RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 RAB17Q9H0T7 212 aa16.13■□□□□ 0.17
PTPN13-203ENST00000427191 SV2BQ7L1I2 683 aa16.13■□□□□ 0.17
PTPN13-203ENST00000427191 NYXQ9GZU5 481 aa16.13■□□□□ 0.17
PTPN13-203ENST00000427191 SPOPO43791 374 aa16.12■□□□□ 0.17
PTPN13-203ENST00000427191 UBE3BQ7Z3V4 1068 aa16.12■□□□□ 0.17
PTPN13-203ENST00000427191 LEO1Q8WVC0 666 aaPredicted RBP16.12■□□□□ 0.17
PTPN13-203ENST00000427191 IFNL2Q8IZJ0 200 aa16.12■□□□□ 0.17
PTPN13-203ENST00000427191 LZTFL1Q9NQ48 299 aa16.12■□□□□ 0.17
PTPN13-203ENST00000427191 LMOD1P29536 600 aaPredicted RBP16.12■□□□□ 0.17
PTPN13-203ENST00000427191 ARHGEF2Q92974 986 aaKnown RBP16.12■□□□□ 0.17
PTPN13-203ENST00000427191 ZKSCAN3Q9BRR0 538 aa16.12■□□□□ 0.17
PTPN13-203ENST00000427191 EVCP57679 992 aa16.12■□□□□ 0.17
PTPN13-203ENST00000427191 ARID5AQ03989 594 aa16.12■□□□□ 0.17
PTPN13-203ENST00000427191 Q6ZUG5 572 aa16.12■□□□□ 0.17
PTPN13-203ENST00000427191 RAPGEF3O95398 923 aa16.12■□□□□ 0.17
PTPN13-203ENST00000427191 RHOXF2BP0C7M4 288 aa16.12■□□□□ 0.17
PTPN13-203ENST00000427191 RHOXF2Q9BQY4 288 aa16.12■□□□□ 0.17
PTPN13-203ENST00000427191 LLPHQ9BRT6 129 aaKnown RBP16.12■□□□□ 0.17
PTPN13-203ENST00000427191 LARSQ9P2J5 1176 aaKnown RBP16.12■□□□□ 0.17
PTPN13-203ENST00000427191 TLDC2A0PJX2 215 aa16.12■□□□□ 0.17
PTPN13-203ENST00000427191 SLC4A4Q9Y6R1 1079 aa16.12■□□□□ 0.17
PTPN13-203ENST00000427191 PRR16Q569H4 304 aa16.11■□□□□ 0.17
PTPN13-203ENST00000427191 RAB3GAP1Q15042 981 aa16.11■□□□□ 0.17
PTPN13-203ENST00000427191 DHX58Q96C10 678 aa16.11■□□□□ 0.17
PTPN13-203ENST00000427191 GJC1P36383 396 aa16.11■□□□□ 0.17
PTPN13-203ENST00000427191 MUM1L1Q5H9M0 696 aa16.11■□□□□ 0.17
PTPN13-203ENST00000427191 FAM160A1Q05DH4 1040 aa16.11■□□□□ 0.17
PTPN13-203ENST00000427191 CCDC170Q8IYT3 715 aa16.11■□□□□ 0.17
PTPN13-203ENST00000427191 RHPN1Q8TCX5 695 aa16.11■□□□□ 0.17
PTPN13-203ENST00000427191 TSPYL2Q9H2G4 693 aaPredicted RBP16.11■□□□□ 0.17
PTPN13-203ENST00000427191 SLC8A1P32418 973 aa16.11■□□□□ 0.17
PTPN13-203ENST00000427191 NAA16Q6N069 864 aaPredicted RBP16.1■□□□□ 0.17
PTPN13-203ENST00000427191 GBP5Q96PP8 586 aa16.1■□□□□ 0.17
PTPN13-203ENST00000427191 RBM8AQ9Y5S9 174 aaKnown RBP16.1■□□□□ 0.17
PTPN13-203ENST00000427191 FLOT1O75955 427 aa16.1■□□□□ 0.17
PTPN13-203ENST00000427191 CFAP221Q4G0U5 840 aa16.1■□□□□ 0.17
PTPN13-203ENST00000427191 DENND2CQ68D51 928 aa16.1■□□□□ 0.17
PTPN13-203ENST00000427191 NSMCE1Q8WV22 266 aa16.1■□□□□ 0.17
PTPN13-203ENST00000427191 PPP4R1Q8TF05 950 aa16.1■□□□□ 0.17
PTPN13-203ENST00000427191 ZC3H6P61129 1189 aaKnown RBP16.1■□□□□ 0.17
PTPN13-203ENST00000427191 HAND2P61296 217 aa16.1■□□□□ 0.17
PTPN13-203ENST00000427191 NOC2LQ9Y3T9 749 aaKnown RBP16.1■□□□□ 0.17
PTPN13-203ENST00000427191 ZNF131P52739 623 aa16.1■□□□□ 0.17
PTPN13-203ENST00000427191 VSIG1Q86XK7 387 aa16.1■□□□□ 0.17
PTPN13-203ENST00000427191 SMC5Q8IY18 1101 aa16.1■□□□□ 0.17
PTPN13-203ENST00000427191 FNBP1Q96RU3 617 aa16.1■□□□□ 0.17
PTPN13-203ENST00000427191 PPP2R5BQ15173 497 aa16.1■□□□□ 0.17
PTPN13-203ENST00000427191 ATP2B3Q16720 1220 aa16.1■□□□□ 0.17
PTPN13-203ENST00000427191 TMTC1Q8IUR5 882 aa16.1■□□□□ 0.17
PTPN13-203ENST00000427191 GSDMBQ8TAX9 411 aa16.1■□□□□ 0.17
PTPN13-203ENST00000427191 IFNKQ9P0W0 207 aa16.1■□□□□ 0.17
PTPN13-203ENST00000427191 SMIM23A6NLE4 172 aa16.1■□□□□ 0.17
PTPN13-203ENST00000427191 HHATQ5VTY9 493 aa16.1■□□□□ 0.17
PTPN13-203ENST00000427191 HSP90AA5PQ58FG0 334 aa16.09■□□□□ 0.17
PTPN13-203ENST00000427191 MYCNP04198 464 aaPredicted RBP16.09■□□□□ 0.17
PTPN13-203ENST00000427191 SLC9C1Q4G0N8 1177 aa16.09■□□□□ 0.17
PTPN13-203ENST00000427191 SDSP20132 328 aa16.09■□□□□ 0.17
PTPN13-203ENST00000427191 PHBP35232 272 aa16.09■□□□□ 0.17
PTPN13-203ENST00000427191 PPP1R12CQ9BZL4 782 aa16.09■□□□□ 0.17
PTPN13-203ENST00000427191 CYP7A1P22680 504 aa16.09■□□□□ 0.17
PTPN13-203ENST00000427191 BCRP11274 1271 aa16.09■□□□□ 0.17
PTPN13-203ENST00000427191 KRT3P12035 628 aa16.09■□□□□ 0.17
PTPN13-203ENST00000427191 PAG1Q9NWQ8 432 aa16.09■□□□□ 0.17
PTPN13-203ENST00000427191 MIS18AQ9NYP9 233 aa16.09■□□□□ 0.17
PTPN13-203ENST00000427191 MAGEB6P1A0A0J9YX57 407 aa16.09■□□□□ 0.17
PTPN13-203ENST00000427191 HPDP32754 393 aaPredicted RBP16.09■□□□□ 0.17
PTPN13-203ENST00000427191 EXOC5O00471 708 aa16.08■□□□□ 0.17
PTPN13-203ENST00000427191 RNF40O75150 1001 aa16.08■□□□□ 0.17
PTPN13-203ENST00000427191 YWHAEP62258 255 aaKnown RBP16.08■□□□□ 0.17
PTPN13-203ENST00000427191 ANKRD20A3Q5VUR7 823 aa16.08■□□□□ 0.17
PTPN13-203ENST00000427191 CCDC84Q86UT8 332 aaPredicted RBP16.08■□□□□ 0.17
PTPN13-203ENST00000427191 MPRIPQ6WCQ1 1025 aa16.08■□□□□ 0.16
PTPN13-203ENST00000427191 SYT10Q6XYQ8 523 aa16.08■□□□□ 0.16
PTPN13-203ENST00000427191 C16orf71Q8IYS4 520 aaPredicted RBP16.08■□□□□ 0.16
PTPN13-203ENST00000427191 NOC4LQ9BVI4 516 aaKnown RBP16.08■□□□□ 0.16
PTPN13-203ENST00000427191 MCM7P33993 719 aa16.08■□□□□ 0.16
PTPN13-203ENST00000427191 PDE1AP54750 535 aa16.08■□□□□ 0.16
PTPN13-203ENST00000427191 PCF11O94913 1555 aaKnown RBP16.08■□□□□ 0.16
PTPN13-203ENST00000427191 TROVE2P10155 538 aaKnown RBP eCLIP16.08■□□□□ 0.16
PTPN13-203ENST00000427191 XRCC6P12956 609 aaKnown RBP eCLIP16.08■□□□□ 0.16
PTPN13-203ENST00000427191 CABS1Q96KC9 395 aa16.08■□□□□ 0.16
PTPN13-203ENST00000427191 DNMBPQ6XZF7 1577 aa16.08■□□□□ 0.16
PTPN13-203ENST00000427191 EVI5O60447 810 aa16.08■□□□□ 0.16
PTPN13-203ENST00000427191 GNA14O95837 355 aa16.08■□□□□ 0.16
PTPN13-203ENST00000427191 MARCKSP29966 332 aaPredicted RBP16.08■□□□□ 0.16
PTPN13-203ENST00000427191 DNM1Q05193 864 aaKnown RBP16.08■□□□□ 0.16
PTPN13-203ENST00000427191 UAP1Q16222 522 aaPredicted RBP16.08■□□□□ 0.16
PTPN13-203ENST00000427191 ANKRD13DQ6ZTN6 518 aa16.08■□□□□ 0.16
PTPN13-203ENST00000427191 MIER3Q7Z3K6 550 aa16.08■□□□□ 0.16
PTPN13-203ENST00000427191 NBPF5PQ86XG9 351 aaPredicted RBP16.08■□□□□ 0.16
PTPN13-203ENST00000427191 SYNRGQ9UMZ2 1314 aa16.08■□□□□ 0.16
PTPN13-203ENST00000427191 ASIC2Q16515 512 aa16.07■□□□□ 0.16
PTPN13-203ENST00000427191 SYNJ1O43426 1573 aa16.07■□□□□ 0.16
PTPN13-203ENST00000427191 CA8P35219 290 aa16.07■□□□□ 0.16
PTPN13-203ENST00000427191 DHX32Q7L7V1 743 aaKnown RBP16.07■□□□□ 0.16
PTPN13-203ENST00000427191 SECISBP2LQ93073 1101 aaKnown RBP16.07■□□□□ 0.16
PTPN13-203ENST00000427191 DDX27Q96GQ7 796 aaKnown RBP16.07■□□□□ 0.16
PTPN13-203ENST00000427191 TNFAIP3P21580 790 aa16.07■□□□□ 0.16
PTPN13-203ENST00000427191 IGSF22Q8N9C0 903 aa16.07■□□□□ 0.16
PTPN13-203ENST00000427191 EIF2AQ9BY44 585 aaKnown RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms