RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 NAPBQ9H115 298 aa15.9■□□□□ 0.14
LIMS1-205ENST00000410093 RNF41Q9H4P4 317 aaPredicted RBP15.9■□□□□ 0.14
LIMS1-205ENST00000410093 DDX19AQ9NUU7 478 aaKnown RBP15.9■□□□□ 0.14
LIMS1-205ENST00000410093 MYH13Q9UKX3 1938 aa15.9■□□□□ 0.14
LIMS1-205ENST00000410093 MMP10P09238 476 aa15.89■□□□□ 0.13
LIMS1-205ENST00000410093 LIFRP42702 1097 aa15.89■□□□□ 0.13
LIMS1-205ENST00000410093 RCAN1P53805 252 aa15.89■□□□□ 0.13
LIMS1-205ENST00000410093 IFNL3Q8IZI9 196 aa15.89■□□□□ 0.13
LIMS1-205ENST00000410093 PDLIM2Q96JY6 352 aa15.89■□□□□ 0.13
LIMS1-205ENST00000410093 LRRC2Q9BYS8 371 aa15.89■□□□□ 0.13
LIMS1-205ENST00000410093 WWC3Q9ULE0 1092 aa15.89■□□□□ 0.13
LIMS1-205ENST00000410093 CPLX1O14810 134 aa15.89■□□□□ 0.13
LIMS1-205ENST00000410093 CTDNEP1O95476 244 aa15.89■□□□□ 0.13
LIMS1-205ENST00000410093 TTC6Q86TZ1 520 aa15.89■□□□□ 0.13
LIMS1-205ENST00000410093 NBPF5PQ86XG9 351 aaPredicted RBP15.89■□□□□ 0.13
LIMS1-205ENST00000410093 TMTC2Q8N394 836 aa15.89■□□□□ 0.13
LIMS1-205ENST00000410093 LEO1Q8WVC0 666 aaPredicted RBP15.89■□□□□ 0.13
LIMS1-205ENST00000410093 LRP2BPQ9P2M1 347 aa15.89■□□□□ 0.13
LIMS1-205ENST00000410093 PARP3Q9Y6F1 533 aa15.89■□□□□ 0.13
LIMS1-205ENST00000410093 KLF18A0A0U1RQI7 1052 aa15.88■□□□□ 0.13
LIMS1-205ENST00000410093 GRIN3BO60391 1043 aa15.88■□□□□ 0.13
LIMS1-205ENST00000410093 CAVIN2O95810 425 aa15.88■□□□□ 0.13
LIMS1-205ENST00000410093 BCAMP50895 628 aa15.88■□□□□ 0.13
LIMS1-205ENST00000410093 HAND2P61296 217 aa15.88■□□□□ 0.13
LIMS1-205ENST00000410093 RPS8P62241 208 aaKnown RBP15.88■□□□□ 0.13
LIMS1-205ENST00000410093 SART3Q15020 963 aaKnown RBP15.88■□□□□ 0.13
LIMS1-205ENST00000410093 TBC1D9BQ66K14 1250 aa15.88■□□□□ 0.13
LIMS1-205ENST00000410093 GIMAP6Q6P9H5 292 aa15.88■□□□□ 0.13
LIMS1-205ENST00000410093 BRAPQ7Z569 592 aa15.88■□□□□ 0.13
LIMS1-205ENST00000410093 SGMS1Q86VZ5 419 aa15.88■□□□□ 0.13
LIMS1-205ENST00000410093 BCL2L12Q9HB09 334 aa15.88■□□□□ 0.13
LIMS1-205ENST00000410093 MINPP1Q9UNW1 487 aa15.88■□□□□ 0.13
LIMS1-205ENST00000410093 C4AP0C0L4 1744 aa15.88■□□□□ 0.13
LIMS1-205ENST00000410093 NID2Q14112 1375 aa15.87■□□□□ 0.13
LIMS1-205ENST00000410093 KIAA1551Q9HCM1 1747 aa15.87■□□□□ 0.13
LIMS1-205ENST00000410093 GOLGA8BA8MQT2 603 aa15.87■□□□□ 0.13
LIMS1-205ENST00000410093 MBD4O95243 580 aa15.87■□□□□ 0.13
LIMS1-205ENST00000410093 PPP2R5BQ15173 497 aa15.87■□□□□ 0.13
LIMS1-205ENST00000410093 FERMT3Q86UX7 667 aa15.87■□□□□ 0.13
LIMS1-205ENST00000410093 VPS37DQ86XT2 251 aa15.87■□□□□ 0.13
LIMS1-205ENST00000410093 STAG1Q8WVM7 1258 aa15.87■□□□□ 0.13
LIMS1-205ENST00000410093 RCOR1Q9UKL0 485 aa15.87■□□□□ 0.13
LIMS1-205ENST00000410093 MAST2Q6P0Q8 1798 aa15.87■□□□□ 0.13
LIMS1-205ENST00000410093 CCDC88AQ3V6T2 1871 aa15.86■□□□□ 0.13
LIMS1-205ENST00000410093 SH2B2O14492 632 aaPredicted RBP15.86■□□□□ 0.13
LIMS1-205ENST00000410093 CCDC192P0DO97 292 aa15.86■□□□□ 0.13
LIMS1-205ENST00000410093 GYS1P13807 737 aa15.86■□□□□ 0.13
LIMS1-205ENST00000410093 ANTXR2P58335 489 aa15.86■□□□□ 0.13
LIMS1-205ENST00000410093 CCT2P78371 535 aaKnown RBP15.86■□□□□ 0.13
LIMS1-205ENST00000410093 AKNAD1Q5T1N1 836 aa15.86■□□□□ 0.13
LIMS1-205ENST00000410093 MFSD6Q6ZSS7 791 aa15.86■□□□□ 0.13
LIMS1-205ENST00000410093 FBXO33Q7Z6M2 555 aa15.86■□□□□ 0.13
LIMS1-205ENST00000410093 DDX11Q96FC9 970 aa15.86■□□□□ 0.13
LIMS1-205ENST00000410093 ANAPC4Q9UJX5 808 aa15.86■□□□□ 0.13
LIMS1-205ENST00000410093 NAP1L2Q9ULW6 460 aaPredicted RBP15.86■□□□□ 0.13
LIMS1-205ENST00000410093 GSG1L2A8MUP6 293 aa15.85■□□□□ 0.13
LIMS1-205ENST00000410093 CTAGE5O15320 804 aa15.85■□□□□ 0.13
LIMS1-205ENST00000410093 SYNE3Q6ZMZ3 975 aa15.85■□□□□ 0.13
LIMS1-205ENST00000410093 NUP62CLQ9H1M0 184 aa15.85■□□□□ 0.13
LIMS1-205ENST00000410093 A0A0G2JLW4 131 aa15.84■□□□□ 0.13
LIMS1-205ENST00000410093 TDO2P48775 406 aa15.84■□□□□ 0.13
LIMS1-205ENST00000410093 MAP3K11Q16584 847 aa15.84■□□□□ 0.13
LIMS1-205ENST00000410093 WASF1Q92558 559 aa15.84■□□□□ 0.13
LIMS1-205ENST00000410093 C8orf76Q96K31 380 aa15.84■□□□□ 0.13
LIMS1-205ENST00000410093 NBPF3Q9H094 633 aa15.84■□□□□ 0.13
LIMS1-205ENST00000410093 HPS5Q9UPZ3 1129 aa15.84■□□□□ 0.13
LIMS1-205ENST00000410093 SLC4A4Q9Y6R1 1079 aa15.84■□□□□ 0.13
LIMS1-205ENST00000410093 STK36Q9NRP7 1315 aa15.84■□□□□ 0.13
LIMS1-205ENST00000410093 DUOX1Q9NRD9 1551 aa15.84■□□□□ 0.13
LIMS1-205ENST00000410093 CCDC196A0A1B0GTZ2 297 aa15.84■□□□□ 0.13
LIMS1-205ENST00000410093 ERICH2A1L162 156 aa15.84■□□□□ 0.13
LIMS1-205ENST00000410093 ESPNB1AK53 854 aa15.84■□□□□ 0.13
LIMS1-205ENST00000410093 CLCN1P35523 988 aa15.84■□□□□ 0.13
LIMS1-205ENST00000410093 METAP2P50579 478 aaKnown RBP eCLIP15.84■□□□□ 0.136e-8■■■■■ 30.3
LIMS1-205ENST00000410093 SPTY2D1Q68D10 685 aaPredicted RBP15.84■□□□□ 0.13
LIMS1-205ENST00000410093 RBM43Q6ZSC3 357 aaKnown RBP15.84■□□□□ 0.13
LIMS1-205ENST00000410093 CHST3Q7LGC8 479 aa15.84■□□□□ 0.13
LIMS1-205ENST00000410093 TBC1D10CQ8IV04 446 aa15.84■□□□□ 0.13
LIMS1-205ENST00000410093 FBXO18Q8NFZ0 1043 aa15.84■□□□□ 0.13
LIMS1-205ENST00000410093 IGDCC4Q8TDY8 1250 aa15.84■□□□□ 0.13
LIMS1-205ENST00000410093 BRIP1Q9BX63 1249 aa15.84■□□□□ 0.13
LIMS1-205ENST00000410093 ORC3Q9UBD5 711 aaPredicted RBP15.84■□□□□ 0.13
LIMS1-205ENST00000410093 SRP68Q9UHB9 627 aaKnown RBP15.84■□□□□ 0.13
LIMS1-205ENST00000410093 CACNA1SQ13698 1873 aa15.83■□□□□ 0.13
LIMS1-205ENST00000410093 MAGEB6P1A0A0J9YX57 407 aa15.83■□□□□ 0.12
LIMS1-205ENST00000410093 ZBTB43O43298 467 aa15.83■□□□□ 0.12
LIMS1-205ENST00000410093 CYP7A1P22680 504 aa15.83■□□□□ 0.12
LIMS1-205ENST00000410093 FUCA2Q9BTY2 467 aa15.83■□□□□ 0.12
LIMS1-205ENST00000410093 ARMT1Q9H993 441 aa15.83■□□□□ 0.12
LIMS1-205ENST00000410093 LEMD3Q9Y2U8 911 aa15.83■□□□□ 0.12
LIMS1-205ENST00000410093 UTRNP46939 3433 aa15.82■□□□□ 0.12
LIMS1-205ENST00000410093 FDPSP14324 419 aaKnown RBP15.82■□□□□ 0.12
LIMS1-205ENST00000410093 TMEM67Q5HYA8 995 aa15.82■□□□□ 0.12
LIMS1-205ENST00000410093 APOA5Q6Q788 366 aa15.82■□□□□ 0.12
LIMS1-205ENST00000410093 CERS3Q8IU89 383 aa15.82■□□□□ 0.12
LIMS1-205ENST00000410093 FAM84BQ96KN1 310 aaPredicted RBP15.82■□□□□ 0.12
LIMS1-205ENST00000410093 TNMDQ9H2S6 317 aa15.82■□□□□ 0.12
LIMS1-205ENST00000410093 NCOA5Q9HCD5 579 aaKnown RBP15.82■□□□□ 0.12
LIMS1-205ENST00000410093 EPB41L4AQ9HCS5 686 aaPredicted RBP15.82■□□□□ 0.12
LIMS1-205ENST00000410093 RTEL1Q9NZ71 1219 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms