RNA–Protein interactions for RNA: ENST00000409047.2

TUBA3D-202, Transcript of tubulin alpha 3d, humanhuman

TSL 2

Gene TUBA3D, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3D-202ENST00000409047 MGAMO43451 1857 aa16.52■□□□□ 0.23
TUBA3D-202ENST00000409047 GNRH1P01148 92 aa16.51■□□□□ 0.23
TUBA3D-202ENST00000409047 METTL24Q5JXM2 366 aa16.51■□□□□ 0.23
TUBA3D-202ENST00000409047 HHIPL2Q6UWX4 724 aa16.51■□□□□ 0.23
TUBA3D-202ENST00000409047 MIGA2Q7L4E1 593 aa16.51■□□□□ 0.23
TUBA3D-202ENST00000409047 ZNF112Q9UJU3 913 aa16.51■□□□□ 0.23
TUBA3D-202ENST00000409047 KCNH4Q9UQ05 1017 aa16.51■□□□□ 0.23
TUBA3D-202ENST00000409047 KIF16BQ96L93 1317 aa16.5■□□□□ 0.23
TUBA3D-202ENST00000409047 PRMT2P55345 433 aa16.5■□□□□ 0.23
TUBA3D-202ENST00000409047 PPATQ06203 517 aa16.5■□□□□ 0.23
TUBA3D-202ENST00000409047 VPS37DQ86XT2 251 aa16.5■□□□□ 0.23
TUBA3D-202ENST00000409047 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.5■□□□□ 0.23
TUBA3D-202ENST00000409047 MRS2Q9HD23 443 aa16.5■□□□□ 0.23
TUBA3D-202ENST00000409047 SRRDQ9UH36 339 aa16.5■□□□□ 0.23
TUBA3D-202ENST00000409047 CPA4Q9UI42 421 aa16.5■□□□□ 0.23
TUBA3D-202ENST00000409047 SUGT1Q9Y2Z0 365 aa16.5■□□□□ 0.23
TUBA3D-202ENST00000409047 AK9Q5TCS8 1911 aa16.49■□□□□ 0.23
TUBA3D-202ENST00000409047 ECM2O94769 699 aaPredicted RBP16.49■□□□□ 0.23
TUBA3D-202ENST00000409047 OSBPP22059 807 aa16.49■□□□□ 0.23
TUBA3D-202ENST00000409047 KIF22Q14807 665 aa16.49■□□□□ 0.23
TUBA3D-202ENST00000409047 CAVIN4Q5BKX8 364 aa16.49■□□□□ 0.23
TUBA3D-202ENST00000409047 ANKRD23Q86SG2 305 aa16.49■□□□□ 0.23
TUBA3D-202ENST00000409047 ZNF341Q9BYN7 854 aa16.49■□□□□ 0.23
TUBA3D-202ENST00000409047 PRO3102Q9H379 93 aa16.49■□□□□ 0.23
TUBA3D-202ENST00000409047 PTPRFP10586 1907 aa16.49■□□□□ 0.23
TUBA3D-202ENST00000409047 PSMC4P43686 418 aa16.48■□□□□ 0.23
TUBA3D-202ENST00000409047 RFX5P48382 616 aaPredicted RBP16.48■□□□□ 0.23
TUBA3D-202ENST00000409047 NFIAQ12857 509 aa16.48■□□□□ 0.23
TUBA3D-202ENST00000409047 TMOD2Q9NZR1 351 aa16.48■□□□□ 0.23
TUBA3D-202ENST00000409047 DAGLAQ9Y4D2 1042 aa16.48■□□□□ 0.23
TUBA3D-202ENST00000409047 ATRNL1Q5VV63 1379 aa16.48■□□□□ 0.23
TUBA3D-202ENST00000409047 ZNF521Q96K83 1311 aa16.47■□□□□ 0.23
TUBA3D-202ENST00000409047 DOCK3Q8IZD9 2030 aa16.47■□□□□ 0.23
TUBA3D-202ENST00000409047 PDHXO00330 501 aa16.47■□□□□ 0.23
TUBA3D-202ENST00000409047 FRAT2O75474 233 aaPredicted RBP16.47■□□□□ 0.23
TUBA3D-202ENST00000409047 BCRP11274 1271 aa16.47■□□□□ 0.23
TUBA3D-202ENST00000409047 NOL9Q5SY16 702 aaKnown RBP16.47■□□□□ 0.23
TUBA3D-202ENST00000409047 DCAF15Q66K64 600 aa16.47■□□□□ 0.23
TUBA3D-202ENST00000409047 GPAT2Q6NUI2 795 aa16.47■□□□□ 0.23
TUBA3D-202ENST00000409047 CDC42EP5Q6NZY7 148 aa16.47■□□□□ 0.23
TUBA3D-202ENST00000409047 CHRDL2Q6WN34 429 aa16.47■□□□□ 0.23
TUBA3D-202ENST00000409047 FAM151AQ8WW52 585 aa16.47■□□□□ 0.23
TUBA3D-202ENST00000409047 USP44Q9H0E7 712 aa16.47■□□□□ 0.23
TUBA3D-202ENST00000409047 RBM27Q9P2N5 1060 aaKnown RBP16.47■□□□□ 0.23
TUBA3D-202ENST00000409047 FAM198AQ9UFP1 575 aa16.47■□□□□ 0.23
TUBA3D-202ENST00000409047 PHIPQ8WWQ0 1821 aa16.47■□□□□ 0.23
TUBA3D-202ENST00000409047 MAST3O60307 1309 aa16.46■□□□□ 0.23
TUBA3D-202ENST00000409047 GJA8P48165 433 aa16.46■□□□□ 0.23
TUBA3D-202ENST00000409047 PUM3Q15397 648 aaKnown RBP16.46■□□□□ 0.23
TUBA3D-202ENST00000409047 DIXDC1Q155Q3 683 aa16.46■□□□□ 0.23
TUBA3D-202ENST00000409047 ZFPM1Q8IX07 1006 aa16.46■□□□□ 0.23
TUBA3D-202ENST00000409047 MRPL50Q8N5N7 158 aaKnown RBP16.46■□□□□ 0.23
TUBA3D-202ENST00000409047 HOOK2Q96ED9 719 aa16.46■□□□□ 0.23
TUBA3D-202ENST00000409047 A0A0C4DFX4 3053 aa16.46■□□□□ 0.23
TUBA3D-202ENST00000409047 DOCK2Q92608 1830 aa16.45■□□□□ 0.22
TUBA3D-202ENST00000409047 WDHD1O75717 1129 aaPredicted RBP16.45■□□□□ 0.22
TUBA3D-202ENST00000409047 PRDX5P30044 214 aa16.45■□□□□ 0.22
TUBA3D-202ENST00000409047 GRK4P32298 578 aa16.45■□□□□ 0.22
TUBA3D-202ENST00000409047 TCP10Q12799 353 aa16.45■□□□□ 0.22
TUBA3D-202ENST00000409047 ATG9AQ7Z3C6 839 aa16.45■□□□□ 0.22
TUBA3D-202ENST00000409047 MYPNQ86TC9 1320 aa16.45■□□□□ 0.22
TUBA3D-202ENST00000409047 PHF20L1A8MW92 1017 aa16.44■□□□□ 0.22
TUBA3D-202ENST00000409047 GJB1P08034 283 aa16.44■□□□□ 0.22
TUBA3D-202ENST00000409047 CCL5P13501 91 aa16.44■□□□□ 0.22
TUBA3D-202ENST00000409047 PRKCZQ05513 592 aa16.44■□□□□ 0.22
TUBA3D-202ENST00000409047 ALPK3Q96L96 1907 aa16.44■□□□□ 0.22
TUBA3D-202ENST00000409047 MYH2Q9UKX2 1941 aa16.44■□□□□ 0.22
TUBA3D-202ENST00000409047 RFX7Q2KHR2 1363 aa16.43■□□□□ 0.22
TUBA3D-202ENST00000409047 EYA2O00167 538 aa16.43■□□□□ 0.22
TUBA3D-202ENST00000409047 IFIT1P09914 478 aaKnown RBP16.43■□□□□ 0.22
TUBA3D-202ENST00000409047 CYP2C8P10632 490 aa16.43■□□□□ 0.22
TUBA3D-202ENST00000409047 WDR66Q8TBY9 1149 aa16.43■□□□□ 0.22
TUBA3D-202ENST00000409047 GABRQQ9UN88 632 aa16.43■□□□□ 0.22
TUBA3D-202ENST00000409047 FMNL1O95466 1100 aaPredicted RBP16.42■□□□□ 0.22
TUBA3D-202ENST00000409047 SLURP2P0DP57 97 aa16.42■□□□□ 0.22
TUBA3D-202ENST00000409047 RAET1EQ8TD07 263 aa16.42■□□□□ 0.22
TUBA3D-202ENST00000409047 LPIN2Q92539 896 aa16.42■□□□□ 0.22
TUBA3D-202ENST00000409047 CXCL11O14625 94 aa16.41■□□□□ 0.22
TUBA3D-202ENST00000409047 HOXD10P28358 340 aa16.41■□□□□ 0.22
TUBA3D-202ENST00000409047 MAP3K10Q02779 954 aa16.41■□□□□ 0.22
TUBA3D-202ENST00000409047 SH3BP5LQ7L8J4 393 aa16.41■□□□□ 0.22
TUBA3D-202ENST00000409047 NKX2-3Q8TAU0 364 aa16.41■□□□□ 0.22
TUBA3D-202ENST00000409047 DPF3Q92784 378 aa16.41■□□□□ 0.22
TUBA3D-202ENST00000409047 RNF208Q9H0X6 261 aa16.41■□□□□ 0.22
TUBA3D-202ENST00000409047 UNC93B1Q9H1C4 597 aa16.41■□□□□ 0.22
TUBA3D-202ENST00000409047 PTPRCP08575 1304 aa16.41■□□□□ 0.22
TUBA3D-202ENST00000409047 DOCK1Q14185 1865 aa16.4■□□□□ 0.22
TUBA3D-202ENST00000409047 A0A0G2JLL6 359 aaPredicted RBP16.4■□□□□ 0.22
TUBA3D-202ENST00000409047 SLC5A1P13866 664 aa16.4■□□□□ 0.22
TUBA3D-202ENST00000409047 PRRT2Q7Z6L0 340 aaPredicted RBP16.4■□□□□ 0.22
TUBA3D-202ENST00000409047 U2AF1L4Q8WU68 220 aaKnown RBP16.4■□□□□ 0.22
TUBA3D-202ENST00000409047 SSH1Q8WYL5 1049 aa16.4■□□□□ 0.22
TUBA3D-202ENST00000409047 PARK7Q99497 189 aaKnown RBP16.4■□□□□ 0.22
TUBA3D-202ENST00000409047 USP40Q9NVE5 1235 aa16.4■□□□□ 0.22
TUBA3D-202ENST00000409047 SALL1Q9NSC2 1324 aa16.4■□□□□ 0.22
TUBA3D-202ENST00000409047 ZBTB7BO15156 539 aaPredicted RBP16.39■□□□□ 0.21
TUBA3D-202ENST00000409047 ZBTB22O15209 634 aa16.39■□□□□ 0.21
TUBA3D-202ENST00000409047 PTPRAP18433 802 aa16.39■□□□□ 0.21
TUBA3D-202ENST00000409047 IDI2Q9BXS1 227 aa16.39■□□□□ 0.21
TUBA3D-202ENST00000409047 AFG3L2Q9Y4W6 797 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms