RNA–Protein interactions for RNA: ENST00000412218.1

LINC01643-201, Transcript of long intergenic non-protein coding RNA 1643, humanhuman

TSL 5 BASIC

Gene LINC01643, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01643-201ENST00000412218 ITPRIPQ8IWB1 547 aa12.54□□□□□ -0.4
LINC01643-201ENST00000412218 ZGPATQ8N5A5 531 aaKnown RBP12.54□□□□□ -0.4
LINC01643-201ENST00000412218 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.54□□□□□ -0.4
LINC01643-201ENST00000412218 SSH3Q8TE77 659 aa12.54□□□□□ -0.4
LINC01643-201ENST00000412218 CCDC136Q96JN2 1154 aa12.54□□□□□ -0.4
LINC01643-201ENST00000412218 ELP3Q9H9T3 547 aa12.54□□□□□ -0.4
LINC01643-201ENST00000412218 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.54□□□□□ -0.4
LINC01643-201ENST00000412218 AKAP11Q9UKA4 1901 aa12.53□□□□□ -0.4
LINC01643-201ENST00000412218 ZBTB7BO15156 539 aaPredicted RBP12.53□□□□□ -0.4
LINC01643-201ENST00000412218 INHBEP58166 350 aa12.53□□□□□ -0.4
LINC01643-201ENST00000412218 G3BP1Q13283 466 aaKnown RBP eCLIP12.53□□□□□ -0.4
LINC01643-201ENST00000412218 VGLL4Q14135 290 aa12.53□□□□□ -0.4
LINC01643-201ENST00000412218 NOM1Q5C9Z4 860 aaKnown RBP12.53□□□□□ -0.4
LINC01643-201ENST00000412218 CDC42EP5Q6NZY7 148 aa12.53□□□□□ -0.4
LINC01643-201ENST00000412218 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.53□□□□□ -0.4
LINC01643-201ENST00000412218 IFNL1Q8IU54 200 aa12.53□□□□□ -0.4
LINC01643-201ENST00000412218 OPTNQ96CV9 577 aa12.53□□□□□ -0.4
LINC01643-201ENST00000412218 C1orf115Q9H7X2 142 aa12.53□□□□□ -0.4
LINC01643-201ENST00000412218 TSHZ2Q9NRE2 1034 aa12.53□□□□□ -0.4
LINC01643-201ENST00000412218 GAKO14976 1311 aa12.53□□□□□ -0.4
LINC01643-201ENST00000412218 RFX7Q2KHR2 1363 aa12.53□□□□□ -0.4
LINC01643-201ENST00000412218 IGF2BP3O00425 579 aaKnown RBP eCLIP12.52□□□□□ -0.41
LINC01643-201ENST00000412218 ALDH1A1P00352 501 aa12.52□□□□□ -0.41
LINC01643-201ENST00000412218 MAP3K9P80192 1104 aa12.52□□□□□ -0.41
LINC01643-201ENST00000412218 ATP8B2P98198 1209 aa12.52□□□□□ -0.41
LINC01643-201ENST00000412218 NFIAQ12857 509 aa12.52□□□□□ -0.41
LINC01643-201ENST00000412218 DZIP1Q86YF9 867 aaKnown RBP12.52□□□□□ -0.41
LINC01643-201ENST00000412218 ZNF296Q8WUU4 475 aaPredicted RBP12.52□□□□□ -0.41
LINC01643-201ENST00000412218 HOOK2Q96ED9 719 aa12.52□□□□□ -0.41
LINC01643-201ENST00000412218 NEUROD6Q96NK8 337 aa12.52□□□□□ -0.41
LINC01643-201ENST00000412218 CSADQ9Y600 493 aa12.52□□□□□ -0.41
LINC01643-201ENST00000412218 TESPA1A2RU30 521 aaPredicted RBP12.51□□□□□ -0.41
LINC01643-201ENST00000412218 CCDC85CA6NKD9 419 aa12.51□□□□□ -0.41
LINC01643-201ENST00000412218 GPR25O00155 361 aa12.51□□□□□ -0.41
LINC01643-201ENST00000412218 ARID4AP29374 1257 aaPredicted RBP12.51□□□□□ -0.41
LINC01643-201ENST00000412218 PI16Q6UXB8 463 aa12.51□□□□□ -0.41
LINC01643-201ENST00000412218 CTU1Q7Z7A3 348 aaKnown RBP12.51□□□□□ -0.41
LINC01643-201ENST00000412218 FAM151AQ8WW52 585 aa12.51□□□□□ -0.41
LINC01643-201ENST00000412218 CNKSR2Q8WXI2 1034 aa12.51□□□□□ -0.41
LINC01643-201ENST00000412218 WRNIP1Q96S55 665 aa12.51□□□□□ -0.41
LINC01643-201ENST00000412218 R3HDMLQ9H3Y0 253 aa12.51□□□□□ -0.41
LINC01643-201ENST00000412218 GPR108Q9NPR9 543 aa12.51□□□□□ -0.41
LINC01643-201ENST00000412218 USP40Q9NVE5 1235 aa12.51□□□□□ -0.41
LINC01643-201ENST00000412218 HMG20BQ9P0W2 317 aa12.51□□□□□ -0.41
LINC01643-201ENST00000412218 FAM198AQ9UFP1 575 aa12.51□□□□□ -0.41
LINC01643-201ENST00000412218 ABCF2Q9UG63 623 aa12.51□□□□□ -0.41
LINC01643-201ENST00000412218 SNCAIPQ9Y6H5 919 aa12.51□□□□□ -0.41
LINC01643-201ENST00000412218 SPDYE5A6NIY4 337 aa12.5□□□□□ -0.41
LINC01643-201ENST00000412218 TCP10Q12799 353 aa12.5□□□□□ -0.41
LINC01643-201ENST00000412218 TNNI3KQ59H18 835 aa12.5□□□□□ -0.41
LINC01643-201ENST00000412218 GORABQ5T7V8 394 aa12.5□□□□□ -0.41
LINC01643-201ENST00000412218 DCAF15Q66K64 600 aa12.5□□□□□ -0.41
LINC01643-201ENST00000412218 SPTY2D1Q68D10 685 aaPredicted RBP12.5□□□□□ -0.41
LINC01643-201ENST00000412218 SPATA5Q8NB90 893 aa12.5□□□□□ -0.41
LINC01643-201ENST00000412218 PANK1Q8TE04 598 aa12.5□□□□□ -0.41
LINC01643-201ENST00000412218 FAM163AQ96GL9 167 aaPredicted RBP12.5□□□□□ -0.41
LINC01643-201ENST00000412218 MS4A4AQ96JQ5 239 aa12.5□□□□□ -0.41
LINC01643-201ENST00000412218 NOP58Q9Y2X3 529 aaKnown RBP12.5□□□□□ -0.41
LINC01643-201ENST00000412218 FPGT-TNNI3KV9GXZ4 949 aa12.5□□□□□ -0.41
LINC01643-201ENST00000412218 MROH7-TTC4A0A0A0MT08 1334 aa12.5□□□□□ -0.41
LINC01643-201ENST00000412218 CASP8AP2Q9UKL3 1982 aa12.5□□□□□ -0.41
LINC01643-201ENST00000412218 ATRNL1Q5VV63 1379 aa12.49□□□□□ -0.41
LINC01643-201ENST00000412218 SURF6O75683 361 aaKnown RBP12.49□□□□□ -0.41
LINC01643-201ENST00000412218 UQCRFS1P1P0C7P4 283 aa12.49□□□□□ -0.41
LINC01643-201ENST00000412218 MCAMP43121 646 aa12.49□□□□□ -0.41
LINC01643-201ENST00000412218 BTDP43251 543 aa12.49□□□□□ -0.41
LINC01643-201ENST00000412218 MECOMQ03112 1051 aa12.49□□□□□ -0.41
LINC01643-201ENST00000412218 OS9Q13438 667 aaPredicted RBP12.49□□□□□ -0.41
LINC01643-201ENST00000412218 CEP85Q6P2H3 762 aa12.49□□□□□ -0.41
LINC01643-201ENST00000412218 ERICH6Q7L0X2 663 aa12.49□□□□□ -0.41
LINC01643-201ENST00000412218 SLF2Q8IX21 1173 aa12.49□□□□□ -0.41
LINC01643-201ENST00000412218 EXOC6Q8TAG9 804 aa12.49□□□□□ -0.41
LINC01643-201ENST00000412218 ZNF384Q8TF68 577 aa12.49□□□□□ -0.41
LINC01643-201ENST00000412218 ZKSCAN4Q969J2 545 aaPredicted RBP12.49□□□□□ -0.41
LINC01643-201ENST00000412218 OTUD5Q96G74 571 aa12.49□□□□□ -0.41
LINC01643-201ENST00000412218 PTPN18Q99952 460 aa12.49□□□□□ -0.41
LINC01643-201ENST00000412218 IDI2Q9BXS1 227 aa12.49□□□□□ -0.41
LINC01643-201ENST00000412218 ZNF341Q9BYN7 854 aa12.49□□□□□ -0.41
LINC01643-201ENST00000412218 FKTNO75072 461 aa12.48□□□□□ -0.41
LINC01643-201ENST00000412218 ENTPD3O75355 529 aa12.48□□□□□ -0.41
LINC01643-201ENST00000412218 GTF2A2P52657 109 aa12.48□□□□□ -0.41
LINC01643-201ENST00000412218 OTUD7BQ6GQQ9 843 aa12.48□□□□□ -0.41
LINC01643-201ENST00000412218 MIGA2Q7L4E1 593 aa12.48□□□□□ -0.41
LINC01643-201ENST00000412218 ZFPM1Q8IX07 1006 aa12.48□□□□□ -0.41
LINC01643-201ENST00000412218 BRI3BPQ8WY22 251 aa12.48□□□□□ -0.41
LINC01643-201ENST00000412218 DBNDD2Q9BQY9 259 aa12.48□□□□□ -0.41
LINC01643-201ENST00000412218 GPR75-ASB3A0A0A6YYF3 556 aa12.47□□□□□ -0.41
LINC01643-201ENST00000412218 WDHD1O75717 1129 aaPredicted RBP12.47□□□□□ -0.41
LINC01643-201ENST00000412218 MS4A1P11836 297 aa12.47□□□□□ -0.41
LINC01643-201ENST00000412218 RGS3P49796 1198 aa12.47□□□□□ -0.41
LINC01643-201ENST00000412218 CRHR2Q13324 411 aa12.47□□□□□ -0.41
LINC01643-201ENST00000412218 PKN2Q16513 984 aaKnown RBP12.47□□□□□ -0.41
LINC01643-201ENST00000412218 TBC1D9Q6ZT07 1266 aa12.47□□□□□ -0.41
LINC01643-201ENST00000412218 ERO1BQ86YB8 467 aa12.47□□□□□ -0.41
LINC01643-201ENST00000412218 NSUN4Q96CB9 384 aaKnown RBP12.47□□□□□ -0.41
LINC01643-201ENST00000412218 DDX4Q9NQI0 724 aaKnown RBP12.47□□□□□ -0.41
LINC01643-201ENST00000412218 ZNF112Q9UJU3 913 aa12.47□□□□□ -0.41
LINC01643-201ENST00000412218 MAST2Q6P0Q8 1798 aa12.46□□□□□ -0.41
LINC01643-201ENST00000412218 CCL15-CCL14A0A0B4J2E2 113 aa12.46□□□□□ -0.41
LINC01643-201ENST00000412218 INPP5BP32019 993 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms