RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 SSH3Q8TE77 659 aa22.11■■□□□ 1.13
CPNE1-210ENST00000416778 FAM151AQ8WW52 585 aa22.11■■□□□ 1.13
CPNE1-210ENST00000416778 PTPN18Q99952 460 aa22.11■■□□□ 1.13
CPNE1-210ENST00000416778 USP40Q9NVE5 1235 aa22.11■■□□□ 1.13
CPNE1-210ENST00000416778 PDS5AQ29RF7 1337 aaKnown RBP22.1■■□□□ 1.13
CPNE1-210ENST00000416778 IGF2BP3O00425 579 aaKnown RBP eCLIP22.1■■□□□ 1.13
CPNE1-210ENST00000416778 CTU1Q7Z7A3 348 aaKnown RBP22.1■■□□□ 1.13
CPNE1-210ENST00000416778 ZGPATQ8N5A5 531 aaKnown RBP22.1■■□□□ 1.13
CPNE1-210ENST00000416778 OPTNQ96CV9 577 aa22.1■■□□□ 1.13
CPNE1-210ENST00000416778 FAM163AQ96GL9 167 aaPredicted RBP22.1■■□□□ 1.13
CPNE1-210ENST00000416778 MS4A4AQ96JQ5 239 aa22.1■■□□□ 1.13
CPNE1-210ENST00000416778 ARAP2Q8WZ64 1704 aa22.09■■□□□ 1.13
CPNE1-210ENST00000416778 VGLL4Q14135 290 aa22.09■■□□□ 1.13
CPNE1-210ENST00000416778 FTSJ3Q8IY81 847 aaKnown RBP22.09■■□□□ 1.13
CPNE1-210ENST00000416778 CNKSR2Q8WXI2 1034 aa22.09■■□□□ 1.13
CPNE1-210ENST00000416778 NFIAQ12857 509 aa22.08■■□□□ 1.13
CPNE1-210ENST00000416778 HOOK2Q96ED9 719 aa22.08■■□□□ 1.13
CPNE1-210ENST00000416778 HMG20BQ9P0W2 317 aa22.08■■□□□ 1.13
CPNE1-210ENST00000416778 FAM198AQ9UFP1 575 aa22.08■■□□□ 1.13
CPNE1-210ENST00000416778 ABCF2Q9UG63 623 aa22.08■■□□□ 1.13
CPNE1-210ENST00000416778 RGS19P49795 217 aa22.07■■□□□ 1.12
CPNE1-210ENST00000416778 TCP10Q12799 353 aa22.07■■□□□ 1.12
CPNE1-210ENST00000416778 SPTY2D1Q68D10 685 aaPredicted RBP22.07■■□□□ 1.12
CPNE1-210ENST00000416778 MIGA2Q7L4E1 593 aa22.07■■□□□ 1.12
CPNE1-210ENST00000416778 ITPRIPQ8IWB1 547 aa22.07■■□□□ 1.12
CPNE1-210ENST00000416778 ZFPM1Q8IX07 1006 aa22.07■■□□□ 1.12
CPNE1-210ENST00000416778 C1orf115Q9H7X2 142 aa22.07■■□□□ 1.12
CPNE1-210ENST00000416778 CSADQ9Y600 493 aa22.07■■□□□ 1.12
CPNE1-210ENST00000416778 FKTNO75072 461 aa22.06■■□□□ 1.12
CPNE1-210ENST00000416778 GORABQ5T7V8 394 aa22.06■■□□□ 1.12
CPNE1-210ENST00000416778 ZKSCAN4Q969J2 545 aaPredicted RBP22.06■■□□□ 1.12
CPNE1-210ENST00000416778 GPR108Q9NPR9 543 aa22.06■■□□□ 1.12
CPNE1-210ENST00000416778 NOP58Q9Y2X3 529 aaKnown RBP22.06■■□□□ 1.12
CPNE1-210ENST00000416778 GAKO14976 1311 aa22.06■■□□□ 1.12
CPNE1-210ENST00000416778 SURF6O75683 361 aaKnown RBP22.05■■□□□ 1.12
CPNE1-210ENST00000416778 DCAF15Q66K64 600 aa22.05■■□□□ 1.12
CPNE1-210ENST00000416778 OTUD7BQ6GQQ9 843 aa22.05■■□□□ 1.12
CPNE1-210ENST00000416778 SPATA5Q8NB90 893 aa22.05■■□□□ 1.12
CPNE1-210ENST00000416778 ZNF384Q8TF68 577 aa22.05■■□□□ 1.12
CPNE1-210ENST00000416778 IDI2Q9BXS1 227 aa22.05■■□□□ 1.12
CPNE1-210ENST00000416778 ZNF112Q9UJU3 913 aa22.05■■□□□ 1.12
CPNE1-210ENST00000416778 SNCAIPQ9Y6H5 919 aa22.05■■□□□ 1.12
CPNE1-210ENST00000416778 ARID4AP29374 1257 aaPredicted RBP22.04■■□□□ 1.12
CPNE1-210ENST00000416778 MECOMQ03112 1051 aa22.04■■□□□ 1.12
CPNE1-210ENST00000416778 PKN2Q16513 984 aaKnown RBP22.04■■□□□ 1.12
CPNE1-210ENST00000416778 TBC1D9Q6ZT07 1266 aa22.04■■□□□ 1.12
CPNE1-210ENST00000416778 ERICH6Q7L0X2 663 aa22.04■■□□□ 1.12
CPNE1-210ENST00000416778 SLF2Q8IX21 1173 aa22.04■■□□□ 1.12
CPNE1-210ENST00000416778 PANK1Q8TE04 598 aa22.04■■□□□ 1.12
CPNE1-210ENST00000416778 WRNIP1Q96S55 665 aa22.04■■□□□ 1.12
CPNE1-210ENST00000416778 ZNF341Q9BYN7 854 aa22.04■■□□□ 1.12
CPNE1-210ENST00000416778 RPAP1Q9BWH6 1393 aaPredicted RBP22.03■■□□□ 1.12
CPNE1-210ENST00000416778 SPDYE5A6NIY4 337 aa22.03■■□□□ 1.12
CPNE1-210ENST00000416778 GTF2A2P52657 109 aa22.03■■□□□ 1.12
CPNE1-210ENST00000416778 PI16Q6UXB8 463 aa22.03■■□□□ 1.12
CPNE1-210ENST00000416778 ERO1BQ86YB8 467 aa22.03■■□□□ 1.12
CPNE1-210ENST00000416778 DZIP1Q86YF9 867 aaKnown RBP22.03■■□□□ 1.12
CPNE1-210ENST00000416778 BRI3BPQ8WY22 251 aa22.03■■□□□ 1.12
CPNE1-210ENST00000416778 GPR75-ASB3A0A0A6YYF3 556 aa22.02■■□□□ 1.12
CPNE1-210ENST00000416778 UQCRFS1P1P0C7P4 283 aa22.02■■□□□ 1.12
CPNE1-210ENST00000416778 TNNI3KQ59H18 835 aa22.02■■□□□ 1.12
CPNE1-210ENST00000416778 OTUD5Q96G74 571 aa22.02■■□□□ 1.12
CPNE1-210ENST00000416778 FPGT-TNNI3KV9GXZ4 949 aa22.02■■□□□ 1.12
CPNE1-210ENST00000416778 ENTPD3O75355 529 aa22.01■■□□□ 1.11
CPNE1-210ENST00000416778 INPP5BP32019 993 aa22.01■■□□□ 1.11
CPNE1-210ENST00000416778 MCAMP43121 646 aa22.01■■□□□ 1.11
CPNE1-210ENST00000416778 RGS3P49796 1198 aa22.01■■□□□ 1.11
CPNE1-210ENST00000416778 CRHR2Q13324 411 aa22.01■■□□□ 1.11
CPNE1-210ENST00000416778 NSUN4Q96CB9 384 aaKnown RBP22.01■■□□□ 1.11
CPNE1-210ENST00000416778 CCL15-CCL14A0A0B4J2E2 113 aa22■■□□□ 1.11
CPNE1-210ENST00000416778 IRF6O14896 467 aa22■■□□□ 1.11
CPNE1-210ENST00000416778 WDHD1O75717 1129 aaPredicted RBP22■■□□□ 1.11
CPNE1-210ENST00000416778 MAP3K10Q02779 954 aa22■■□□□ 1.11
CPNE1-210ENST00000416778 OS9Q13438 667 aaPredicted RBP22■■□□□ 1.11
CPNE1-210ENST00000416778 CCL15Q16663 113 aa22■■□□□ 1.11
CPNE1-210ENST00000416778 SH3BP5LQ7L8J4 393 aa22■■□□□ 1.11
CPNE1-210ENST00000416778 DBNDD2Q9BQY9 259 aa22■■□□□ 1.11
CPNE1-210ENST00000416778 LDHCP07864 332 aa21.99■■□□□ 1.11
CPNE1-210ENST00000416778 BTDP43251 543 aa21.99■■□□□ 1.11
CPNE1-210ENST00000416778 RHBDL3P58872 404 aa21.99■■□□□ 1.11
CPNE1-210ENST00000416778 PPATQ06203 517 aa21.99■■□□□ 1.11
CPNE1-210ENST00000416778 CEP85Q6P2H3 762 aa21.99■■□□□ 1.11
CPNE1-210ENST00000416778 HPS5Q9UPZ3 1129 aa21.99■■□□□ 1.11
CPNE1-210ENST00000416778 MROH7-TTC4A0A0A0MT08 1334 aa21.99■■□□□ 1.11
CPNE1-210ENST00000416778 PHF20L1A8MW92 1017 aa21.98■■□□□ 1.11
CPNE1-210ENST00000416778 MS4A1P11836 297 aa21.98■■□□□ 1.11
CPNE1-210ENST00000416778 PPIL2Q13356 520 aa21.98■■□□□ 1.11
CPNE1-210ENST00000416778 CCDC158Q5M9N0 1113 aa21.98■■□□□ 1.11
CPNE1-210ENST00000416778 FAM43AQ8N2R8 423 aa21.98■■□□□ 1.11
CPNE1-210ENST00000416778 ZNF512BQ96KM6 892 aaPredicted RBP21.98■■□□□ 1.11
CPNE1-210ENST00000416778 DDX4Q9NQI0 724 aaKnown RBP21.98■■□□□ 1.11
CPNE1-210ENST00000416778 SNRKQ9NRH2 765 aa21.98■■□□□ 1.11
CPNE1-210ENST00000416778 MYH13Q9UKX3 1938 aa21.98■■□□□ 1.11
CPNE1-210ENST00000416778 DDTLA6NHG4 134 aaPredicted RBP21.97■■□□□ 1.11
CPNE1-210ENST00000416778 CETPP11597 493 aa21.97■■□□□ 1.11
CPNE1-210ENST00000416778 GSTO1P78417 241 aa21.97■■□□□ 1.11
CPNE1-210ENST00000416778 EAF2Q96CJ1 260 aaPredicted RBP21.97■■□□□ 1.11
CPNE1-210ENST00000416778 RAI14Q9P0K7 980 aa21.97■■□□□ 1.11
CPNE1-210ENST00000416778 NPM3O75607 178 aaKnown RBP21.96■■□□□ 1.11
CPNE1-210ENST00000416778 SNAPC2Q13487 334 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 131.9 ms