RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 NOGQ13253 232 aa13.41□□□□□ -0.26
USP49-204ENST00000423567 DIXDC1Q155Q3 683 aa13.41□□□□□ -0.26
USP49-204ENST00000423567 APOBEC3HQ6NTF7 200 aaKnown RBP13.41□□□□□ -0.26
USP49-204ENST00000423567 AACSQ86V21 672 aa13.41□□□□□ -0.26
USP49-204ENST00000423567 KIF1BPQ96EK5 621 aa13.41□□□□□ -0.26
USP49-204ENST00000423567 CCDC8Q9H0W5 538 aaPredicted RBP13.41□□□□□ -0.26
USP49-204ENST00000423567 HMG20BQ9P0W2 317 aa13.41□□□□□ -0.26
USP49-204ENST00000423567 AOX1Q06278 1338 aa13.4□□□□□ -0.26
USP49-204ENST00000423567 APBB1O00213 710 aa13.4□□□□□ -0.26
USP49-204ENST00000423567 GSTO1P78417 241 aa13.4□□□□□ -0.26
USP49-204ENST00000423567 PRKG1Q13976 671 aa13.4□□□□□ -0.26
USP49-204ENST00000423567 CLASRPQ8N2M8 674 aaKnown RBP13.4□□□□□ -0.26
USP49-204ENST00000423567 PLCD3Q8N3E9 789 aa13.4□□□□□ -0.26
USP49-204ENST00000423567 RHPN1Q8TCX5 695 aa13.4□□□□□ -0.26
USP49-204ENST00000423567 EAF2Q96CJ1 260 aaPredicted RBP13.4□□□□□ -0.26
USP49-204ENST00000423567 RAI14Q9P0K7 980 aa13.4□□□□□ -0.26
USP49-204ENST00000423567 DAGLAQ9Y4D2 1042 aa13.4□□□□□ -0.26
USP49-204ENST00000423567 POLR2AP24928 1970 aaKnown RBP13.4□□□□□ -0.27
USP49-204ENST00000423567 UBE2Q2LH0YL09 131 aa13.39□□□□□ -0.27
USP49-204ENST00000423567 AOC2O75106 756 aa13.39□□□□□ -0.27
USP49-204ENST00000423567 LDHCP07864 332 aa13.39□□□□□ -0.27
USP49-204ENST00000423567 MCAMP43121 646 aa13.39□□□□□ -0.27
USP49-204ENST00000423567 IREB2P48200 963 aaKnown RBP13.39□□□□□ -0.27
USP49-204ENST00000423567 FKBP1CQ5VVH2 108 aa13.39□□□□□ -0.27
USP49-204ENST00000423567 PI16Q6UXB8 463 aa13.39□□□□□ -0.27
USP49-204ENST00000423567 SIRT2Q8IXJ6 389 aa13.39□□□□□ -0.27
USP49-204ENST00000423567 ZNF579Q8NAF0 562 aaKnown RBP13.39□□□□□ -0.27
USP49-204ENST00000423567 HOOK2Q96ED9 719 aa13.39□□□□□ -0.27
USP49-204ENST00000423567 ZNF512BQ96KM6 892 aaPredicted RBP13.39□□□□□ -0.27
USP49-204ENST00000423567 IL1RAPL2Q9NP60 686 aa13.39□□□□□ -0.27
USP49-204ENST00000423567 LRP2BPQ9P2M1 347 aa13.39□□□□□ -0.27
USP49-204ENST00000423567 DBNLQ9UJU6 430 aaKnown RBP13.39□□□□□ -0.27
USP49-204ENST00000423567 ANGEL1Q9UNK9 670 aaKnown RBP13.39□□□□□ -0.27
USP49-204ENST00000423567 PAPPA2Q9BXP8 1791 aa13.39□□□□□ -0.27
USP49-204ENST00000423567 IFIT2P09913 472 aaKnown RBP13.38□□□□□ -0.27
USP49-204ENST00000423567 CACNB3P54284 484 aa13.38□□□□□ -0.27
USP49-204ENST00000423567 NBPF12Q5TAG4 269 aaPredicted RBP13.38□□□□□ -0.27
USP49-204ENST00000423567 MOB2Q70IA6 237 aa13.38□□□□□ -0.27
USP49-204ENST00000423567 FAM83AQ86UY5 434 aa13.38□□□□□ -0.27
USP49-204ENST00000423567 BCL11AQ9H165 835 aa13.38□□□□□ -0.27
USP49-204ENST00000423567 SNRKQ9NRH2 765 aa13.38□□□□□ -0.27
USP49-204ENST00000423567 USP40Q9NVE5 1235 aa13.38□□□□□ -0.27
USP49-204ENST00000423567 WBP1LQ9NX94 342 aa13.38□□□□□ -0.27
USP49-204ENST00000423567 TLR7Q9NYK1 1049 aaKnown RBP13.38□□□□□ -0.27
USP49-204ENST00000423567 MYH13Q9UKX3 1938 aa13.38□□□□□ -0.27
USP49-204ENST00000423567 SLC10A3P09131 477 aa13.37□□□□□ -0.27
USP49-204ENST00000423567 MECOMQ03112 1051 aa13.37□□□□□ -0.27
USP49-204ENST00000423567 CDC42EP5Q6NZY7 148 aa13.37□□□□□ -0.27
USP49-204ENST00000423567 TBC1D9Q6ZT07 1266 aa13.37□□□□□ -0.27
USP49-204ENST00000423567 NOL10Q9BSC4 688 aaKnown RBP13.37□□□□□ -0.27
USP49-204ENST00000423567 TMEM39BQ9GZU3 492 aa13.37□□□□□ -0.27
USP49-204ENST00000423567 MROH7-TTC4A0A0A0MT08 1334 aa13.37□□□□□ -0.27
USP49-204ENST00000423567 GAKO14976 1311 aa13.37□□□□□ -0.27
USP49-204ENST00000423567 UNCXA6NJT0 531 aa13.36□□□□□ -0.27
USP49-204ENST00000423567 FAM155AB1AL88 458 aaPredicted RBP13.36□□□□□ -0.27
USP49-204ENST00000423567 IGSF3O75054 1194 aa13.36□□□□□ -0.27
USP49-204ENST00000423567 BTDP43251 543 aa13.36□□□□□ -0.27
USP49-204ENST00000423567 CTCFP49711 727 aaPredicted RBP13.36□□□□□ -0.27
USP49-204ENST00000423567 MAP3K11Q16584 847 aa13.36□□□□□ -0.27
USP49-204ENST00000423567 RASAL3Q86YV0 1011 aa13.36□□□□□ -0.27
USP49-204ENST00000423567 FAM163AQ96GL9 167 aaPredicted RBP13.36□□□□□ -0.27
USP49-204ENST00000423567 LRRCC1Q9C099 1032 aa13.36□□□□□ -0.27
USP49-204ENST00000423567 ECM29Q5VYK3 1845 aa13.36□□□□□ -0.27
USP49-204ENST00000423567 CA12O43570 354 aa13.35□□□□□ -0.27
USP49-204ENST00000423567 ZAP70P43403 619 aa13.35□□□□□ -0.27
USP49-204ENST00000423567 KIF23Q02241 960 aaPredicted RBP13.35□□□□□ -0.27
USP49-204ENST00000423567 LDLRAD1Q5T700 205 aa13.35□□□□□ -0.27
USP49-204ENST00000423567 DCAF15Q66K64 600 aa13.35□□□□□ -0.27
USP49-204ENST00000423567 NAA16Q6N069 864 aaPredicted RBP13.35□□□□□ -0.27
USP49-204ENST00000423567 NSUN4Q96CB9 384 aaKnown RBP13.35□□□□□ -0.27
USP49-204ENST00000423567 SLC10A4Q96EP9 437 aa13.35□□□□□ -0.27
USP49-204ENST00000423567 TEPSINQ96N21 525 aa13.35□□□□□ -0.27
USP49-204ENST00000423567 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.35□□□□□ -0.27
USP49-204ENST00000423567 RPAP1Q9BWH6 1393 aaPredicted RBP13.34□□□□□ -0.27
USP49-204ENST00000423567 GPR75-ASB3A0A0A6YYF3 556 aa13.34□□□□□ -0.27
USP49-204ENST00000423567 FOXN1O15353 648 aa13.34□□□□□ -0.27
USP49-204ENST00000423567 USP2O75604 605 aaPredicted RBP13.34□□□□□ -0.27
USP49-204ENST00000423567 BAG3O95817 575 aa13.34□□□□□ -0.27
USP49-204ENST00000423567 MAP4K4O95819 1239 aaPredicted RBP13.34□□□□□ -0.27
USP49-204ENST00000423567 CYP2E1P05181 493 aaPredicted RBP13.34□□□□□ -0.27
USP49-204ENST00000423567 CLCN6P51797 869 aa13.34□□□□□ -0.27
USP49-204ENST00000423567 TCP10Q12799 353 aa13.34□□□□□ -0.27
USP49-204ENST00000423567 ANKRD13AQ8IZ07 590 aa13.34□□□□□ -0.27
USP49-204ENST00000423567 FAM151AQ8WW52 585 aa13.34□□□□□ -0.27
USP49-204ENST00000423567 CRBNQ96SW2 442 aa13.34□□□□□ -0.27
USP49-204ENST00000423567 FZD1Q9UP38 647 aa13.34□□□□□ -0.27
USP49-204ENST00000423567 SSC5DA1L4H1 1573 aa13.33□□□□□ -0.28
USP49-204ENST00000423567 THSD7BQ9C0I4 1608 aa13.33□□□□□ -0.28
USP49-204ENST00000423567 ENTPD3O75355 529 aa13.33□□□□□ -0.28
USP49-204ENST00000423567 IDH1O75874 414 aaKnown RBP13.33□□□□□ -0.28
USP49-204ENST00000423567 PLCG2P16885 1265 aa13.33□□□□□ -0.28
USP49-204ENST00000423567 NFIAQ12857 509 aa13.33□□□□□ -0.28
USP49-204ENST00000423567 TTF1Q15361 905 aaPredicted RBP13.33□□□□□ -0.28
USP49-204ENST00000423567 ZIC5Q96T25 663 aa13.33□□□□□ -0.28
USP49-204ENST00000423567 IDI2Q9BXS1 227 aa13.33□□□□□ -0.28
USP49-204ENST00000423567 DCTPP1Q9H773 170 aa13.33□□□□□ -0.28
USP49-204ENST00000423567 CSADQ9Y600 493 aa13.33□□□□□ -0.28
USP49-204ENST00000423567 RGS3P49796 1198 aa13.32□□□□□ -0.28
USP49-204ENST00000423567 MAP3K9P80192 1104 aa13.32□□□□□ -0.28
USP49-204ENST00000423567 SREBF2Q12772 1141 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms