RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 FTSJ3Q8IY81 847 aaKnown RBP19.03■□□□□ 0.64
TPM1-207ENST00000403994 OPTNQ96CV9 577 aa19.03■□□□□ 0.64
TPM1-207ENST00000403994 R3HDMLQ9H3Y0 253 aa19.03■□□□□ 0.64
TPM1-207ENST00000403994 AKAP2Q9Y2D5 859 aa19.03■□□□□ 0.64
TPM1-207ENST00000403994 RFX7Q2KHR2 1363 aa19.03■□□□□ 0.64
TPM1-207ENST00000403994 GPR25O00155 361 aa19.02■□□□□ 0.64
TPM1-207ENST00000403994 ALDH1A1P00352 501 aa19.02■□□□□ 0.64
TPM1-207ENST00000403994 RLBP1P12271 317 aa19.02■□□□□ 0.64
TPM1-207ENST00000403994 MVPQ14764 893 aaKnown RBP19.02■□□□□ 0.64
TPM1-207ENST00000403994 XAGE2Q96GT9 111 aa19.02■□□□□ 0.64
TPM1-207ENST00000403994 INHBEP58166 350 aa19.01■□□□□ 0.63
TPM1-207ENST00000403994 CDC42EP5Q6NZY7 148 aa19.01■□□□□ 0.63
TPM1-207ENST00000403994 ZGPATQ8N5A5 531 aaKnown RBP19.01■□□□□ 0.63
TPM1-207ENST00000403994 CNKSR2Q8WXI2 1034 aa19.01■□□□□ 0.63
TPM1-207ENST00000403994 CSADQ9Y600 493 aa19.01■□□□□ 0.63
TPM1-207ENST00000403994 GAKO14976 1311 aa19■□□□□ 0.63
TPM1-207ENST00000403994 MAP3K9P80192 1104 aa19■□□□□ 0.63
TPM1-207ENST00000403994 NFIAQ12857 509 aa19■□□□□ 0.63
TPM1-207ENST00000403994 POLA2Q14181 598 aa19■□□□□ 0.63
TPM1-207ENST00000403994 ITPRIPQ8IWB1 547 aa19■□□□□ 0.63
TPM1-207ENST00000403994 WRNIP1Q96S55 665 aa19■□□□□ 0.63
TPM1-207ENST00000403994 SNCAIPQ9Y6H5 919 aa19■□□□□ 0.63
TPM1-207ENST00000403994 DZIP1Q86YF9 867 aaKnown RBP18.99■□□□□ 0.63
TPM1-207ENST00000403994 HOOK2Q96ED9 719 aa18.99■□□□□ 0.63
TPM1-207ENST00000403994 C1orf115Q9H7X2 142 aa18.99■□□□□ 0.63
TPM1-207ENST00000403994 TESPA1A2RU30 521 aaPredicted RBP18.98■□□□□ 0.63
TPM1-207ENST00000403994 FKTNO75072 461 aa18.98■□□□□ 0.63
TPM1-207ENST00000403994 G3BP1Q13283 466 aaKnown RBP eCLIP18.98■□□□□ 0.63
TPM1-207ENST00000403994 DCAF15Q66K64 600 aa18.98■□□□□ 0.63
TPM1-207ENST00000403994 PI16Q6UXB8 463 aa18.98■□□□□ 0.63
TPM1-207ENST00000403994 FAM151AQ8WW52 585 aa18.98■□□□□ 0.63
TPM1-207ENST00000403994 OTUD5Q96G74 571 aa18.98■□□□□ 0.63
TPM1-207ENST00000403994 MS4A4AQ96JQ5 239 aa18.98■□□□□ 0.63
TPM1-207ENST00000403994 NEUROD6Q96NK8 337 aa18.98■□□□□ 0.63
TPM1-207ENST00000403994 PTPN18Q99952 460 aa18.98■□□□□ 0.63
TPM1-207ENST00000403994 FAM198AQ9UFP1 575 aa18.98■□□□□ 0.63
TPM1-207ENST00000403994 ATRNL1Q5VV63 1379 aa18.97■□□□□ 0.63
TPM1-207ENST00000403994 SPDYE5A6NIY4 337 aa18.97■□□□□ 0.63
TPM1-207ENST00000403994 ARID4AP29374 1257 aaPredicted RBP18.97■□□□□ 0.63
TPM1-207ENST00000403994 TCP10Q12799 353 aa18.97■□□□□ 0.63
TPM1-207ENST00000403994 SSH3Q8TE77 659 aa18.97■□□□□ 0.63
TPM1-207ENST00000403994 ABCF2Q9UG63 623 aa18.97■□□□□ 0.63
TPM1-207ENST00000403994 CRHR2Q13324 411 aa18.96■□□□□ 0.63
TPM1-207ENST00000403994 BRI3BPQ8WY22 251 aa18.96■□□□□ 0.63
TPM1-207ENST00000403994 ZKSCAN4Q969J2 545 aaPredicted RBP18.96■□□□□ 0.63
TPM1-207ENST00000403994 ZNF341Q9BYN7 854 aa18.96■□□□□ 0.63
TPM1-207ENST00000403994 USP40Q9NVE5 1235 aa18.96■□□□□ 0.63
TPM1-207ENST00000403994 HMG20BQ9P0W2 317 aa18.96■□□□□ 0.63
TPM1-207ENST00000403994 DOCK1Q14185 1865 aa18.96■□□□□ 0.63
TPM1-207ENST00000403994 MROH7-TTC4A0A0A0MT08 1334 aa18.96■□□□□ 0.63
TPM1-207ENST00000403994 MYO5AQ9Y4I1 1855 aaKnown RBP18.95■□□□□ 0.62
TPM1-207ENST00000403994 CCL15-CCL14A0A0B4J2E2 113 aa18.95■□□□□ 0.62
TPM1-207ENST00000403994 GTF2A2P52657 109 aa18.95■□□□□ 0.62
TPM1-207ENST00000403994 PKN2Q16513 984 aaKnown RBP18.95■□□□□ 0.62
TPM1-207ENST00000403994 CCL15Q16663 113 aa18.95■□□□□ 0.62
TPM1-207ENST00000403994 GORABQ5T7V8 394 aa18.95■□□□□ 0.62
TPM1-207ENST00000403994 SPTY2D1Q68D10 685 aaPredicted RBP18.95■□□□□ 0.62
TPM1-207ENST00000403994 OTUD7BQ6GQQ9 843 aa18.95■□□□□ 0.62
TPM1-207ENST00000403994 MIGA2Q7L4E1 593 aa18.95■□□□□ 0.62
TPM1-207ENST00000403994 SPATA5Q8NB90 893 aa18.95■□□□□ 0.62
TPM1-207ENST00000403994 ZNF384Q8TF68 577 aa18.95■□□□□ 0.62
TPM1-207ENST00000403994 HPS5Q9UPZ3 1129 aa18.95■□□□□ 0.62
TPM1-207ENST00000403994 BRCA2P51587 3418 aa18.94■□□□□ 0.62
TPM1-207ENST00000403994 ZBTB7BO15156 539 aaPredicted RBP18.94■□□□□ 0.62
TPM1-207ENST00000403994 INPP5BP32019 993 aa18.94■□□□□ 0.62
TPM1-207ENST00000403994 MCAMP43121 646 aa18.94■□□□□ 0.62
TPM1-207ENST00000403994 RGS19P49795 217 aa18.94■□□□□ 0.62
TPM1-207ENST00000403994 RGS3P49796 1198 aa18.94■□□□□ 0.62
TPM1-207ENST00000403994 ATP8B2P98198 1209 aa18.94■□□□□ 0.62
TPM1-207ENST00000403994 MECOMQ03112 1051 aa18.94■□□□□ 0.62
TPM1-207ENST00000403994 ERO1BQ86YB8 467 aa18.94■□□□□ 0.62
TPM1-207ENST00000403994 SLF2Q8IX21 1173 aa18.94■□□□□ 0.62
TPM1-207ENST00000403994 IDI2Q9BXS1 227 aa18.94■□□□□ 0.62
TPM1-207ENST00000403994 CDK5RAP2Q96SN8 1893 aa18.94■□□□□ 0.62
TPM1-207ENST00000403994 FOCADQ5VW36 1801 aa18.93■□□□□ 0.62
TPM1-207ENST00000403994 BTDP43251 543 aa18.93■□□□□ 0.62
TPM1-207ENST00000403994 PPIL2Q13356 520 aa18.93■□□□□ 0.62
TPM1-207ENST00000403994 OS9Q13438 667 aaPredicted RBP18.93■□□□□ 0.62
TPM1-207ENST00000403994 TNNI3KQ59H18 835 aa18.93■□□□□ 0.62
TPM1-207ENST00000403994 ERICH6Q7L0X2 663 aa18.93■□□□□ 0.62
TPM1-207ENST00000403994 ZFPM1Q8IX07 1006 aa18.93■□□□□ 0.62
TPM1-207ENST00000403994 FAM163AQ96GL9 167 aaPredicted RBP18.93■□□□□ 0.62
TPM1-207ENST00000403994 GPR108Q9NPR9 543 aa18.93■□□□□ 0.62
TPM1-207ENST00000403994 FPGT-TNNI3KV9GXZ4 949 aa18.93■□□□□ 0.62
TPM1-207ENST00000403994 ZSWIM8A7E2V4 1837 aa18.93■□□□□ 0.62
TPM1-207ENST00000403994 PTPRFP10586 1907 aa18.92■□□□□ 0.62
TPM1-207ENST00000403994 IRF6O14896 467 aa18.92■□□□□ 0.62
TPM1-207ENST00000403994 ENTPD3O75355 529 aa18.92■□□□□ 0.62
TPM1-207ENST00000403994 WDHD1O75717 1129 aaPredicted RBP18.92■□□□□ 0.62
TPM1-207ENST00000403994 FBXO46Q6PJ61 603 aaPredicted RBP18.92■□□□□ 0.62
TPM1-207ENST00000403994 FAM43AQ8N2R8 423 aa18.92■□□□□ 0.62
TPM1-207ENST00000403994 PANK1Q8TE04 598 aa18.92■□□□□ 0.62
TPM1-207ENST00000403994 DDX4Q9NQI0 724 aaKnown RBP18.92■□□□□ 0.62
TPM1-207ENST00000403994 ZNF112Q9UJU3 913 aa18.92■□□□□ 0.62
TPM1-207ENST00000403994 PHIPQ8WWQ0 1821 aa18.91■□□□□ 0.62
TPM1-207ENST00000403994 SURF6O75683 361 aaKnown RBP18.91■□□□□ 0.62
TPM1-207ENST00000403994 UQCRFS1P1P0C7P4 283 aa18.91■□□□□ 0.62
TPM1-207ENST00000403994 SOX10P56693 466 aa18.91■□□□□ 0.62
TPM1-207ENST00000403994 CEP85Q6P2H3 762 aa18.91■□□□□ 0.62
TPM1-207ENST00000403994 TBC1D9Q6ZT07 1266 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms