RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 TNNI2P48788 182 aa15.11■□□□□ 0.01
SPTLC1P3-201ENST00000403408 KIF22Q14807 665 aa15.11■□□□□ 0.01
SPTLC1P3-201ENST00000403408 LRRC24Q50LG9 513 aa15.11■□□□□ 0.01
SPTLC1P3-201ENST00000403408 ZDHHC15Q96MV8 337 aa15.11■□□□□ 0.01
SPTLC1P3-201ENST00000403408 SPINK5Q9NQ38 1064 aaPredicted RBP15.11■□□□□ 0.01
SPTLC1P3-201ENST00000403408 GABRQQ9UN88 632 aa15.11■□□□□ 0.01
SPTLC1P3-201ENST00000403408 MGAMO43451 1857 aa15.11■□□□□ 0.01
SPTLC1P3-201ENST00000403408 PDHXO00330 501 aa15.1■□□□□ 0.01
SPTLC1P3-201ENST00000403408 DLL1O00548 723 aa15.1■□□□□ 0.01
SPTLC1P3-201ENST00000403408 GNRH1P01148 92 aa15.1■□□□□ 0.01
SPTLC1P3-201ENST00000403408 PRMT2P55345 433 aa15.1■□□□□ 0.01
SPTLC1P3-201ENST00000403408 HDLBPQ00341 1268 aaKnown RBP15.1■□□□□ 0.01
SPTLC1P3-201ENST00000403408 PRKCZQ05513 592 aa15.1■□□□□ 0.01
SPTLC1P3-201ENST00000403408 TAF7LQ5H9L4 462 aa15.1■□□□□ 0.01
SPTLC1P3-201ENST00000403408 GPAT2Q6NUI2 795 aa15.1■□□□□ 0.01
SPTLC1P3-201ENST00000403408 FAM83AQ86UY5 434 aa15.1■□□□□ 0.01
SPTLC1P3-201ENST00000403408 VGLL2Q8N8G2 317 aa15.1■□□□□ 0.01
SPTLC1P3-201ENST00000403408 LRCH3Q96II8 777 aa15.1■□□□□ 0.01
SPTLC1P3-201ENST00000403408 UNC93B1Q9H1C4 597 aa15.1■□□□□ 0.01
SPTLC1P3-201ENST00000403408 ZNF112Q9UJU3 913 aa15.1■□□□□ 0.01
SPTLC1P3-201ENST00000403408 KCNH4Q9UQ05 1017 aa15.1■□□□□ 0.01
SPTLC1P3-201ENST00000403408 IL16Q14005 1332 aa15.1■□□□□ 0.01
SPTLC1P3-201ENST00000403408 SPTBN5Q9NRC6 3674 aaKnown RBP15.1■□□□□ 0.01
SPTLC1P3-201ENST00000403408 BCRP11274 1271 aa15.09■□□□□ 0.01
SPTLC1P3-201ENST00000403408 BCAMP50895 628 aa15.09■□□□□ 0.01
SPTLC1P3-201ENST00000403408 PPATQ06203 517 aa15.09■□□□□ 0.01
SPTLC1P3-201ENST00000403408 EXOSC9Q06265 439 aaKnown RBP15.09■□□□□ 0.01
SPTLC1P3-201ENST00000403408 NCBP3Q53F19 620 aaKnown RBP15.09■□□□□ 0.01
SPTLC1P3-201ENST00000403408 ANKRD23Q86SG2 305 aa15.09■□□□□ 0.01
SPTLC1P3-201ENST00000403408 DNAH12Q6ZR08 3092 aa15.09■□□□□ 0.01
SPTLC1P3-201ENST00000403408 MYPNQ86TC9 1320 aa15.09■□□□□ 0.01
SPTLC1P3-201ENST00000403408 SLURP2P0DP57 97 aa15.08■□□□□ 0
SPTLC1P3-201ENST00000403408 CYP2C8P10632 490 aa15.08■□□□□ 0
SPTLC1P3-201ENST00000403408 NFIAQ12857 509 aa15.08■□□□□ 0
SPTLC1P3-201ENST00000403408 FKBP1CQ5VVH2 108 aa15.08■□□□□ 0
SPTLC1P3-201ENST00000403408 SLC17A8Q8NDX2 589 aa15.08■□□□□ 0
SPTLC1P3-201ENST00000403408 RAET1EQ8TD07 263 aa15.08■□□□□ 0
SPTLC1P3-201ENST00000403408 TEKT1Q969V4 418 aa15.08■□□□□ 0
SPTLC1P3-201ENST00000403408 MRIQ9BWK5 157 aa15.08■□□□□ 0
SPTLC1P3-201ENST00000403408 RNF208Q9H0X6 261 aa15.08■□□□□ 0
SPTLC1P3-201ENST00000403408 EYSQ5T1H1 3165 aa15.08■□□□□ 0
SPTLC1P3-201ENST00000403408 RPAP1Q9BWH6 1393 aaPredicted RBP15.08■□□□□ 0
SPTLC1P3-201ENST00000403408 FMNL1O95466 1100 aaPredicted RBP15.07■□□□□ 0
SPTLC1P3-201ENST00000403408 NBPF7P0C2Y1 421 aaPredicted RBP15.07■□□□□ 0
SPTLC1P3-201ENST00000403408 ZFPM1Q8IX07 1006 aa15.07■□□□□ 0
SPTLC1P3-201ENST00000403408 ANKRD44Q8N8A2 993 aa15.07■□□□□ 0
SPTLC1P3-201ENST00000403408 U2AF1L4Q8WU68 220 aaKnown RBP15.07■□□□□ 0
SPTLC1P3-201ENST00000403408 ZNF341Q9BYN7 854 aa15.07■□□□□ 0
SPTLC1P3-201ENST00000403408 AK9Q5TCS8 1911 aa15.06■□□□□ 0
SPTLC1P3-201ENST00000403408 FARP2O94887 1054 aaPredicted RBP15.06■□□□□ 0
SPTLC1P3-201ENST00000403408 KLHDC4Q8TBB5 520 aa15.06■□□□□ 0
SPTLC1P3-201ENST00000403408 STAP2Q9UGK3 403 aa15.06■□□□□ 0
SPTLC1P3-201ENST00000403408 PRUNE2Q8WUY3 3088 aa15.06■□□□□ 0
SPTLC1P3-201ENST00000403408 ELNP15502 786 aa15.05■□□□□ -0
SPTLC1P3-201ENST00000403408 FGFR2P21802 821 aa15.05■□□□□ -0
SPTLC1P3-201ENST00000403408 RABL6Q3YEC7 729 aaPredicted RBP15.05■□□□□ -0
SPTLC1P3-201ENST00000403408 HHIPL2Q6UWX4 724 aa15.05■□□□□ -0
SPTLC1P3-201ENST00000403408 NKX2-3Q8TAU0 364 aa15.05■□□□□ -0
SPTLC1P3-201ENST00000403408 TBC1D22AQ8WUA7 517 aa15.05■□□□□ -0
SPTLC1P3-201ENST00000403408 BICC1Q9H694 974 aaKnown RBP15.05■□□□□ -0
SPTLC1P3-201ENST00000403408 FAM198AQ9UFP1 575 aa15.05■□□□□ -0
SPTLC1P3-201ENST00000403408 MROH5Q6ZUA9 1318 aa15.05■□□□□ -0
SPTLC1P3-201ENST00000403408 ATRNL1Q5VV63 1379 aa15.05■□□□□ -0
SPTLC1P3-201ENST00000403408 PTPRFP10586 1907 aa15.05■□□□□ -0
SPTLC1P3-201ENST00000403408 UTYO14607 1347 aa15.04■□□□□ -0
SPTLC1P3-201ENST00000403408 WDHD1O75717 1129 aaPredicted RBP15.04■□□□□ -0
SPTLC1P3-201ENST00000403408 SGPL1O95470 568 aa15.04■□□□□ -0
SPTLC1P3-201ENST00000403408 TCP10Q12799 353 aa15.04■□□□□ -0
SPTLC1P3-201ENST00000403408 DIXDC1Q155Q3 683 aa15.04■□□□□ -0
SPTLC1P3-201ENST00000403408 NOL9Q5SY16 702 aaKnown RBP15.04■□□□□ -0
SPTLC1P3-201ENST00000403408 CDC42EP5Q6NZY7 148 aa15.04■□□□□ -0
SPTLC1P3-201ENST00000403408 FAM151AQ8WW52 585 aa15.04■□□□□ -0
SPTLC1P3-201ENST00000403408 HTATIP2Q9BUP3 242 aa15.04■□□□□ -0
SPTLC1P3-201ENST00000403408 C9orf78Q9NZ63 289 aaPredicted RBP15.04■□□□□ -0
SPTLC1P3-201ENST00000403408 DAGLAQ9Y4D2 1042 aa15.04■□□□□ -0
SPTLC1P3-201ENST00000403408 PHF20L1A8MW92 1017 aa15.03■□□□□ -0
SPTLC1P3-201ENST00000403408 ALDH1L1O75891 902 aa15.03■□□□□ -0
SPTLC1P3-201ENST00000403408 PDE8BO95263 885 aa15.03■□□□□ -0
SPTLC1P3-201ENST00000403408 HOXD10P28358 340 aa15.03■□□□□ -0
SPTLC1P3-201ENST00000403408 METTL24Q5JXM2 366 aa15.03■□□□□ -0
SPTLC1P3-201ENST00000403408 DCAF15Q66K64 600 aa15.03■□□□□ -0
SPTLC1P3-201ENST00000403408 VPS37DQ86XT2 251 aa15.03■□□□□ -0
SPTLC1P3-201ENST00000403408 DIS3LQ8TF46 1054 aaKnown RBP15.03■□□□□ -0
SPTLC1P3-201ENST00000403408 BIN2Q9UBW5 565 aaPredicted RBP15.03■□□□□ -0
SPTLC1P3-201ENST00000403408 SALL2Q9Y467 1007 aaPredicted RBP15.03■□□□□ -0
SPTLC1P3-201ENST00000403408 PHIPQ8WWQ0 1821 aa15.03■□□□□ -0
SPTLC1P3-201ENST00000403408 ADCY3O60266 1144 aa15.02■□□□□ -0
SPTLC1P3-201ENST00000403408 INHAP05111 366 aa15.02■□□□□ -0
SPTLC1P3-201ENST00000403408 FLT3LGP49771 235 aa15.02■□□□□ -0
SPTLC1P3-201ENST00000403408 SLC4A10Q6U841 1118 aa15.02■□□□□ -0
SPTLC1P3-201ENST00000403408 SH3BP5LQ7L8J4 393 aa15.02■□□□□ -0
SPTLC1P3-201ENST00000403408 SLAIN1Q8ND83 568 aa15.02■□□□□ -0
SPTLC1P3-201ENST00000403408 TMOD2Q9NZR1 351 aa15.02■□□□□ -0
SPTLC1P3-201ENST00000403408 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.02■□□□□ -0
SPTLC1P3-201ENST00000403408 NR2E3Q9Y5X4 410 aa15.02■□□□□ -0
SPTLC1P3-201ENST00000403408 FRAT2O75474 233 aaPredicted RBP15.01□□□□□ -0.01
SPTLC1P3-201ENST00000403408 FCGRTP55899 365 aa15.01□□□□□ -0.01
SPTLC1P3-201ENST00000403408 DEFB118Q96PH6 123 aa15.01□□□□□ -0.01
SPTLC1P3-201ENST00000403408 SRCIN1Q9C0H9 1055 aa15.01□□□□□ -0.01
SPTLC1P3-201ENST00000403408 CRISPLD2Q9H0B8 497 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms