RNA–Protein interactions for RNA: ENST00000429344.6

CACTIN-203, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-203ENST00000429344 HMGB1P09429 215 aaKnown RBP17.22■□□□□ 0.35
CACTIN-203ENST00000429344 SCARF1Q14162 830 aa17.22■□□□□ 0.35
CACTIN-203ENST00000429344 E4F1Q66K89 784 aaPredicted RBP17.22■□□□□ 0.35
CACTIN-203ENST00000429344 NAA16Q6N069 864 aaPredicted RBP17.22■□□□□ 0.35
CACTIN-203ENST00000429344 TERF2Q15554 542 aa17.21■□□□□ 0.35
CACTIN-203ENST00000429344 CCDC152Q4G0S7 254 aa17.21■□□□□ 0.35
CACTIN-203ENST00000429344 ARMCX5Q6P1M9 558 aa17.21■□□□□ 0.35
CACTIN-203ENST00000429344 MICU3Q86XE3 530 aa17.21■□□□□ 0.35
CACTIN-203ENST00000429344 CARD6Q9BX69 1037 aa17.21■□□□□ 0.35
CACTIN-203ENST00000429344 PHRF1Q9P1Y6 1649 aaKnown RBP17.21■□□□□ 0.35
CACTIN-203ENST00000429344 ZNF213O14771 459 aa17.21■□□□□ 0.35
CACTIN-203ENST00000429344 CIAO1O76071 339 aa17.21■□□□□ 0.35
CACTIN-203ENST00000429344 PRC1O43663 620 aa17.21■□□□□ 0.35
CACTIN-203ENST00000429344 SLFN14P0C7P3 912 aa17.21■□□□□ 0.35
CACTIN-203ENST00000429344 FANCCQ00597 558 aa17.21■□□□□ 0.35
CACTIN-203ENST00000429344 SUSD4Q5VX71 490 aa17.21■□□□□ 0.35
CACTIN-203ENST00000429344 SMARCC1Q92922 1105 aaPredicted RBP17.21■□□□□ 0.35
CACTIN-203ENST00000429344 HELLSQ9NRZ9 838 aa17.21■□□□□ 0.35
CACTIN-203ENST00000429344 TMCO3Q6UWJ1 677 aa17.2■□□□□ 0.34
CACTIN-203ENST00000429344 CDC25BP30305 580 aa17.2■□□□□ 0.34
CACTIN-203ENST00000429344 PHKA1P46020 1223 aa17.2■□□□□ 0.34
CACTIN-203ENST00000429344 RBM6P78332 1123 aaKnown RBP17.2■□□□□ 0.34
CACTIN-203ENST00000429344 GABPB1Q06547 395 aaPredicted RBP17.2■□□□□ 0.34
CACTIN-203ENST00000429344 SARM1Q6SZW1 724 aa17.2■□□□□ 0.34
CACTIN-203ENST00000429344 NYAP1Q6ZVC0 841 aa17.2■□□□□ 0.34
CACTIN-203ENST00000429344 MYL10Q9BUA6 226 aa17.2■□□□□ 0.34
CACTIN-203ENST00000429344 MAST3O60307 1309 aa17.2■□□□□ 0.34
CACTIN-203ENST00000429344 ZPR1O75312 459 aa17.2■□□□□ 0.34
CACTIN-203ENST00000429344 TNNT3P45378 269 aaPredicted RBP17.2■□□□□ 0.34
CACTIN-203ENST00000429344 PNOCQ13519 176 aa17.2■□□□□ 0.34
CACTIN-203ENST00000429344 PHKBQ93100 1093 aa17.2■□□□□ 0.34
CACTIN-203ENST00000429344 CLIC6Q96NY7 704 aa17.2■□□□□ 0.34
CACTIN-203ENST00000429344 GPR108Q9NPR9 543 aa17.2■□□□□ 0.34
CACTIN-203ENST00000429344 CARMIL3Q8ND23 1372 aa17.19■□□□□ 0.34
CACTIN-203ENST00000429344 SPATA31A1Q5TZJ5 1347 aa17.19■□□□□ 0.34
CACTIN-203ENST00000429344 CCDC66A2RUB6 948 aa17.19■□□□□ 0.34
CACTIN-203ENST00000429344 SYKP43405 635 aa17.19■□□□□ 0.34
CACTIN-203ENST00000429344 TRIM28Q13263 835 aaKnown RBP17.19■□□□□ 0.34
CACTIN-203ENST00000429344 CPLX3Q8WVH0 158 aa17.19■□□□□ 0.34
CACTIN-203ENST00000429344 OSBP2Q969R2 916 aa17.19■□□□□ 0.34
CACTIN-203ENST00000429344 RAI14Q9P0K7 980 aa17.19■□□□□ 0.34
CACTIN-203ENST00000429344 TOP1P11387 765 aaKnown RBP17.19■□□□□ 0.34
CACTIN-203ENST00000429344 NBPF11Q86T75 865 aa17.19■□□□□ 0.34
CACTIN-203ENST00000429344 FMR1NBQ8N0W7 255 aaPredicted RBP17.19■□□□□ 0.34
CACTIN-203ENST00000429344 SMARCC2Q8TAQ2 1214 aa17.19■□□□□ 0.34
CACTIN-203ENST00000429344 GPAA1O43292 621 aa17.19■□□□□ 0.34
CACTIN-203ENST00000429344 ZFYP08048 801 aaPredicted RBP17.19■□□□□ 0.34
CACTIN-203ENST00000429344 PFKFB1P16118 471 aa17.19■□□□□ 0.34
CACTIN-203ENST00000429344 CLCN6P51797 869 aa17.19■□□□□ 0.34
CACTIN-203ENST00000429344 GNG11P61952 73 aa17.19■□□□□ 0.34
CACTIN-203ENST00000429344 MORC2Q9Y6X9 1032 aaPredicted RBP17.19■□□□□ 0.34
CACTIN-203ENST00000429344 M0R2C6 588 aa17.18■□□□□ 0.34
CACTIN-203ENST00000429344 BMS1Q14692 1282 aaKnown RBP17.18■□□□□ 0.34
CACTIN-203ENST00000429344 KARSQ15046 597 aaKnown RBP17.18■□□□□ 0.34
CACTIN-203ENST00000429344 ADALQ6DHV7 355 aa17.18■□□□□ 0.34
CACTIN-203ENST00000429344 ILDR1Q86SU0 546 aaPredicted RBP17.18■□□□□ 0.34
CACTIN-203ENST00000429344 DPF2Q92785 391 aa17.18■□□□□ 0.34
CACTIN-203ENST00000429344 LLPHQ9BRT6 129 aaKnown RBP17.18■□□□□ 0.34
CACTIN-203ENST00000429344 ARGLU1Q9NWB6 273 aaPredicted RBP17.18■□□□□ 0.34
CACTIN-203ENST00000429344 PALLDQ8WX93 1383 aa17.18■□□□□ 0.34
CACTIN-203ENST00000429344 PDE8BO95263 885 aa17.18■□□□□ 0.34
CACTIN-203ENST00000429344 ZMYM1Q5SVZ6 1142 aa17.18■□□□□ 0.34
CACTIN-203ENST00000429344 USPL1Q5W0Q7 1092 aa17.18■□□□□ 0.34
CACTIN-203ENST00000429344 OLFM4Q6UX06 510 aa17.18■□□□□ 0.34
CACTIN-203ENST00000429344 LINC00301Q8NCQ3 95 aa17.18■□□□□ 0.34
CACTIN-203ENST00000429344 ENGASEQ8NFI3 743 aa17.18■□□□□ 0.34
CACTIN-203ENST00000429344 GNPATO15228 680 aa17.17■□□□□ 0.34
CACTIN-203ENST00000429344 TDO2P48775 406 aa17.17■□□□□ 0.34
CACTIN-203ENST00000429344 MAP3K12Q12852 859 aa17.17■□□□□ 0.34
CACTIN-203ENST00000429344 CCDC150Q8NCX0 1101 aa17.17■□□□□ 0.34
CACTIN-203ENST00000429344 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.17■□□□□ 0.342e-6■■□□□ 13.1
CACTIN-203ENST00000429344 FDPSP14324 419 aaKnown RBP17.17■□□□□ 0.34
CACTIN-203ENST00000429344 PUM3Q15397 648 aaKnown RBP17.17■□□□□ 0.34
CACTIN-203ENST00000429344 ZNF827Q17R98 1081 aa17.17■□□□□ 0.34
CACTIN-203ENST00000429344 MYSM1Q5VVJ2 828 aa17.17■□□□□ 0.34
CACTIN-203ENST00000429344 CCDC102BQ68D86 513 aa17.17■□□□□ 0.34
CACTIN-203ENST00000429344 ZCCHC17Q9NP64 241 aaKnown RBP17.17■□□□□ 0.34
CACTIN-203ENST00000429344 TMEM232C9JQI7 657 aa17.17■□□□□ 0.34
CACTIN-203ENST00000429344 NEK11Q8NG66 645 aa17.17■□□□□ 0.34
CACTIN-203ENST00000429344 APPBP2Q92624 585 aa17.17■□□□□ 0.34
CACTIN-203ENST00000429344 USP21Q9UK80 565 aa17.17■□□□□ 0.34
CACTIN-203ENST00000429344 ITPK1Q13572 414 aa17.16■□□□□ 0.34
CACTIN-203ENST00000429344 SKIDA1Q1XH10 827 aa17.16■□□□□ 0.34
CACTIN-203ENST00000429344 KLHL10Q6JEL2 608 aa17.16■□□□□ 0.34
CACTIN-203ENST00000429344 NBPF5PQ86XG9 351 aaPredicted RBP17.16■□□□□ 0.34
CACTIN-203ENST00000429344 KCNG4Q8TDN1 519 aa17.16■□□□□ 0.34
CACTIN-203ENST00000429344 NAPBQ9H115 298 aa17.16■□□□□ 0.34
CACTIN-203ENST00000429344 DENND2AQ9ULE3 1009 aa17.16■□□□□ 0.34
CACTIN-203ENST00000429344 KIF28PB7ZC32 967 aa17.16■□□□□ 0.34
CACTIN-203ENST00000429344 TSGA10IPQ3SY00 556 aa17.16■□□□□ 0.34
CACTIN-203ENST00000429344 TRMT44Q8IYL2 757 aaKnown RBP17.16■□□□□ 0.34
CACTIN-203ENST00000429344 MAGEB6Q8N7X4 407 aa17.16■□□□□ 0.34
CACTIN-203ENST00000429344 MIGA1Q8NAN2 632 aa17.16■□□□□ 0.34
CACTIN-203ENST00000429344 CDC5LQ99459 802 aaKnown RBP17.16■□□□□ 0.34
CACTIN-203ENST00000429344 DESI2Q9BSY9 194 aa17.16■□□□□ 0.34
CACTIN-203ENST00000429344 KIF2AO00139 706 aaPredicted RBP17.16■□□□□ 0.34
CACTIN-203ENST00000429344 TTF1Q15361 905 aaPredicted RBP17.16■□□□□ 0.34
CACTIN-203ENST00000429344 ANO1Q5XXA6 986 aa17.16■□□□□ 0.34
CACTIN-203ENST00000429344 ALG1Q9BT22 464 aa17.16■□□□□ 0.34
CACTIN-203ENST00000429344 PUS7LQ9H0K6 701 aaKnown RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 154.5 ms