RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 CEBPAP49715 358 aaPredicted RBP6.23□□□□□ -1.41
PTPRD-205ENST00000397611 Q6ZUG5 572 aa6.23□□□□□ -1.41
PTPRD-205ENST00000397611 CCAR1Q8IX12 1150 aaKnown RBP6.23□□□□□ -1.41
PTPRD-205ENST00000397611 MB21D2Q8IYB1 491 aaPredicted RBP6.23□□□□□ -1.41
PTPRD-205ENST00000397611 CNNM2Q9H8M5 875 aa6.23□□□□□ -1.41
PTPRD-205ENST00000397611 KDM6AO15550 1401 aaPredicted RBP6.23□□□□□ -1.41
PTPRD-205ENST00000397611 PXDNQ92626 1479 aa6.23□□□□□ -1.41
PTPRD-205ENST00000397611 KDM3BQ7LBC6 1761 aa6.23□□□□□ -1.41
PTPRD-205ENST00000397611 POTEB2H3BUK9 544 aa6.23□□□□□ -1.41
PTPRD-205ENST00000397611 STX10O60499 249 aa6.23□□□□□ -1.41
PTPRD-205ENST00000397611 EPHA10Q5JZY3 1008 aa6.23□□□□□ -1.41
PTPRD-205ENST00000397611 CCDC51Q96ER9 411 aa6.23□□□□□ -1.41
PTPRD-205ENST00000397611 RNF216Q9NWF9 866 aaPredicted RBP6.23□□□□□ -1.41
PTPRD-205ENST00000397611 ANGEL1Q9UNK9 670 aaKnown RBP6.23□□□□□ -1.41
PTPRD-205ENST00000397611 ATRNO75882 1429 aa6.23□□□□□ -1.41
PTPRD-205ENST00000397611 LMO7Q8WWI1 1683 aa6.23□□□□□ -1.41
PTPRD-205ENST00000397611 CUTAO60888 179 aa6.23□□□□□ -1.41
PTPRD-205ENST00000397611 PHACTR2O75167 634 aa6.23□□□□□ -1.41
PTPRD-205ENST00000397611 ATP2C2O75185 946 aa6.23□□□□□ -1.41
PTPRD-205ENST00000397611 CSF1RP07333 972 aa6.23□□□□□ -1.41
PTPRD-205ENST00000397611 IFIT1P09914 478 aaKnown RBP6.23□□□□□ -1.41
PTPRD-205ENST00000397611 KRT28Q7Z3Y7 464 aa6.23□□□□□ -1.41
PTPRD-205ENST00000397611 ORC3Q9UBD5 711 aaPredicted RBP6.23□□□□□ -1.41
PTPRD-205ENST00000397611 CPA1P15085 419 aa6.23□□□□□ -1.41
PTPRD-205ENST00000397611 CCDC91Q7Z6B0 441 aa6.23□□□□□ -1.41
PTPRD-205ENST00000397611 ZNF589Q86UQ0 364 aaPredicted RBP6.23□□□□□ -1.41
PTPRD-205ENST00000397611 PRDM4Q9UKN5 801 aa6.23□□□□□ -1.41
PTPRD-205ENST00000397611 PCDH11XQ9BZA7 1347 aa6.23□□□□□ -1.41
PTPRD-205ENST00000397611 PCDH11YQ9BZA8 1340 aa6.23□□□□□ -1.41
PTPRD-205ENST00000397611 CHD2O14647 1828 aaKnown RBP6.23□□□□□ -1.41
PTPRD-205ENST00000397611 SPEF2Q9C093 1822 aa6.23□□□□□ -1.41
PTPRD-205ENST00000397611 CYP27B1O15528 508 aa6.23□□□□□ -1.41
PTPRD-205ENST00000397611 CCDC102BQ68D86 513 aa6.23□□□□□ -1.41
PTPRD-205ENST00000397611 IQCEQ6IPM2 695 aa6.23□□□□□ -1.41
PTPRD-205ENST00000397611 TAX1BP1Q86VP1 789 aa6.23□□□□□ -1.41
PTPRD-205ENST00000397611 PCDHA7Q9UN72 937 aa6.23□□□□□ -1.41
PTPRD-205ENST00000397611 E7EWF7 191 aa6.23□□□□□ -1.41
PTPRD-205ENST00000397611 ANXA1P04083 346 aa6.23□□□□□ -1.41
PTPRD-205ENST00000397611 H2AFXP16104 143 aaPredicted RBP6.23□□□□□ -1.41
PTPRD-205ENST00000397611 ANO1Q5XXA6 986 aa6.23□□□□□ -1.41
PTPRD-205ENST00000397611 ATG9AQ7Z3C6 839 aa6.23□□□□□ -1.41
PTPRD-205ENST00000397611 ENOX1Q8TC92 643 aaKnown RBP6.23□□□□□ -1.41
PTPRD-205ENST00000397611 AP5Z1O43299 807 aa6.22□□□□□ -1.41
PTPRD-205ENST00000397611 KIF23Q02241 960 aaPredicted RBP6.22□□□□□ -1.41
PTPRD-205ENST00000397611 TCIRG1Q13488 830 aa6.22□□□□□ -1.41
PTPRD-205ENST00000397611 MICALCLQ6ZW33 695 aa6.22□□□□□ -1.41
PTPRD-205ENST00000397611 GBP2P32456 591 aaPredicted RBP6.22□□□□□ -1.41
PTPRD-205ENST00000397611 MEX3CQ5U5Q3 659 aaKnown RBP6.22□□□□□ -1.41
PTPRD-205ENST00000397611 ARFGAP3Q9NP61 516 aa6.22□□□□□ -1.41
PTPRD-205ENST00000397611 MYO1AQ9UBC5 1043 aa6.22□□□□□ -1.41
PTPRD-205ENST00000397611 USP16Q9Y5T5 823 aa6.22□□□□□ -1.41
PTPRD-205ENST00000397611 NR1I2O75469 434 aa6.22□□□□□ -1.41
PTPRD-205ENST00000397611 GNAT2P19087 354 aa6.22□□□□□ -1.41
PTPRD-205ENST00000397611 CCZ1BP86790 482 aa6.22□□□□□ -1.41
PTPRD-205ENST00000397611 CCZ1P86791 482 aaPredicted RBP6.22□□□□□ -1.41
PTPRD-205ENST00000397611 SCRN1Q12765 414 aa6.22□□□□□ -1.41
PTPRD-205ENST00000397611 GIGYF2Q6Y7W6 1299 aaKnown RBP6.22□□□□□ -1.41
PTPRD-205ENST00000397611 NAA15Q9BXJ9 866 aaKnown RBP6.22□□□□□ -1.41
PTPRD-205ENST00000397611 RNF41Q9H4P4 317 aaPredicted RBP6.22□□□□□ -1.41
PTPRD-205ENST00000397611 MAGEC2Q9UBF1 373 aaPredicted RBP6.22□□□□□ -1.41
PTPRD-205ENST00000397611 RTL9Q8NET4 1388 aa6.22□□□□□ -1.41
PTPRD-205ENST00000397611 IQCDQ96DY2 449 aa6.22□□□□□ -1.41
PTPRD-205ENST00000397611 ZNHIT6Q9NWK9 470 aaKnown RBP6.22□□□□□ -1.41
PTPRD-205ENST00000397611 NEDD4P46934 1319 aa6.22□□□□□ -1.41
PTPRD-205ENST00000397611 CCDC151A5D8V7 595 aa6.22□□□□□ -1.41
PTPRD-205ENST00000397611 GUCY1B3Q02153 619 aa6.22□□□□□ -1.41
PTPRD-205ENST00000397611 AIMP1Q12904 312 aaKnown RBP6.22□□□□□ -1.41
PTPRD-205ENST00000397611 MAP9Q49MG5 647 aa6.22□□□□□ -1.41
PTPRD-205ENST00000397611 TNS2Q63HR2 1409 aa6.22□□□□□ -1.41
PTPRD-205ENST00000397611 NLRP12P59046 1061 aa6.22□□□□□ -1.41
PTPRD-205ENST00000397611 STOX1Q6ZVD7 989 aa6.22□□□□□ -1.41
PTPRD-205ENST00000397611 PROSER2Q86WR7 435 aaPredicted RBP6.22□□□□□ -1.41
PTPRD-205ENST00000397611 NUTM2AQ8IVF1 878 aaPredicted RBP6.22□□□□□ -1.41
PTPRD-205ENST00000397611 NEK11Q8NG66 645 aa6.22□□□□□ -1.41
PTPRD-205ENST00000397611 FDPSP14324 419 aaKnown RBP6.21□□□□□ -1.41
PTPRD-205ENST00000397611 TFCP2Q12800 502 aa6.21□□□□□ -1.41
PTPRD-205ENST00000397611 ISM2Q6H9L7 571 aa6.21□□□□□ -1.41
PTPRD-205ENST00000397611 NBPF11Q86T75 865 aa6.21□□□□□ -1.41
PTPRD-205ENST00000397611 MYD88Q99836 296 aa6.21□□□□□ -1.41
PTPRD-205ENST00000397611 ZNF215Q9UL58 517 aaPredicted RBP6.21□□□□□ -1.41
PTPRD-205ENST00000397611 PPFIA3O75145 1194 aa6.21□□□□□ -1.41
PTPRD-205ENST00000397611 FAM173BQ6P4H8 233 aa6.21□□□□□ -1.41
PTPRD-205ENST00000397611 DYDC1Q8WWB3 177 aa6.21□□□□□ -1.41
PTPRD-205ENST00000397611 JAK2O60674 1132 aa6.21□□□□□ -1.42
PTPRD-205ENST00000397611 CSB-PGBD3P0DP91 1061 aa6.21□□□□□ -1.42
PTPRD-205ENST00000397611 NCAPHQ15003 741 aa6.21□□□□□ -1.42
PTPRD-205ENST00000397611 SART3Q15020 963 aaKnown RBP6.21□□□□□ -1.42
PTPRD-205ENST00000397611 ATP2B3Q16720 1220 aa6.21□□□□□ -1.42
PTPRD-205ENST00000397611 KIAA1328Q86T90 577 aa6.21□□□□□ -1.42
PTPRD-205ENST00000397611 TRIM22Q8IYM9 498 aa6.21□□□□□ -1.42
PTPRD-205ENST00000397611 AOPEPQ8N6M6 819 aa6.21□□□□□ -1.42
PTPRD-205ENST00000397611 EFCAB8A8MWE9 144 aa6.21□□□□□ -1.42
PTPRD-205ENST00000397611 NT5DC1Q5TFE4 455 aa6.21□□□□□ -1.42
PTPRD-205ENST00000397611 FAM53CQ9NYF3 392 aa6.21□□□□□ -1.42
PTPRD-205ENST00000397611 KIF1AQ12756 1690 aa6.21□□□□□ -1.42
PTPRD-205ENST00000397611 TRAPPC10P48553 1259 aa6.21□□□□□ -1.42
PTPRD-205ENST00000397611 SLC20A2Q08357 652 aa6.21□□□□□ -1.42
PTPRD-205ENST00000397611 CCDC57Q2TAC2 916 aa6.21□□□□□ -1.42
PTPRD-205ENST00000397611 CEP57Q86XR8 500 aa6.21□□□□□ -1.42
PTPRD-205ENST00000397611 RABGGTAQ92696 567 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms