RNA–Protein interactions for RNA: ENST00000417437.6

VNN3-205, Transcript of vanin 3, humanhuman

TSL 1 (best) BASIC

Gene VNN3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-205ENST00000417437 PALD1Q9ULE6 856 aa8.1□□□□□ -1.11
VNN3-205ENST00000417437 SCAF8Q9UPN6 1271 aaKnown RBP8.1□□□□□ -1.11
VNN3-205ENST00000417437 ZKSCAN5Q9Y2L8 839 aa8.1□□□□□ -1.11
VNN3-205ENST00000417437 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.1□□□□□ -1.11
VNN3-205ENST00000417437 SCN9AQ15858 1988 aa8.1□□□□□ -1.11
VNN3-205ENST00000417437 DUOX1Q9NRD9 1551 aa8.1□□□□□ -1.11
VNN3-205ENST00000417437 RTL9Q8NET4 1388 aa8.1□□□□□ -1.11
VNN3-205ENST00000417437 PITPNM2Q9BZ72 1349 aa8.09□□□□□ -1.11
VNN3-205ENST00000417437 KIAA0100Q14667 2235 aaKnown RBP8.09□□□□□ -1.11
VNN3-205ENST00000417437 USP17L3A6NCW0 530 aa8.09□□□□□ -1.11
VNN3-205ENST00000417437 USP17L4A6NCW7 530 aa8.09□□□□□ -1.11
VNN3-205ENST00000417437 ATP5J2-PTCD1G3V325 749 aa8.09□□□□□ -1.11
VNN3-205ENST00000417437 IRS4O14654 1257 aaPredicted RBP8.09□□□□□ -1.11
VNN3-205ENST00000417437 PTMAP06454 111 aaKnown RBP8.09□□□□□ -1.11
VNN3-205ENST00000417437 NOL8Q76FK4 1167 aaKnown RBP8.09□□□□□ -1.11
VNN3-205ENST00000417437 USP17L1Q7RTZ2 530 aa8.09□□□□□ -1.11
VNN3-205ENST00000417437 FAM184AQ8NB25 1140 aa8.09□□□□□ -1.11
VNN3-205ENST00000417437 GPATCH3Q96I76 525 aa8.09□□□□□ -1.11
VNN3-205ENST00000417437 ZSCAN31Q96LW9 406 aaPredicted RBP8.09□□□□□ -1.11
VNN3-205ENST00000417437 IL1RAPL2Q9NP60 686 aa8.09□□□□□ -1.11
VNN3-205ENST00000417437 LIMCH1Q9UPQ0 1083 aa8.09□□□□□ -1.11
VNN3-205ENST00000417437 ATP6V1DQ9Y5K8 247 aa8.09□□□□□ -1.11
VNN3-205ENST00000417437 TTC41PQ6P2S7 1318 aa8.08□□□□□ -1.12
VNN3-205ENST00000417437 SGSM2O43147 1006 aa8.08□□□□□ -1.12
VNN3-205ENST00000417437 SRGAP3O43295 1099 aa8.08□□□□□ -1.12
VNN3-205ENST00000417437 ZSCAN22P10073 491 aaPredicted RBP8.08□□□□□ -1.12
VNN3-205ENST00000417437 PDIA4P13667 645 aaKnown RBP8.08□□□□□ -1.12
VNN3-205ENST00000417437 ZNF280AP59817 542 aaPredicted RBP8.08□□□□□ -1.12
VNN3-205ENST00000417437 OS9Q13438 667 aaPredicted RBP8.08□□□□□ -1.12
VNN3-205ENST00000417437 PDIA6Q15084 440 aa8.08□□□□□ -1.12
VNN3-205ENST00000417437 SF3B3Q15393 1217 aaKnown RBP8.08□□□□□ -1.12
VNN3-205ENST00000417437 NOM1Q5C9Z4 860 aaKnown RBP8.08□□□□□ -1.12
VNN3-205ENST00000417437 CCDC183Q5T5S1 534 aa8.08□□□□□ -1.12
VNN3-205ENST00000417437 OTUD7BQ6GQQ9 843 aa8.08□□□□□ -1.12
VNN3-205ENST00000417437 ANKRD13DQ6ZTN6 518 aa8.08□□□□□ -1.12
VNN3-205ENST00000417437 TMEM87AQ8NBN3 555 aa8.08□□□□□ -1.12
VNN3-205ENST00000417437 PLBD2Q8NHP8 589 aa8.08□□□□□ -1.12
VNN3-205ENST00000417437 DNAAF4Q8WXU2 420 aa8.08□□□□□ -1.12
VNN3-205ENST00000417437 SLC10A4Q96EP9 437 aa8.08□□□□□ -1.12
VNN3-205ENST00000417437 ERO1AQ96HE7 468 aa8.08□□□□□ -1.12
VNN3-205ENST00000417437 SMC3Q9UQE7 1217 aa8.08□□□□□ -1.12
VNN3-205ENST00000417437 SNX14Q9Y5W7 946 aa8.08□□□□□ -1.12
VNN3-205ENST00000417437 RAD50Q92878 1312 aa8.07□□□□□ -1.12
VNN3-205ENST00000417437 POTEFA5A3E0 1075 aa8.07□□□□□ -1.12
VNN3-205ENST00000417437 MANSC4A6NHS7 340 aaPredicted RBP8.07□□□□□ -1.12
VNN3-205ENST00000417437 ALDH1L1O75891 902 aa8.07□□□□□ -1.12
VNN3-205ENST00000417437 GLRX3O76003 335 aaKnown RBP8.07□□□□□ -1.12
VNN3-205ENST00000417437 MAP4K4O95819 1239 aaPredicted RBP8.07□□□□□ -1.12
VNN3-205ENST00000417437 INHBEP58166 350 aa8.07□□□□□ -1.12
VNN3-205ENST00000417437 NBPF9Q3BBW0 867 aa8.07□□□□□ -1.12
VNN3-205ENST00000417437 CCDC152Q4G0S7 254 aa8.07□□□□□ -1.12
VNN3-205ENST00000417437 BEND3Q5T5X7 828 aa8.07□□□□□ -1.12
VNN3-205ENST00000417437 RIC3Q7Z5B4 369 aa8.07□□□□□ -1.12
VNN3-205ENST00000417437 ERC1Q8IUD2 1116 aa8.07□□□□□ -1.12
VNN3-205ENST00000417437 PI4K2BQ8TCG2 481 aa8.07□□□□□ -1.12
VNN3-205ENST00000417437 MAP7D2Q96T17 732 aa8.07□□□□□ -1.12
VNN3-205ENST00000417437 UPF3BQ9BZI7 483 aaKnown RBP8.07□□□□□ -1.12
VNN3-205ENST00000417437 LSG1Q9H089 658 aaKnown RBP8.07□□□□□ -1.12
VNN3-205ENST00000417437 PDCL3Q9H2J4 239 aa8.07□□□□□ -1.12
VNN3-205ENST00000417437 PHAXQ9H814 394 aaKnown RBP8.07□□□□□ -1.12
VNN3-205ENST00000417437 DIAPH3Q9NSV4 1193 aa8.07□□□□□ -1.12
VNN3-205ENST00000417437 ANGEL1Q9UNK9 670 aaKnown RBP8.07□□□□□ -1.12
VNN3-205ENST00000417437 R3HCC1Q9Y3T6 440 aaKnown RBP8.07□□□□□ -1.12
VNN3-205ENST00000417437 PSME4Q14997 1843 aa8.06□□□□□ -1.12
VNN3-205ENST00000417437 TCHHQ07283 1943 aa8.06□□□□□ -1.12
VNN3-205ENST00000417437 HIP1O00291 1037 aa8.06□□□□□ -1.12
VNN3-205ENST00000417437 STX6O43752 255 aa8.06□□□□□ -1.12
VNN3-205ENST00000417437 ATP2B4P23634 1241 aa8.06□□□□□ -1.12
VNN3-205ENST00000417437 PTPN12Q05209 780 aaKnown RBP8.06□□□□□ -1.12
VNN3-205ENST00000417437 ARHGEF6Q15052 776 aa8.06□□□□□ -1.12
VNN3-205ENST00000417437 SLC4A8Q2Y0W8 1093 aa8.06□□□□□ -1.12
VNN3-205ENST00000417437 OTOP1Q7RTM1 612 aa8.06□□□□□ -1.12
VNN3-205ENST00000417437 PODNQ7Z5L7 613 aa8.06□□□□□ -1.12
VNN3-205ENST00000417437 NBPF11Q86T75 865 aa8.06□□□□□ -1.12
VNN3-205ENST00000417437 APOBEC3FQ8IUX4 373 aaKnown RBP8.06□□□□□ -1.12
VNN3-205ENST00000417437 ANKRD18AQ8IVF6 992 aa8.06□□□□□ -1.12
VNN3-205ENST00000417437 CLASRPQ8N2M8 674 aaKnown RBP8.06□□□□□ -1.12
VNN3-205ENST00000417437 RNF214Q8ND24 703 aa8.06□□□□□ -1.12
VNN3-205ENST00000417437 CHAMP1Q96JM3 812 aa8.06□□□□□ -1.12
VNN3-205ENST00000417437 TTC14Q96N46 770 aa8.06□□□□□ -1.12
VNN3-205ENST00000417437 CCDC85AQ96PX6 553 aaPredicted RBP8.06□□□□□ -1.12
VNN3-205ENST00000417437 TM6SF1Q9BZW5 370 aa8.06□□□□□ -1.12
VNN3-205ENST00000417437 SEC31BQ9NQW1 1179 aa8.06□□□□□ -1.12
VNN3-205ENST00000417437 SH2B1Q9NRF2 756 aaPredicted RBP8.06□□□□□ -1.12
VNN3-205ENST00000417437 PDRG1Q9NUG6 133 aa8.06□□□□□ -1.12
VNN3-205ENST00000417437 PODXL2Q9NZ53 605 aa8.06□□□□□ -1.12
VNN3-205ENST00000417437 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.06□□□□□ -1.12
VNN3-205ENST00000417437 CHPF2Q9P2E5 772 aa8.06□□□□□ -1.12
VNN3-205ENST00000417437 XDHP47989 1333 aa8.05□□□□□ -1.12
VNN3-205ENST00000417437 PI4KAP2A4QPH2 592 aa8.05□□□□□ -1.12
VNN3-205ENST00000417437 PPP1R12BO60237 982 aaPredicted RBP8.05□□□□□ -1.12
VNN3-205ENST00000417437 GADD45BO75293 160 aaPredicted RBP8.05□□□□□ -1.12
VNN3-205ENST00000417437 SASH1O94885 1247 aa8.05□□□□□ -1.12
VNN3-205ENST00000417437 IFIT2P09913 472 aaKnown RBP8.05□□□□□ -1.12
VNN3-205ENST00000417437 EN2P19622 333 aaPredicted RBP8.05□□□□□ -1.12
VNN3-205ENST00000417437 FXR1P51114 621 aaKnown RBP eCLIP8.05□□□□□ -1.12
VNN3-205ENST00000417437 AK2P54819 239 aa8.05□□□□□ -1.12
VNN3-205ENST00000417437 UBE2HP62256 183 aa8.05□□□□□ -1.12
VNN3-205ENST00000417437 VPS53Q5VIR6 699 aa8.05□□□□□ -1.12
VNN3-205ENST00000417437 SPRYD7Q5W111 196 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms