RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 F13A1P00488 732 aa11.04□□□□□ -0.64
SNX13-203ENST00000428135 CEP135Q66GS9 1140 aa11.04□□□□□ -0.64
SNX13-203ENST00000428135 NSMFQ6X4W1 530 aa11.04□□□□□ -0.64
SNX13-203ENST00000428135 DTHD1Q6ZMT9 781 aa11.04□□□□□ -0.64
SNX13-203ENST00000428135 KIAA0825Q8IV33 1275 aa11.04□□□□□ -0.64
SNX13-203ENST00000428135 KIFC2Q96AC6 838 aa11.04□□□□□ -0.64
SNX13-203ENST00000428135 PAGR1Q9BTK6 254 aa11.04□□□□□ -0.64
SNX13-203ENST00000428135 PHKBQ93100 1093 aa11.04□□□□□ -0.64
SNX13-203ENST00000428135 RMND1Q9NWS8 449 aa11.04□□□□□ -0.64
SNX13-203ENST00000428135 GOLGA6L10A0A0M3HER8 536 aa11.03□□□□□ -0.64
SNX13-203ENST00000428135 GNG11P61952 73 aa11.03□□□□□ -0.64
SNX13-203ENST00000428135 TAF12Q16514 161 aa11.03□□□□□ -0.64
SNX13-203ENST00000428135 TRIM35Q9UPQ4 493 aa11.03□□□□□ -0.64
SNX13-203ENST00000428135 MLH3Q9UHC1 1453 aa11.03□□□□□ -0.64
SNX13-203ENST00000428135 RTL1A6NKG5 1358 aa11.03□□□□□ -0.64
SNX13-203ENST00000428135 CRKLP46109 303 aaKnown RBP11.03□□□□□ -0.64
SNX13-203ENST00000428135 NCBP1Q09161 790 aaKnown RBP11.03□□□□□ -0.64
SNX13-203ENST00000428135 FAM173BQ6P4H8 233 aa11.03□□□□□ -0.64
SNX13-203ENST00000428135 TMCO3Q6UWJ1 677 aa11.03□□□□□ -0.64
SNX13-203ENST00000428135 A0A1B0GVL5 298 aa11.03□□□□□ -0.64
SNX13-203ENST00000428135 PRAMEF22A3QJZ6 481 aa11.03□□□□□ -0.64
SNX13-203ENST00000428135 ZBTB7BO15156 539 aaPredicted RBP11.03□□□□□ -0.64
SNX13-203ENST00000428135 ARL1P40616 181 aaPredicted RBP11.03□□□□□ -0.64
SNX13-203ENST00000428135 LRRC27Q9C0I9 530 aa11.03□□□□□ -0.64
SNX13-203ENST00000428135 MYCP01106 439 aaPredicted RBP11.03□□□□□ -0.64
SNX13-203ENST00000428135 ZSCAN30Q86W11 494 aa11.03□□□□□ -0.64
SNX13-203ENST00000428135 OTUD6BQ8N6M0 293 aa11.03□□□□□ -0.64
SNX13-203ENST00000428135 SRP68Q9UHB9 627 aaKnown RBP11.03□□□□□ -0.64
SNX13-203ENST00000428135 TTF2Q9UNY4 1162 aaKnown RBP11.03□□□□□ -0.64
SNX13-203ENST00000428135 TXKP42681 527 aa11.03□□□□□ -0.64
SNX13-203ENST00000428135 BEGAINQ9BUH8 593 aa11.03□□□□□ -0.64
SNX13-203ENST00000428135 TBC1D7Q9P0N9 293 aa11.03□□□□□ -0.64
SNX13-203ENST00000428135 ZNF532Q9HCE3 1301 aa11.03□□□□□ -0.64
SNX13-203ENST00000428135 EIF2AK4Q9P2K8 1649 aaKnown RBP11.03□□□□□ -0.64
SNX13-203ENST00000428135 SPATA5Q8NB90 893 aa11.02□□□□□ -0.64
SNX13-203ENST00000428135 MAGI2Q86UL8 1455 aa11.02□□□□□ -0.64
SNX13-203ENST00000428135 GCKRQ14397 625 aa11.02□□□□□ -0.64
SNX13-203ENST00000428135 IMPG2Q9BZV3 1241 aa11.02□□□□□ -0.64
SNX13-203ENST00000428135 ARHGEF10LQ9HCE6 1279 aa11.02□□□□□ -0.64
SNX13-203ENST00000428135 SERPINA10Q9UK55 444 aa11.02□□□□□ -0.64
SNX13-203ENST00000428135 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.02□□□□□ -0.65
SNX13-203ENST00000428135 CFBP00751 764 aa11.02□□□□□ -0.65
SNX13-203ENST00000428135 RAPGEF1Q13905 1077 aa11.02□□□□□ -0.65
SNX13-203ENST00000428135 DLGAP5Q15398 846 aa11.02□□□□□ -0.65
SNX13-203ENST00000428135 PRDM10Q9NQV6 1147 aa11.02□□□□□ -0.65
SNX13-203ENST00000428135 IVNS1ABPQ9Y6Y0 642 aa11.02□□□□□ -0.65
SNX13-203ENST00000428135 PSMA7O14818 248 aa11.02□□□□□ -0.65
SNX13-203ENST00000428135 CALML3P27482 149 aa11.02□□□□□ -0.65
SNX13-203ENST00000428135 GNA11P29992 359 aa11.02□□□□□ -0.65
SNX13-203ENST00000428135 MAPK8IP2Q13387 824 aaPredicted RBP11.02□□□□□ -0.65
SNX13-203ENST00000428135 PDCL2Q8N4E4 241 aa11.02□□□□□ -0.65
SNX13-203ENST00000428135 ZFP91Q96JP5 570 aaPredicted RBP11.02□□□□□ -0.65
SNX13-203ENST00000428135 USP40Q9NVE5 1235 aa11.02□□□□□ -0.65
SNX13-203ENST00000428135 ADGRL3Q9HAR2 1447 aa11.02□□□□□ -0.65
SNX13-203ENST00000428135 ZFYVE9O95405 1425 aa11.02□□□□□ -0.65
SNX13-203ENST00000428135 ADGRL2O95490 1459 aa11.02□□□□□ -0.65
SNX13-203ENST00000428135 SNW1Q13573 536 aaKnown RBP11.02□□□□□ -0.65
SNX13-203ENST00000428135 NCAPH2Q6IBW4 605 aa11.02□□□□□ -0.65
SNX13-203ENST00000428135 MAATS1Q7Z4T9 603 aa11.02□□□□□ -0.65
SNX13-203ENST00000428135 CSPG5O95196 566 aa11.01□□□□□ -0.65
SNX13-203ENST00000428135 CBX1P83916 185 aa11.01□□□□□ -0.65
SNX13-203ENST00000428135 PPP4R3BQ5MIZ7 849 aa11.01□□□□□ -0.65
SNX13-203ENST00000428135 NOP56O00567 594 aaKnown RBP11.01□□□□□ -0.65
SNX13-203ENST00000428135 SLC27A2O14975 620 aa11.01□□□□□ -0.65
SNX13-203ENST00000428135 CCT6AP40227 531 aaKnown RBP11.01□□□□□ -0.65
SNX13-203ENST00000428135 BCAMP50895 628 aa11.01□□□□□ -0.65
SNX13-203ENST00000428135 ADCY10Q96PN6 1610 aa11.01□□□□□ -0.65
SNX13-203ENST00000428135 SLC1A4P43007 532 aa11.01□□□□□ -0.65
SNX13-203ENST00000428135 MFSD14BQ5SR56 506 aa11.01□□□□□ -0.65
SNX13-203ENST00000428135 ARHGEF25Q86VW2 580 aa11.01□□□□□ -0.65
SNX13-203ENST00000428135 CCDC50Q8IVM0 306 aa11.01□□□□□ -0.65
SNX13-203ENST00000428135 IL17REQ8NFR9 667 aa11.01□□□□□ -0.65
SNX13-203ENST00000428135 GPHNQ9NQX3 736 aaPredicted RBP11.01□□□□□ -0.65
SNX13-203ENST00000428135 FRMPD2Q68DX3 1309 aaPredicted RBP11.01□□□□□ -0.65
SNX13-203ENST00000428135 EIF4A1P60842 406 aaKnown RBP11.01□□□□□ -0.65
SNX13-203ENST00000428135 SMCR8Q8TEV9 937 aaPredicted RBP11.01□□□□□ -0.65
SNX13-203ENST00000428135 SDR42E1Q8WUS8 393 aa11.01□□□□□ -0.65
SNX13-203ENST00000428135 PYM1Q9BRP8 204 aaKnown RBP11.01□□□□□ -0.65
SNX13-203ENST00000428135 ZBTB1Q9Y2K1 713 aa11.01□□□□□ -0.65
SNX13-203ENST00000428135 UBXN1Q04323 297 aa11.01□□□□□ -0.65
SNX13-203ENST00000428135 FAM107BQ9H098 131 aa11.01□□□□□ -0.65
SNX13-203ENST00000428135 KRT5P13647 590 aa11□□□□□ -0.65
SNX13-203ENST00000428135 CARD10Q9BWT7 1032 aa11□□□□□ -0.65
SNX13-203ENST00000428135 PIK3C2GO75747 1445 aa11□□□□□ -0.65
SNX13-203ENST00000428135 TRAF1Q13077 416 aa11□□□□□ -0.65
SNX13-203ENST00000428135 BIRC3Q13489 604 aa11□□□□□ -0.65
SNX13-203ENST00000428135 SMC1AQ14683 1233 aaKnown RBP11□□□□□ -0.65
SNX13-203ENST00000428135 CCDC91Q7Z6B0 441 aa11□□□□□ -0.65
SNX13-203ENST00000428135 LPIN2Q92539 896 aa11□□□□□ -0.65
SNX13-203ENST00000428135 CAPZA3Q96KX2 299 aa11□□□□□ -0.65
SNX13-203ENST00000428135 B4DLN1 442 aa11□□□□□ -0.65
SNX13-203ENST00000428135 ACTN2P35609 894 aa11□□□□□ -0.65
SNX13-203ENST00000428135 MRPL12P52815 198 aaKnown RBP11□□□□□ -0.65
SNX13-203ENST00000428135 KCNJ14Q9UNX9 436 aa11□□□□□ -0.65
SNX13-203ENST00000428135 PLCB3Q01970 1234 aa11□□□□□ -0.65
SNX13-203ENST00000428135 KARSQ15046 597 aaKnown RBP11□□□□□ -0.65
SNX13-203ENST00000428135 KCNQ2O43526 872 aa11□□□□□ -0.65
SNX13-203ENST00000428135 MRPS9P82933 396 aaKnown RBP11□□□□□ -0.65
SNX13-203ENST00000428135 C8orf34Q49A92 452 aa11□□□□□ -0.65
SNX13-203ENST00000428135 EP400NLQ6ZTU2 488 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 136.3 ms