RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 PPIL2Q13356 520 aa22.59■■□□□ 1.21
VCP-202ENST00000417448 SLC4A10Q6U841 1118 aa22.59■■□□□ 1.21
VCP-202ENST00000417448 BCAR3O75815 825 aa22.58■■□□□ 1.21
VCP-202ENST00000417448 GYG1P46976 350 aa22.58■■□□□ 1.21
VCP-202ENST00000417448 ALDH1L2Q3SY69 923 aa22.58■■□□□ 1.21
VCP-202ENST00000417448 LINS1Q8NG48 757 aa22.58■■□□□ 1.21
VCP-202ENST00000417448 RAET1EQ8TD07 263 aa22.58■■□□□ 1.21
VCP-202ENST00000417448 RNF208Q9H0X6 261 aa22.58■■□□□ 1.21
VCP-202ENST00000417448 CHMP3Q9Y3E7 222 aa22.58■■□□□ 1.21
VCP-202ENST00000417448 NR2E3Q9Y5X4 410 aa22.58■■□□□ 1.21
VCP-202ENST00000417448 MYPNQ86TC9 1320 aa22.57■■□□□ 1.2
VCP-202ENST00000417448 EPHA10Q5JZY3 1008 aa22.57■■□□□ 1.2
VCP-202ENST00000417448 U2AF1L4Q8WU68 220 aaKnown RBP22.57■■□□□ 1.2
VCP-202ENST00000417448 NOB1Q9ULX3 412 aaKnown RBP22.57■■□□□ 1.2
VCP-202ENST00000417448 A0A1W2PPC1 479 aa22.56■■□□□ 1.2
VCP-202ENST00000417448 FARP2O94887 1054 aaPredicted RBP22.56■■□□□ 1.2
VCP-202ENST00000417448 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.56■■□□□ 1.2
VCP-202ENST00000417448 FAM84BQ96KN1 310 aaPredicted RBP22.56■■□□□ 1.2
VCP-202ENST00000417448 FMNL1O95466 1100 aaPredicted RBP22.55■■□□□ 1.2
VCP-202ENST00000417448 CT47B1P0C2W7 299 aaPredicted RBP22.55■■□□□ 1.2
VCP-202ENST00000417448 TNNQ9UQP3 1299 aa22.55■■□□□ 1.2
VCP-202ENST00000417448 HIBADHP31937 336 aaKnown RBP22.54■■□□□ 1.2
VCP-202ENST00000417448 PRKCZQ05513 592 aa22.54■■□□□ 1.2
VCP-202ENST00000417448 BEND3Q5T5X7 828 aa22.54■■□□□ 1.2
VCP-202ENST00000417448 LMBR1LQ6UX01 489 aa22.54■■□□□ 1.2
VCP-202ENST00000417448 LDHAL6AQ6ZMR3 332 aa22.54■■□□□ 1.2
VCP-202ENST00000417448 ANKRD23Q86SG2 305 aa22.54■■□□□ 1.2
VCP-202ENST00000417448 UNC93B1Q9H1C4 597 aa22.54■■□□□ 1.2
VCP-202ENST00000417448 PDHXO00330 501 aa22.53■■□□□ 1.2
VCP-202ENST00000417448 HOXD10P28358 340 aa22.53■■□□□ 1.2
VCP-202ENST00000417448 INPP5BP32019 993 aa22.53■■□□□ 1.2
VCP-202ENST00000417448 PPATQ06203 517 aa22.53■■□□□ 1.2
VCP-202ENST00000417448 MOGSQ13724 837 aa22.53■■□□□ 1.2
VCP-202ENST00000417448 CNNM1Q9NRU3 951 aa22.53■■□□□ 1.2
VCP-202ENST00000417448 BIN2Q9UBW5 565 aaPredicted RBP22.53■■□□□ 1.2
VCP-202ENST00000417448 MNX1P50219 401 aaPredicted RBP22.52■■□□□ 1.2
VCP-202ENST00000417448 STAP2Q9UGK3 403 aa22.52■■□□□ 1.2
VCP-202ENST00000417448 GABRQQ9UN88 632 aa22.52■■□□□ 1.2
VCP-202ENST00000417448 IQSEC3Q9UPP2 1182 aaPredicted RBP22.52■■□□□ 1.2
VCP-202ENST00000417448 SGPL1O95470 568 aa22.51■■□□□ 1.19
VCP-202ENST00000417448 UBXN2AP68543 259 aa22.51■■□□□ 1.19
VCP-202ENST00000417448 UBE4AQ14139 1066 aa22.51■■□□□ 1.19
VCP-202ENST00000417448 FAM83AQ86UY5 434 aa22.51■■□□□ 1.19
VCP-202ENST00000417448 FRAT1Q92837 279 aaPredicted RBP22.51■■□□□ 1.19
VCP-202ENST00000417448 RPAP1Q9BWH6 1393 aaPredicted RBP22.5■■□□□ 1.19
VCP-202ENST00000417448 EVI5O60447 810 aa22.5■■□□□ 1.19
VCP-202ENST00000417448 HDLBPQ00341 1268 aaKnown RBP22.5■■□□□ 1.19
VCP-202ENST00000417448 CCDC57Q2TAC2 916 aa22.5■■□□□ 1.19
VCP-202ENST00000417448 MIGA2Q7L4E1 593 aa22.5■■□□□ 1.19
VCP-202ENST00000417448 KCNH4Q9UQ05 1017 aa22.5■■□□□ 1.19
VCP-202ENST00000417448 PTPRCP08575 1304 aa22.5■■□□□ 1.19
VCP-202ENST00000417448 BCRP11274 1271 aa22.49■■□□□ 1.19
VCP-202ENST00000417448 TAF7LQ5H9L4 462 aa22.49■■□□□ 1.19
VCP-202ENST00000417448 APOBEC3HQ6NTF7 200 aaKnown RBP22.49■■□□□ 1.19
VCP-202ENST00000417448 SLAIN1Q8ND83 568 aa22.49■■□□□ 1.19
VCP-202ENST00000417448 TEKT1Q969V4 418 aa22.49■■□□□ 1.19
VCP-202ENST00000417448 PUS3Q9BZE2 481 aaKnown RBP22.49■■□□□ 1.19
VCP-202ENST00000417448 CHAF1AQ13111 956 aaPredicted RBP22.48■■□□□ 1.19
VCP-202ENST00000417448 ZDHHC15Q96MV8 337 aa22.48■■□□□ 1.19
VCP-202ENST00000417448 SRCIN1Q9C0H9 1055 aa22.48■■□□□ 1.19
VCP-202ENST00000417448 AK9Q5TCS8 1911 aa22.48■■□□□ 1.19
VCP-202ENST00000417448 DOCK3Q8IZD9 2030 aa22.48■■□□□ 1.19
VCP-202ENST00000417448 CYP2C8P10632 490 aa22.47■■□□□ 1.19
VCP-202ENST00000417448 FCGRTP55899 365 aa22.47■■□□□ 1.19
VCP-202ENST00000417448 FKBP1CQ5VVH2 108 aa22.47■■□□□ 1.19
VCP-202ENST00000417448 DCAF15Q66K64 600 aa22.47■■□□□ 1.19
VCP-202ENST00000417448 FBXO33Q7Z6M2 555 aa22.47■■□□□ 1.19
VCP-202ENST00000417448 ZNF341Q9BYN7 854 aa22.47■■□□□ 1.19
VCP-202ENST00000417448 ELNP15502 786 aa22.46■■□□□ 1.19
VCP-202ENST00000417448 GPAT2Q6NUI2 795 aa22.46■■□□□ 1.19
VCP-202ENST00000417448 HOOK2Q96ED9 719 aa22.46■■□□□ 1.19
VCP-202ENST00000417448 TMOD2Q9NZR1 351 aa22.46■■□□□ 1.19
VCP-202ENST00000417448 PTPRFP10586 1907 aa22.46■■□□□ 1.19
VCP-202ENST00000417448 VCANP13611 3396 aa22.46■■□□□ 1.19
VCP-202ENST00000417448 ADCY3O60266 1144 aa22.45■■□□□ 1.18
VCP-202ENST00000417448 INHAP05111 366 aa22.45■■□□□ 1.18
VCP-202ENST00000417448 Q7L0L9 218 aa22.45■■□□□ 1.18
VCP-202ENST00000417448 CLUAP1Q96AJ1 413 aa22.45■■□□□ 1.18
VCP-202ENST00000417448 DEFB118Q96PH6 123 aa22.45■■□□□ 1.18
VCP-202ENST00000417448 PARK7Q99497 189 aaKnown RBP22.45■■□□□ 1.18
VCP-202ENST00000417448 ZNF112Q9UJU3 913 aa22.45■■□□□ 1.18
VCP-202ENST00000417448 GDF15Q99988 308 aa22.44■■□□□ 1.18
VCP-202ENST00000417448 C9orf78Q9NZ63 289 aaPredicted RBP22.44■■□□□ 1.18
VCP-202ENST00000417448 MYH13Q9UKX3 1938 aa22.44■■□□□ 1.18
VCP-202ENST00000417448 GRM8O00222 908 aa22.43■■□□□ 1.18
VCP-202ENST00000417448 ALDH1L1O75891 902 aa22.43■■□□□ 1.18
VCP-202ENST00000417448 FLT3LGP49771 235 aa22.43■■□□□ 1.18
VCP-202ENST00000417448 DEFB123Q8N688 67 aa22.43■■□□□ 1.18
VCP-202ENST00000417448 DIS3LQ8TF46 1054 aaKnown RBP22.43■■□□□ 1.18
VCP-202ENST00000417448 TBC1D22AQ8WUA7 517 aa22.43■■□□□ 1.18
VCP-202ENST00000417448 PAWRQ96IZ0 340 aaKnown RBP22.43■■□□□ 1.18
VCP-202ENST00000417448 MRIQ9BWK5 157 aa22.43■■□□□ 1.18
VCP-202ENST00000417448 API5Q9BZZ5 524 aaKnown RBP22.43■■□□□ 1.18
VCP-202ENST00000417448 PAK6Q9NQU5 681 aaPredicted RBP22.43■■□□□ 1.18
VCP-202ENST00000417448 KIF16BQ96L93 1317 aa22.42■■□□□ 1.18
VCP-202ENST00000417448 TFRCP02786 760 aaKnown RBP22.42■■□□□ 1.18
VCP-202ENST00000417448 NBPF7P0C2Y1 421 aaPredicted RBP22.42■■□□□ 1.18
VCP-202ENST00000417448 GPR153Q6NV75 609 aa22.42■■□□□ 1.18
VCP-202ENST00000417448 VPS37DQ86XT2 251 aa22.42■■□□□ 1.18
VCP-202ENST00000417448 CRISPLD2Q9H0B8 497 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms