RNA–Protein interactions for RNA: ENST00000427566.2

CLK3P2-201, Transcript of CDC like kinase 3 pseudogene 2, humanhuman

BASIC

Gene CLK3P2, Length 1,453 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P2-201ENST00000427566 FKBP1BP68106 108 aa19.17■□□□□ 0.66
CLK3P2-201ENST00000427566 HHIPL2Q6UWX4 724 aa19.17■□□□□ 0.66
CLK3P2-201ENST00000427566 ARMC9Q7Z3E5 817 aa19.17■□□□□ 0.66
CLK3P2-201ENST00000427566 ZNF512BQ96KM6 892 aaPredicted RBP19.17■□□□□ 0.66
CLK3P2-201ENST00000427566 ANGEL1Q9UNK9 670 aaKnown RBP19.17■□□□□ 0.66
CLK3P2-201ENST00000427566 PDS5AQ29RF7 1337 aaKnown RBP19.16■□□□□ 0.66
CLK3P2-201ENST00000427566 ZAP70P43403 619 aa19.16■□□□□ 0.66
CLK3P2-201ENST00000427566 NBPF12Q5TAG4 269 aaPredicted RBP19.16■□□□□ 0.66
CLK3P2-201ENST00000427566 ANKRD45Q5TZF3 282 aa19.16■□□□□ 0.66
CLK3P2-201ENST00000427566 SPTY2D1Q68D10 685 aaPredicted RBP19.16■□□□□ 0.66
CLK3P2-201ENST00000427566 ERICH6Q7L0X2 663 aa19.16■□□□□ 0.66
CLK3P2-201ENST00000427566 OTUD7AQ8TE49 926 aaPredicted RBP19.16■□□□□ 0.66
CLK3P2-201ENST00000427566 MRIQ9BWK5 157 aa19.16■□□□□ 0.66
CLK3P2-201ENST00000427566 CYP2E1P05181 493 aaPredicted RBP19.16■□□□□ 0.66
CLK3P2-201ENST00000427566 MAP2K1Q02750 393 aaPredicted RBP19.16■□□□□ 0.66
CLK3P2-201ENST00000427566 SUPT20HL1Q3ZLR7 823 aa19.16■□□□□ 0.66
CLK3P2-201ENST00000427566 APOBEC3HQ6NTF7 200 aaKnown RBP19.16■□□□□ 0.66
CLK3P2-201ENST00000427566 GCC1Q96CN9 775 aa19.16■□□□□ 0.66
CLK3P2-201ENST00000427566 DAGLAQ9Y4D2 1042 aa19.16■□□□□ 0.66
CLK3P2-201ENST00000427566 TSHZ3Q63HK5 1081 aa19.15■□□□□ 0.66
CLK3P2-201ENST00000427566 B4GALNT3Q6L9W6 998 aa19.15■□□□□ 0.66
CLK3P2-201ENST00000427566 SMC5Q8IY18 1101 aa19.15■□□□□ 0.66
CLK3P2-201ENST00000427566 ZNF384Q8TF68 577 aa19.15■□□□□ 0.66
CLK3P2-201ENST00000427566 CCDC102AQ96A19 550 aa19.15■□□□□ 0.66
CLK3P2-201ENST00000427566 BEGAINQ9BUH8 593 aa19.15■□□□□ 0.66
CLK3P2-201ENST00000427566 TMEM39BQ9GZU3 492 aa19.15■□□□□ 0.66
CLK3P2-201ENST00000427566 PPP1R12BO60237 982 aaPredicted RBP19.14■□□□□ 0.65
CLK3P2-201ENST00000427566 MAP2K2P36507 400 aa19.14■□□□□ 0.65
CLK3P2-201ENST00000427566 NOGQ13253 232 aa19.14■□□□□ 0.65
CLK3P2-201ENST00000427566 ANTXR1Q9H6X2 564 aa19.14■□□□□ 0.65
CLK3P2-201ENST00000427566 RAI14Q9P0K7 980 aa19.14■□□□□ 0.65
CLK3P2-201ENST00000427566 SSC5DA1L4H1 1573 aa19.13■□□□□ 0.65
CLK3P2-201ENST00000427566 OTOFQ9HC10 1997 aa19.13■□□□□ 0.65
CLK3P2-201ENST00000427566 FOXN1O15353 648 aa19.13■□□□□ 0.65
CLK3P2-201ENST00000427566 SLF2Q8IX21 1173 aa19.13■□□□□ 0.65
CLK3P2-201ENST00000427566 ZIC5Q96T25 663 aa19.13■□□□□ 0.65
CLK3P2-201ENST00000427566 PIH1D3Q9NQM4 214 aaKnown RBP19.13■□□□□ 0.65
CLK3P2-201ENST00000427566 WBP1LQ9NX94 342 aa19.13■□□□□ 0.65
CLK3P2-201ENST00000427566 LRP2BPQ9P2M1 347 aa19.13■□□□□ 0.65
CLK3P2-201ENST00000427566 MAST2Q6P0Q8 1798 aa19.12■□□□□ 0.65
CLK3P2-201ENST00000427566 FAM155AB1AL88 458 aaPredicted RBP19.12■□□□□ 0.65
CLK3P2-201ENST00000427566 RASAL3Q86YV0 1011 aa19.12■□□□□ 0.65
CLK3P2-201ENST00000427566 EDC3Q96F86 508 aaKnown RBP19.12■□□□□ 0.65
CLK3P2-201ENST00000427566 BOLA2Q9H3K6 86 aa19.12■□□□□ 0.65
CLK3P2-201ENST00000427566 USP40Q9NVE5 1235 aa19.12■□□□□ 0.65
CLK3P2-201ENST00000427566 SLC10A3P09131 477 aa19.11■□□□□ 0.65
CLK3P2-201ENST00000427566 KIF23Q02241 960 aaPredicted RBP19.11■□□□□ 0.65
CLK3P2-201ENST00000427566 MECOMQ03112 1051 aa19.11■□□□□ 0.65
CLK3P2-201ENST00000427566 TCP10Q12799 353 aa19.11■□□□□ 0.65
CLK3P2-201ENST00000427566 MKRN3Q13064 507 aaKnown RBP19.11■□□□□ 0.65
CLK3P2-201ENST00000427566 CDC42EP5Q6NZY7 148 aa19.11■□□□□ 0.65
CLK3P2-201ENST00000427566 CDAN1Q8IWY9 1227 aa19.11■□□□□ 0.65
CLK3P2-201ENST00000427566 ATP5JP18859 108 aa19.1■□□□□ 0.65
CLK3P2-201ENST00000427566 DNAJC2Q99543 621 aaKnown RBP19.1■□□□□ 0.65
CLK3P2-201ENST00000427566 LNPKQ9C0E8 428 aa19.1■□□□□ 0.65
CLK3P2-201ENST00000427566 SALL3Q9BXA9 1300 aa19.1■□□□□ 0.65
CLK3P2-201ENST00000427566 DOCK2Q92608 1830 aa19.1■□□□□ 0.65
CLK3P2-201ENST00000427566 BTDP43251 543 aa19.09■□□□□ 0.65
CLK3P2-201ENST00000427566 IREB2P48200 963 aaKnown RBP19.09■□□□□ 0.65
CLK3P2-201ENST00000427566 NSUN4Q96CB9 384 aaKnown RBP19.09■□□□□ 0.65
CLK3P2-201ENST00000427566 TEPSINQ96N21 525 aa19.09■□□□□ 0.65
CLK3P2-201ENST00000427566 ECHDC1Q9NTX5 307 aa19.09■□□□□ 0.65
CLK3P2-201ENST00000427566 MROH7-TTC4A0A0A0MT08 1334 aa19.09■□□□□ 0.65
CLK3P2-201ENST00000427566 USP2O75604 605 aaPredicted RBP19.09■□□□□ 0.65
CLK3P2-201ENST00000427566 LDHCP07864 332 aa19.09■□□□□ 0.65
CLK3P2-201ENST00000427566 GSTO1P78417 241 aa19.09■□□□□ 0.65
CLK3P2-201ENST00000427566 FAM83AQ86UY5 434 aa19.09■□□□□ 0.65
CLK3P2-201ENST00000427566 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.09■□□□□ 0.65
CLK3P2-201ENST00000427566 TSKSQ9UJT2 592 aa19.09■□□□□ 0.65
CLK3P2-201ENST00000427566 PCNTO95613 3336 aa19.09■□□□□ 0.65
CLK3P2-201ENST00000427566 GAKO14976 1311 aa19.08■□□□□ 0.65
CLK3P2-201ENST00000427566 GOLIM4O00461 696 aa19.08■□□□□ 0.64
CLK3P2-201ENST00000427566 CTCFP49711 727 aaPredicted RBP19.08■□□□□ 0.64
CLK3P2-201ENST00000427566 NUCB1Q02818 461 aa19.08■□□□□ 0.64
CLK3P2-201ENST00000427566 NFIAQ12857 509 aa19.08■□□□□ 0.64
CLK3P2-201ENST00000427566 FKBP1CQ5VVH2 108 aa19.08■□□□□ 0.64
CLK3P2-201ENST00000427566 SLC10A4Q96EP9 437 aa19.08■□□□□ 0.64
CLK3P2-201ENST00000427566 IDH1O75874 414 aaKnown RBP19.07■□□□□ 0.64
CLK3P2-201ENST00000427566 PICALMQ13492 652 aa19.07■□□□□ 0.64
CLK3P2-201ENST00000427566 LDLRAD1Q5T700 205 aa19.07■□□□□ 0.64
CLK3P2-201ENST00000427566 CHD1LQ86WJ1 897 aa19.07■□□□□ 0.64
CLK3P2-201ENST00000427566 CLMNQ96JQ2 1002 aa19.07■□□□□ 0.64
CLK3P2-201ENST00000427566 HAUS7Q99871 368 aa19.07■□□□□ 0.64
CLK3P2-201ENST00000427566 NOL10Q9BSC4 688 aaKnown RBP19.07■□□□□ 0.64
CLK3P2-201ENST00000427566 ZBTB47Q9UFB7 747 aaPredicted RBP19.07■□□□□ 0.64
CLK3P2-201ENST00000427566 CDK5RAP2Q96SN8 1893 aa19.07■□□□□ 0.64
CLK3P2-201ENST00000427566 MX1P20591 662 aa19.06■□□□□ 0.64
CLK3P2-201ENST00000427566 LBX1P52954 281 aa19.06■□□□□ 0.64
CLK3P2-201ENST00000427566 MAP3K11Q16584 847 aa19.06■□□□□ 0.64
CLK3P2-201ENST00000427566 NAA16Q6N069 864 aaPredicted RBP19.06■□□□□ 0.64
CLK3P2-201ENST00000427566 ADGRA1Q86SQ6 560 aa19.06■□□□□ 0.64
CLK3P2-201ENST00000427566 PI4K2BQ8TCG2 481 aa19.06■□□□□ 0.64
CLK3P2-201ENST00000427566 FAM151AQ8WW52 585 aa19.06■□□□□ 0.64
CLK3P2-201ENST00000427566 MAP4K4O95819 1239 aaPredicted RBP19.05■□□□□ 0.64
CLK3P2-201ENST00000427566 RGS3P49796 1198 aa19.05■□□□□ 0.64
CLK3P2-201ENST00000427566 ZSCAN29Q8IWY8 852 aaPredicted RBP19.05■□□□□ 0.64
CLK3P2-201ENST00000427566 ANKRD13AQ8IZ07 590 aa19.05■□□□□ 0.64
CLK3P2-201ENST00000427566 FAM163AQ96GL9 167 aaPredicted RBP19.05■□□□□ 0.64
CLK3P2-201ENST00000427566 PAG1Q9NWQ8 432 aa19.05■□□□□ 0.64
CLK3P2-201ENST00000427566 CHGBP05060 677 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms