RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 GPR25O00155 361 aa18.78■□□□□ 0.6
USB1-202ENST00000423271 NFIAQ12857 509 aa18.78■□□□□ 0.6
USB1-202ENST00000423271 MVPQ14764 893 aaKnown RBP18.78■□□□□ 0.6
USB1-202ENST00000423271 CTU1Q7Z7A3 348 aaKnown RBP18.78■□□□□ 0.6
USB1-202ENST00000423271 ITPRIPQ8IWB1 547 aa18.78■□□□□ 0.6
USB1-202ENST00000423271 NEUROD6Q96NK8 337 aa18.78■□□□□ 0.6
USB1-202ENST00000423271 PDS5AQ29RF7 1337 aaKnown RBP18.77■□□□□ 0.6
USB1-202ENST00000423271 MAP3K9P80192 1104 aa18.77■□□□□ 0.6
USB1-202ENST00000423271 G3BP1Q13283 466 aaKnown RBP eCLIP18.77■□□□□ 0.6
USB1-202ENST00000423271 POLA2Q14181 598 aa18.77■□□□□ 0.6
USB1-202ENST00000423271 CFHR5Q9BXR6 569 aa18.77■□□□□ 0.6
USB1-202ENST00000423271 INHBEP58166 350 aa18.76■□□□□ 0.59
USB1-202ENST00000423271 TCP10Q12799 353 aa18.76■□□□□ 0.59
USB1-202ENST00000423271 PI16Q6UXB8 463 aa18.76■□□□□ 0.59
USB1-202ENST00000423271 ABCF2Q9UG63 623 aa18.76■□□□□ 0.59
USB1-202ENST00000423271 GAKO14976 1311 aa18.75■□□□□ 0.59
USB1-202ENST00000423271 ZBTB7BO15156 539 aaPredicted RBP18.75■□□□□ 0.59
USB1-202ENST00000423271 ALDH1A1P00352 501 aa18.75■□□□□ 0.59
USB1-202ENST00000423271 ATP8B2P98198 1209 aa18.75■□□□□ 0.59
USB1-202ENST00000423271 NOM1Q5C9Z4 860 aaKnown RBP18.75■□□□□ 0.59
USB1-202ENST00000423271 DZIP1Q86YF9 867 aaKnown RBP18.75■□□□□ 0.59
USB1-202ENST00000423271 ZGPATQ8N5A5 531 aaKnown RBP18.75■□□□□ 0.59
USB1-202ENST00000423271 SSH3Q8TE77 659 aa18.75■□□□□ 0.59
USB1-202ENST00000423271 FAM151AQ8WW52 585 aa18.75■□□□□ 0.59
USB1-202ENST00000423271 WRNIP1Q96S55 665 aa18.75■□□□□ 0.59
USB1-202ENST00000423271 PTPN18Q99952 460 aa18.75■□□□□ 0.59
USB1-202ENST00000423271 USP40Q9NVE5 1235 aa18.75■□□□□ 0.59
USB1-202ENST00000423271 FAM198AQ9UFP1 575 aa18.75■□□□□ 0.59
USB1-202ENST00000423271 CSADQ9Y600 493 aa18.75■□□□□ 0.59
USB1-202ENST00000423271 SNCAIPQ9Y6H5 919 aa18.75■□□□□ 0.59
USB1-202ENST00000423271 AK9Q5TCS8 1911 aa18.74■□□□□ 0.59
USB1-202ENST00000423271 TESPA1A2RU30 521 aaPredicted RBP18.74■□□□□ 0.59
USB1-202ENST00000423271 MIGA2Q7L4E1 593 aa18.74■□□□□ 0.59
USB1-202ENST00000423271 PANK1Q8TE04 598 aa18.74■□□□□ 0.59
USB1-202ENST00000423271 ZKSCAN4Q969J2 545 aaPredicted RBP18.74■□□□□ 0.59
USB1-202ENST00000423271 OTUD5Q96G74 571 aa18.74■□□□□ 0.59
USB1-202ENST00000423271 MS4A4AQ96JQ5 239 aa18.74■□□□□ 0.59
USB1-202ENST00000423271 HMG20BQ9P0W2 317 aa18.74■□□□□ 0.59
USB1-202ENST00000423271 RFX7Q2KHR2 1363 aa18.73■□□□□ 0.59
USB1-202ENST00000423271 FKTNO75072 461 aa18.73■□□□□ 0.59
USB1-202ENST00000423271 ARID4AP29374 1257 aaPredicted RBP18.73■□□□□ 0.59
USB1-202ENST00000423271 GORABQ5T7V8 394 aa18.73■□□□□ 0.59
USB1-202ENST00000423271 ZFPM1Q8IX07 1006 aa18.73■□□□□ 0.59
USB1-202ENST00000423271 ZNF384Q8TF68 577 aa18.73■□□□□ 0.59
USB1-202ENST00000423271 BRI3BPQ8WY22 251 aa18.73■□□□□ 0.59
USB1-202ENST00000423271 SPDYE5A6NIY4 337 aa18.72■□□□□ 0.59
USB1-202ENST00000423271 OS9Q13438 667 aaPredicted RBP18.72■□□□□ 0.59
USB1-202ENST00000423271 DCAF15Q66K64 600 aa18.72■□□□□ 0.59
USB1-202ENST00000423271 TBC1D9Q6ZT07 1266 aa18.72■□□□□ 0.59
USB1-202ENST00000423271 SPATA5Q8NB90 893 aa18.72■□□□□ 0.59
USB1-202ENST00000423271 HOOK2Q96ED9 719 aa18.72■□□□□ 0.59
USB1-202ENST00000423271 ZNF341Q9BYN7 854 aa18.72■□□□□ 0.59
USB1-202ENST00000423271 DOCK2Q92608 1830 aa18.72■□□□□ 0.59
USB1-202ENST00000423271 CCL15-CCL14A0A0B4J2E2 113 aa18.71■□□□□ 0.59
USB1-202ENST00000423271 SURF6O75683 361 aaKnown RBP18.71■□□□□ 0.59
USB1-202ENST00000423271 INPP5BP32019 993 aa18.71■□□□□ 0.59
USB1-202ENST00000423271 MCAMP43121 646 aa18.71■□□□□ 0.59
USB1-202ENST00000423271 BTDP43251 543 aa18.71■□□□□ 0.59
USB1-202ENST00000423271 RGS3P49796 1198 aa18.71■□□□□ 0.59
USB1-202ENST00000423271 MECOMQ03112 1051 aa18.71■□□□□ 0.59
USB1-202ENST00000423271 CRHR2Q13324 411 aa18.71■□□□□ 0.59
USB1-202ENST00000423271 CCL15Q16663 113 aa18.71■□□□□ 0.59
USB1-202ENST00000423271 TNNI3KQ59H18 835 aa18.71■□□□□ 0.59
USB1-202ENST00000423271 SPTY2D1Q68D10 685 aaPredicted RBP18.71■□□□□ 0.59
USB1-202ENST00000423271 ERICH6Q7L0X2 663 aa18.71■□□□□ 0.59
USB1-202ENST00000423271 FPGT-TNNI3KV9GXZ4 949 aa18.71■□□□□ 0.59
USB1-202ENST00000423271 MROH7-TTC4A0A0A0MT08 1334 aa18.71■□□□□ 0.59
USB1-202ENST00000423271 DBNDD2Q9BQY9 259 aa18.7■□□□□ 0.58
USB1-202ENST00000423271 IDI2Q9BXS1 227 aa18.7■□□□□ 0.58
USB1-202ENST00000423271 HTTP42858 3142 aa18.7■□□□□ 0.58
USB1-202ENST00000423271 ATRNL1Q5VV63 1379 aa18.69■□□□□ 0.58
USB1-202ENST00000423271 WDHD1O75717 1129 aaPredicted RBP18.69■□□□□ 0.58
USB1-202ENST00000423271 GTF2A2P52657 109 aa18.69■□□□□ 0.58
USB1-202ENST00000423271 OTUD7BQ6GQQ9 843 aa18.69■□□□□ 0.58
USB1-202ENST00000423271 CEP85Q6P2H3 762 aa18.69■□□□□ 0.58
USB1-202ENST00000423271 SH3BP5LQ7L8J4 393 aa18.69■□□□□ 0.58
USB1-202ENST00000423271 ERO1BQ86YB8 467 aa18.69■□□□□ 0.58
USB1-202ENST00000423271 SLF2Q8IX21 1173 aa18.69■□□□□ 0.58
USB1-202ENST00000423271 FAM163AQ96GL9 167 aaPredicted RBP18.69■□□□□ 0.58
USB1-202ENST00000423271 GPR108Q9NPR9 543 aa18.69■□□□□ 0.58
USB1-202ENST00000423271 DDX4Q9NQI0 724 aaKnown RBP18.69■□□□□ 0.58
USB1-202ENST00000423271 HPS5Q9UPZ3 1129 aa18.69■□□□□ 0.58
USB1-202ENST00000423271 NOP58Q9Y2X3 529 aaKnown RBP18.69■□□□□ 0.58
USB1-202ENST00000423271 IRF6O14896 467 aa18.68■□□□□ 0.58
USB1-202ENST00000423271 ENTPD3O75355 529 aa18.68■□□□□ 0.58
USB1-202ENST00000423271 UQCRFS1P1P0C7P4 283 aa18.68■□□□□ 0.58
USB1-202ENST00000423271 FAM43AQ8N2R8 423 aa18.68■□□□□ 0.58
USB1-202ENST00000423271 NSUN4Q96CB9 384 aaKnown RBP18.68■□□□□ 0.58
USB1-202ENST00000423271 SNRKQ9NRH2 765 aa18.68■□□□□ 0.58
USB1-202ENST00000423271 ZNF112Q9UJU3 913 aa18.68■□□□□ 0.58
USB1-202ENST00000423271 GPR75-ASB3A0A0A6YYF3 556 aa18.67■□□□□ 0.58
USB1-202ENST00000423271 SLURP2P0DP57 97 aa18.67■□□□□ 0.58
USB1-202ENST00000423271 RGS19P49795 217 aa18.67■□□□□ 0.58
USB1-202ENST00000423271 SOX10P56693 466 aa18.67■□□□□ 0.58
USB1-202ENST00000423271 RHBDL3P58872 404 aa18.67■□□□□ 0.58
USB1-202ENST00000423271 PPIL2Q13356 520 aa18.67■□□□□ 0.58
USB1-202ENST00000423271 PICALMQ13492 652 aa18.67■□□□□ 0.58
USB1-202ENST00000423271 PKN2Q16513 984 aaKnown RBP18.67■□□□□ 0.58
USB1-202ENST00000423271 TTC39AQ5SRH9 613 aa18.67■□□□□ 0.58
USB1-202ENST00000423271 TLR7Q9NYK1 1049 aaKnown RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms