RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 EYSQ5T1H1 3165 aa15.85■□□□□ 0.13
SGCE-203ENST00000425444 ECM29Q5VYK3 1845 aa15.84■□□□□ 0.13
SGCE-203ENST00000425444 PRUNE2Q8WUY3 3088 aa15.84■□□□□ 0.13
SGCE-203ENST00000425444 OTOFQ9HC10 1997 aa15.84■□□□□ 0.13
SGCE-203ENST00000425444 SPDYE2BA6NHP3 402 aa15.84■□□□□ 0.13
SGCE-203ENST00000425444 FARP2O94887 1054 aaPredicted RBP15.84■□□□□ 0.13
SGCE-203ENST00000425444 SPDYE6P0CI01 402 aa15.84■□□□□ 0.13
SGCE-203ENST00000425444 HIBADHP31937 336 aaKnown RBP15.84■□□□□ 0.13
SGCE-203ENST00000425444 ATF7IPQ6VMQ6 1270 aa15.84■□□□□ 0.13
SGCE-203ENST00000425444 RAET1EQ8TD07 263 aa15.84■□□□□ 0.13
SGCE-203ENST00000425444 PRMT6Q96LA8 375 aaPredicted RBP15.84■□□□□ 0.13
SGCE-203ENST00000425444 RNF208Q9H0X6 261 aa15.84■□□□□ 0.13
SGCE-203ENST00000425444 BIN2Q9UBW5 565 aaPredicted RBP15.84■□□□□ 0.13
SGCE-203ENST00000425444 STXBP5LQ9Y2K9 1186 aa15.84■□□□□ 0.13
SGCE-203ENST00000425444 EYA2O00167 538 aa15.83■□□□□ 0.12
SGCE-203ENST00000425444 FRAT2O75474 233 aaPredicted RBP15.83■□□□□ 0.12
SGCE-203ENST00000425444 PDE8BO95263 885 aa15.83■□□□□ 0.12
SGCE-203ENST00000425444 GNAI3P08754 354 aa15.83■□□□□ 0.12
SGCE-203ENST00000425444 TRIM27P14373 513 aa15.83■□□□□ 0.12
SGCE-203ENST00000425444 GRK4P32298 578 aa15.83■□□□□ 0.12
SGCE-203ENST00000425444 RBM5P52756 815 aaKnown RBP eCLIP15.83■□□□□ 0.12
SGCE-203ENST00000425444 PUM3Q15397 648 aaKnown RBP15.83■□□□□ 0.12
SGCE-203ENST00000425444 CAVIN4Q5BKX8 364 aa15.83■□□□□ 0.12
SGCE-203ENST00000425444 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.83■□□□□ 0.12
SGCE-203ENST00000425444 Q7L0L9 218 aa15.83■□□□□ 0.12
SGCE-203ENST00000425444 CERS5Q8N5B7 392 aa15.83■□□□□ 0.12
SGCE-203ENST00000425444 CLUAP1Q96AJ1 413 aa15.83■□□□□ 0.12
SGCE-203ENST00000425444 SIL1Q9H173 461 aa15.83■□□□□ 0.12
SGCE-203ENST00000425444 SRRDQ9UH36 339 aa15.83■□□□□ 0.12
SGCE-203ENST00000425444 AOX1Q06278 1338 aa15.83■□□□□ 0.12
SGCE-203ENST00000425444 IFIT1P09914 478 aaKnown RBP15.82■□□□□ 0.12
SGCE-203ENST00000425444 RFX5P48382 616 aaPredicted RBP15.82■□□□□ 0.12
SGCE-203ENST00000425444 VGLL4Q14135 290 aa15.82■□□□□ 0.12
SGCE-203ENST00000425444 ZKSCAN2Q63HK3 967 aa15.82■□□□□ 0.12
SGCE-203ENST00000425444 GPR153Q6NV75 609 aa15.82■□□□□ 0.12
SGCE-203ENST00000425444 VGLL2Q8N8G2 317 aa15.82■□□□□ 0.12
SGCE-203ENST00000425444 FAM84BQ96KN1 310 aaPredicted RBP15.82■□□□□ 0.12
SGCE-203ENST00000425444 CSADQ9Y600 493 aa15.82■□□□□ 0.12
SGCE-203ENST00000425444 HOXD10P28358 340 aa15.81■□□□□ 0.12
SGCE-203ENST00000425444 PSMC4P43686 418 aa15.81■□□□□ 0.12
SGCE-203ENST00000425444 FKBP1AP62942 108 aaKnown RBP15.81■□□□□ 0.12
SGCE-203ENST00000425444 MAP3K9P80192 1104 aa15.81■□□□□ 0.12
SGCE-203ENST00000425444 MFSD14BQ5SR56 506 aa15.81■□□□□ 0.12
SGCE-203ENST00000425444 TDRD7Q8NHU6 1098 aaKnown RBP15.81■□□□□ 0.12
SGCE-203ENST00000425444 TRIM47Q96LD4 638 aa15.81■□□□□ 0.12
SGCE-203ENST00000425444 IQSEC3Q9UPP2 1182 aaPredicted RBP15.81■□□□□ 0.12
SGCE-203ENST00000425444 TNNQ9UQP3 1299 aa15.81■□□□□ 0.12
SGCE-203ENST00000425444 FAM205AQ6ZU69 1335 aa15.8■□□□□ 0.12
SGCE-203ENST00000425444 BTBD19C9JJ37 291 aa15.8■□□□□ 0.12
SGCE-203ENST00000425444 FMNL1O95466 1100 aaPredicted RBP15.8■□□□□ 0.12
SGCE-203ENST00000425444 CETPP11597 493 aa15.8■□□□□ 0.12
SGCE-203ENST00000425444 SLC5A1P13866 664 aa15.8■□□□□ 0.12
SGCE-203ENST00000425444 UBXN2AP68543 259 aa15.8■□□□□ 0.12
SGCE-203ENST00000425444 CHAF1AQ13111 956 aaPredicted RBP15.8■□□□□ 0.12
SGCE-203ENST00000425444 TNFAIP1Q13829 316 aa15.8■□□□□ 0.12
SGCE-203ENST00000425444 FTSJ3Q8IY81 847 aaKnown RBP15.8■□□□□ 0.12
SGCE-203ENST00000425444 U2AF1L4Q8WU68 220 aaKnown RBP15.8■□□□□ 0.12
SGCE-203ENST00000425444 CIAO1O76071 339 aa15.79■□□□□ 0.12
SGCE-203ENST00000425444 OSBPP22059 807 aa15.79■□□□□ 0.12
SGCE-203ENST00000425444 CTGFP29279 349 aa15.79■□□□□ 0.12
SGCE-203ENST00000425444 LPIN2Q92539 896 aa15.79■□□□□ 0.12
SGCE-203ENST00000425444 ZCCHC17Q9NP64 241 aaKnown RBP15.79■□□□□ 0.12
SGCE-203ENST00000425444 FBXO3Q9UK99 471 aa15.79■□□□□ 0.12
SGCE-203ENST00000425444 MYPNQ86TC9 1320 aa15.78■□□□□ 0.12
SGCE-203ENST00000425444 SRGAP3O43295 1099 aa15.78■□□□□ 0.12
SGCE-203ENST00000425444 FGFR2P21802 821 aa15.78■□□□□ 0.12
SGCE-203ENST00000425444 IL15P40933 162 aaPredicted RBP15.78■□□□□ 0.12
SGCE-203ENST00000425444 BCAMP50895 628 aa15.78■□□□□ 0.12
SGCE-203ENST00000425444 C17orf99Q6UX52 265 aa15.78■□□□□ 0.12
SGCE-203ENST00000425444 ATG9AQ7Z3C6 839 aa15.78■□□□□ 0.12
SGCE-203ENST00000425444 FBXO33Q7Z6M2 555 aa15.78■□□□□ 0.12
SGCE-203ENST00000425444 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.78■□□□□ 0.12
SGCE-203ENST00000425444 CDAN1Q8IWY9 1227 aa15.78■□□□□ 0.12
SGCE-203ENST00000425444 TMEM57Q8N5G2 664 aa15.78■□□□□ 0.12
SGCE-203ENST00000425444 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.78■□□□□ 0.12
SGCE-203ENST00000425444 MTMR10Q9NXD2 777 aa15.78■□□□□ 0.12
SGCE-203ENST00000425444 CEP126Q9P2H0 1117 aa15.78■□□□□ 0.12
SGCE-203ENST00000425444 CPA4Q9UI42 421 aa15.78■□□□□ 0.12
SGCE-203ENST00000425444 TTF2Q9UNY4 1162 aaKnown RBP15.78■□□□□ 0.12
SGCE-203ENST00000425444 PA2G4Q9UQ80 394 aaKnown RBP15.78■□□□□ 0.12
SGCE-203ENST00000425444 ARAP2Q8WZ64 1704 aa15.77■□□□□ 0.12
SGCE-203ENST00000425444 SGPL1O95470 568 aa15.77■□□□□ 0.12
SGCE-203ENST00000425444 GNAI2P04899 355 aa15.77■□□□□ 0.12
SGCE-203ENST00000425444 SNAPC2Q13487 334 aa15.77■□□□□ 0.12
SGCE-203ENST00000425444 ATP2B3Q16720 1220 aa15.77■□□□□ 0.12
SGCE-203ENST00000425444 TBC1D22AQ8WUA7 517 aa15.77■□□□□ 0.12
SGCE-203ENST00000425444 UNC93B1Q9H1C4 597 aa15.77■□□□□ 0.12
SGCE-203ENST00000425444 ZNF70Q9UC06 446 aaPredicted RBP15.77■□□□□ 0.12
SGCE-203ENST00000425444 MUC3AQ02505 3323 aa15.76■□□□□ 0.11
SGCE-203ENST00000425444 SPDYE5A6NIY4 337 aa15.76■□□□□ 0.11
SGCE-203ENST00000425444 TFRCP02786 760 aaKnown RBP15.76■□□□□ 0.11
SGCE-203ENST00000425444 TEPSINQ96N21 525 aa15.76■□□□□ 0.11
SGCE-203ENST00000425444 TMEM39BQ9GZU3 492 aa15.76■□□□□ 0.11
SGCE-203ENST00000425444 COPRSQ9NQ92 184 aa15.76■□□□□ 0.11
SGCE-203ENST00000425444 TCP10L2B9ZVM9 353 aa15.75■□□□□ 0.11
SGCE-203ENST00000425444 IRF6O14896 467 aa15.75■□□□□ 0.11
SGCE-203ENST00000425444 BMP8BP34820 402 aa15.75■□□□□ 0.11
SGCE-203ENST00000425444 SPDYE2Q495Y8 402 aa15.75■□□□□ 0.11
SGCE-203ENST00000425444 ERO1BQ86YB8 467 aa15.75■□□□□ 0.11
SGCE-203ENST00000425444 ITPRIPQ8IWB1 547 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms