1-204ENST00000430328 NOX5Q96PH1 765 aa18.31■□□□□ 0.52
RIF1-204ENST00000430328 CLTAP09496 248 aa18.31■□□□□ 0.52
RIF1-204ENST00000430328 PCYT1AP49585 367 aa18.31■□□□□ 0.52
RIF1-204ENST00000430328 CYP26C1Q6V0L0 522 aa18.31■□□□□ 0.52
RIF1-204ENST00000430328 UBE3BQ7Z3V4 1068 aa18.31■□□□□ 0.52
RIF1-204ENST00000430328 CALML3P27482 149 aa18.31■□□□□ 0.52
RIF1-204ENST00000430328 RNASE9P60153 205 aaKnown RBP18.31■□□□□ 0.52
RIF1-204ENST00000430328 RPGRIP1Q96KN7 1286 aa18.31■□□□□ 0.52
RIF1-204ENST00000430328 CEP104O60308 925 aa18.31■□□□□ 0.52
RIF1-204ENST00000430328 KMT5BQ4FZB7 885 aa18.31■□□□□ 0.52
RIF1-204ENST00000430328 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.31■□□□□ 0.52
RIF1-204ENST00000430328 TNFAIP3P21580 790 aa18.3■□□□□ 0.52
RIF1-204ENST00000430328 KRT79Q5XKE5 535 aa18.3■□□□□ 0.52
RIF1-204ENST00000430328 TTF2Q9UNY4 1162 aaKnown RBP18.3■□□□□ 0.52
RIF1-204ENST00000430328 FNBP1Q96RU3 617 aa18.3■□□□□ 0.52
RIF1-204ENST00000430328 RGS16O15492 202 aaPredicted RBP18.3■□□□□ 0.52
RIF1-204ENST00000430328 GSTA1P08263 222 aa18.3■□□□□ 0.52
RIF1-204ENST00000430328 GSTA2P09210 222 aa18.3■□□□□ 0.52
RIF1-204ENST00000430328 HAND2P61296 217 aa18.3■□□□□ 0.52
RIF1-204ENST00000430328 ZNF692Q9BU19 519 aaPredicted RBP18.3■□□□□ 0.52
RIF1-204ENST00000430328 CRNKL1Q9BZJ0 848 aaKnown RBP18.3■□□□□ 0.52
RIF1-204ENST00000430328 TRIM31Q9BZY9 425 aa18.3■□□□□ 0.52
RIF1-204ENST00000430328 RAB17Q9H0T7 212 aa18.3■□□□□ 0.52
RIF1-204ENST00000430328 VEZTQ9HBM0 779 aa18.3■□□□□ 0.52
RIF1-204ENST00000430328 E9PMD0 336 aa18.3■□□□□ 0.52
RIF1-204ENST00000430328 CNNM2Q9H8M5 875 aa18.3■□□□□ 0.52
RIF1-204ENST00000430328 IL1RL1Q01638 556 aa18.3■□□□□ 0.52
RIF1-204ENST00000430328 GFAPP14136 432 aa18.29■□□□□ 0.52
RIF1-204ENST00000430328 SF3A3Q12874 501 aaKnown RBP eCLIP18.29■□□□□ 0.52
RIF1-204ENST00000430328 KRT71Q3SY84 523 aa18.29■□□□□ 0.52
RIF1-204ENST00000430328 ZBTB41Q5SVQ8 909 aa18.29■□□□□ 0.52
RIF1-204ENST00000430328 FRMD3A2A2Y4 597 aa18.29■□□□□ 0.52
RIF1-204ENST00000430328 PHBP35232 272 aa18.29■□□□□ 0.52
RIF1-204ENST00000430328 TRIM75PA6NK02 468 aa18.29■□□□□ 0.52
RIF1-204ENST00000430328 OAS2P29728 719 aaKnown RBP18.29■□□□□ 0.52
RIF1-204ENST00000430328 PPP1R2P41236 205 aa18.29■□□□□ 0.52
RIF1-204ENST00000430328 NAPAP54920 295 aa18.29■□□□□ 0.52
RIF1-204ENST00000430328 ZFXP17010 805 aaPredicted RBP18.28■□□□□ 0.52
RIF1-204ENST00000430328 DTHD1Q6ZMT9 781 aa18.28■□□□□ 0.52
RIF1-204ENST00000430328 TBC1D9Q6ZT07 1266 aa18.28■□□□□ 0.52
RIF1-204ENST00000430328 TEKT2Q9UIF3 430 aa18.28■□□□□ 0.52
RIF1-204ENST00000430328 CFAP221Q4G0U5 840 aa18.28■□□□□ 0.52
RIF1-204ENST00000430328 KLF18A0A0U1RQI7 1052 aa18.28■□□□□ 0.52
RIF1-204ENST00000430328 ESYT2A0FGR8 921 aa18.28■□□□□ 0.52
RIF1-204ENST00000430328 SPTLC2O15270 562 aa18.28■□□□□ 0.52
RIF1-204ENST00000430328 SYCE1Q8N0S2 351 aa18.28■□□□□ 0.52
RIF1-204ENST00000430328 ATP6V0A1Q93050 837 aa18.28■□□□□ 0.52
RIF1-204ENST00000430328 MYD88Q99836 296 aa18.28■□□□□ 0.52
RIF1-204ENST00000430328 POLR3CQ9BUI4 534 aaPredicted RBP18.28■□□□□ 0.52
RIF1-204ENST00000430328 SUFUQ9UMX1 484 aa18.28■□□□□ 0.52
RIF1-204ENST00000430328 HOMER3Q9NSC5 361 aa18.28■□□□□ 0.52
RIF1-204ENST00000430328 MRFAP1Q9Y605 127 aa18.27■□□□□ 0.52
RIF1-204ENST00000430328 STX17P56962 302 aa18.27■□□□□ 0.52
RIF1-204ENST00000430328 GSTO1P78417 241 aa18.27■□□□□ 0.52
RIF1-204ENST00000430328 KRT12Q99456 494 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms