RNA–Protein interactions for RNA: ENST00000409050.1

SCN1A-203, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 5,946 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-203ENST00000409050 FAM81BQ96LP2 452 aa6.83□□□□□ -1.32
SCN1A-203ENST00000409050 Q9H521 79 aa6.83□□□□□ -1.32
SCN1A-203ENST00000409050 SLC4A4Q9Y6R1 1079 aa6.83□□□□□ -1.32
SCN1A-203ENST00000409050 MAGEB6P1A0A0J9YX57 407 aa6.82□□□□□ -1.32
SCN1A-203ENST00000409050 PCP11498 1178 aaKnown RBP6.82□□□□□ -1.32
SCN1A-203ENST00000409050 CYP7A1P22680 504 aa6.82□□□□□ -1.32
SCN1A-203ENST00000409050 SMTNP53814 917 aa6.82□□□□□ -1.32
SCN1A-203ENST00000409050 GUCY1B3Q02153 619 aa6.82□□□□□ -1.32
SCN1A-203ENST00000409050 GALNT17Q6IS24 598 aa6.82□□□□□ -1.32
SCN1A-203ENST00000409050 PHLDB3Q6NSJ2 640 aa6.82□□□□□ -1.32
SCN1A-203ENST00000409050 C8orf74Q6P047 294 aa6.82□□□□□ -1.32
SCN1A-203ENST00000409050 CCDC62Q6P9F0 684 aa6.82□□□□□ -1.32
SCN1A-203ENST00000409050 KRT25Q7Z3Z0 450 aa6.82□□□□□ -1.32
SCN1A-203ENST00000409050 TMEM87AQ8NBN3 555 aa6.82□□□□□ -1.32
SCN1A-203ENST00000409050 GOLGA5Q8TBA6 731 aa6.82□□□□□ -1.32
SCN1A-203ENST00000409050 NOS1P29475 1434 aa6.82□□□□□ -1.32
SCN1A-203ENST00000409050 GOLGA8KD6RF30 607 aa6.82□□□□□ -1.32
SCN1A-203ENST00000409050 N4BP1O75113 896 aaKnown RBP6.82□□□□□ -1.32
SCN1A-203ENST00000409050 FLOT1O75955 427 aa6.82□□□□□ -1.32
SCN1A-203ENST00000409050 INPP5BP32019 993 aa6.82□□□□□ -1.32
SCN1A-203ENST00000409050 SLC9C1Q4G0N8 1177 aa6.82□□□□□ -1.32
SCN1A-203ENST00000409050 ZNF569Q5MCW4 686 aa6.82□□□□□ -1.32
SCN1A-203ENST00000409050 VPS52Q8N1B4 723 aa6.82□□□□□ -1.32
SCN1A-203ENST00000409050 LEO1Q8WVC0 666 aaPredicted RBP6.82□□□□□ -1.32
SCN1A-203ENST00000409050 MED4Q9NPJ6 270 aa6.82□□□□□ -1.32
SCN1A-203ENST00000409050 CETN3O15182 167 aa6.82□□□□□ -1.32
SCN1A-203ENST00000409050 MAN1A1P33908 653 aa6.82□□□□□ -1.32
SCN1A-203ENST00000409050 CCDC122Q5T0U0 273 aa6.82□□□□□ -1.32
SCN1A-203ENST00000409050 GPATCH11Q8N954 259 aa6.82□□□□□ -1.32
SCN1A-203ENST00000409050 SLC17A8Q8NDX2 589 aa6.82□□□□□ -1.32
SCN1A-203ENST00000409050 MIPOL1Q8TD10 442 aa6.82□□□□□ -1.32
SCN1A-203ENST00000409050 GRK7Q8WTQ7 553 aa6.82□□□□□ -1.32
SCN1A-203ENST00000409050 NLRP3Q96P20 1036 aa6.82□□□□□ -1.32
SCN1A-203ENST00000409050 SELENOSQ9BQE4 189 aa6.82□□□□□ -1.32
SCN1A-203ENST00000409050 DNAJC25Q9H1X3 360 aa6.82□□□□□ -1.32
SCN1A-203ENST00000409050 SAMM50Q9Y512 469 aa6.82□□□□□ -1.32
SCN1A-203ENST00000409050 CREB3L3Q68CJ9 461 aa6.82□□□□□ -1.32
SCN1A-203ENST00000409050 PAIP2Q9BPZ3 127 aaKnown RBP6.82□□□□□ -1.32
SCN1A-203ENST00000409050 MAK16Q9BXY0 300 aaKnown RBP6.82□□□□□ -1.32
SCN1A-203ENST00000409050 VPS18Q9P253 973 aa6.82□□□□□ -1.32
SCN1A-203ENST00000409050 MYO1AQ9UBC5 1043 aa6.82□□□□□ -1.32
SCN1A-203ENST00000409050 PPP1R1BQ9UD71 204 aaPredicted RBP6.82□□□□□ -1.32
SCN1A-203ENST00000409050 PUF60Q9UHX1 559 aaKnown RBP6.82□□□□□ -1.32
SCN1A-203ENST00000409050 CNPY2Q9Y2B0 182 aa6.82□□□□□ -1.32
SCN1A-203ENST00000409050 CDK13Q14004 1512 aaKnown RBP6.82□□□□□ -1.32
SCN1A-203ENST00000409050 EIF3CLB5ME19 914 aaKnown RBP6.82□□□□□ -1.32
SCN1A-203ENST00000409050 NLRP12P59046 1061 aa6.82□□□□□ -1.32
SCN1A-203ENST00000409050 CFAP221Q4G0U5 840 aa6.82□□□□□ -1.32
SCN1A-203ENST00000409050 HVCN1Q96D96 273 aa6.82□□□□□ -1.32
SCN1A-203ENST00000409050 CALR3Q96L12 384 aaKnown RBP6.82□□□□□ -1.32
SCN1A-203ENST00000409050 EIF3CQ99613 913 aaKnown RBP6.82□□□□□ -1.32
SCN1A-203ENST00000409050 PSDA5PKW4 1024 aaPredicted RBP6.81□□□□□ -1.32
SCN1A-203ENST00000409050 STMN1P16949 149 aa6.81□□□□□ -1.32
SCN1A-203ENST00000409050 TNNI2P48788 182 aa6.81□□□□□ -1.32
SCN1A-203ENST00000409050 CHMP4BP1P59074 171 aa6.81□□□□□ -1.32
SCN1A-203ENST00000409050 CCDC144CPQ8IYA2 1237 aa6.81□□□□□ -1.32
SCN1A-203ENST00000409050 CCT6BQ92526 530 aa6.81□□□□□ -1.32
SCN1A-203ENST00000409050 SUDS3Q9H7L9 328 aaPredicted RBP6.81□□□□□ -1.32
SCN1A-203ENST00000409050 FAM204AQ9H8W3 233 aa6.81□□□□□ -1.32
SCN1A-203ENST00000409050 MRVI1Q9Y6F6 885 aa6.81□□□□□ -1.32
SCN1A-203ENST00000409050 MAP3K5Q99683 1374 aa6.81□□□□□ -1.32
SCN1A-203ENST00000409050 PRAG1Q86YV5 1406 aa6.81□□□□□ -1.32
SCN1A-203ENST00000409050 URB2Q14146 1524 aaKnown RBP6.81□□□□□ -1.32
SCN1A-203ENST00000409050 PEG3Q9GZU2 1588 aa6.81□□□□□ -1.32
SCN1A-203ENST00000409050 BIVM-ERCC5R4GMW8 1640 aa6.81□□□□□ -1.32
SCN1A-203ENST00000409050 PTPDC1A2A3K4 754 aa6.81□□□□□ -1.32
SCN1A-203ENST00000409050 GOLGA6CA6NDK9 693 aa6.81□□□□□ -1.32
SCN1A-203ENST00000409050 GOLGA6BA6NDN3 693 aa6.81□□□□□ -1.32
SCN1A-203ENST00000409050 RNF40O75150 1001 aa6.81□□□□□ -1.32
SCN1A-203ENST00000409050 GOLGA6DP0CG33 693 aa6.81□□□□□ -1.32
SCN1A-203ENST00000409050 ZNF365Q70YC5 407 aa6.81□□□□□ -1.32
SCN1A-203ENST00000409050 NME9Q86XW9 330 aa6.81□□□□□ -1.32
SCN1A-203ENST00000409050 SMC1BQ8NDV3 1235 aa6.81□□□□□ -1.32
SCN1A-203ENST00000409050 SECISBP2LQ93073 1101 aaKnown RBP6.81□□□□□ -1.32
SCN1A-203ENST00000409050 NT5C3AQ9H0P0 336 aa6.81□□□□□ -1.32
SCN1A-203ENST00000409050 GOLGA6AQ9NYA3 693 aa6.81□□□□□ -1.32
SCN1A-203ENST00000409050 KDM3AQ9Y4C1 1321 aa6.81□□□□□ -1.32
SCN1A-203ENST00000409050 TNFAIP3P21580 790 aa6.81□□□□□ -1.32
SCN1A-203ENST00000409050 UBE3BQ7Z3V4 1068 aa6.81□□□□□ -1.32
SCN1A-203ENST00000409050 CCDC63Q8NA47 563 aa6.81□□□□□ -1.32
SCN1A-203ENST00000409050 ATP2A3Q93084 1043 aa6.81□□□□□ -1.32
SCN1A-203ENST00000409050 TUBB6Q9BUF5 446 aa6.81□□□□□ -1.32
SCN1A-203ENST00000409050 ZBTB40Q9NUA8 1239 aa6.81□□□□□ -1.32
SCN1A-203ENST00000409050 AMOTL2Q9Y2J4 779 aa6.81□□□□□ -1.32
SCN1A-203ENST00000409050 I3L4J1 428 aa6.81□□□□□ -1.32
SCN1A-203ENST00000409050 NDUFAB1O14561 156 aa6.81□□□□□ -1.32
SCN1A-203ENST00000409050 BCRP11274 1271 aa6.81□□□□□ -1.32
SCN1A-203ENST00000409050 HSP90AA5PQ58FG0 334 aa6.81□□□□□ -1.32
SCN1A-203ENST00000409050 RPUSD2Q8IZ73 545 aaKnown RBP6.81□□□□□ -1.32
SCN1A-203ENST00000409050 PRPF31Q8WWY3 499 aaKnown RBP6.81□□□□□ -1.32
SCN1A-203ENST00000409050 ZKSCAN3Q9BRR0 538 aa6.81□□□□□ -1.32
SCN1A-203ENST00000409050 USP26Q9BXU7 913 aa6.81□□□□□ -1.32
SCN1A-203ENST00000409050 HOMER3Q9NSC5 361 aa6.81□□□□□ -1.32
SCN1A-203ENST00000409050 TYW1Q9NV66 732 aaKnown RBP6.81□□□□□ -1.32
SCN1A-203ENST00000409050 TNRQ92752 1358 aa6.81□□□□□ -1.32
SCN1A-203ENST00000409050 UHRF1BP1LA0JNW5 1464 aa6.8□□□□□ -1.32
SCN1A-203ENST00000409050 CHMLP26374 656 aa6.8□□□□□ -1.32
SCN1A-203ENST00000409050 ASIC2Q16515 512 aa6.8□□□□□ -1.32
SCN1A-203ENST00000409050 C8orf34Q49A92 452 aa6.8□□□□□ -1.32
SCN1A-203ENST00000409050 PODNQ7Z5L7 613 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 132 ms