RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 HOOK2Q96ED9 719 aa17.86■□□□□ 0.45
SEC13-208ENST00000397109 FAM163AQ96GL9 167 aaPredicted RBP17.86■□□□□ 0.45
SEC13-208ENST00000397109 ZNF512BQ96KM6 892 aaPredicted RBP17.86■□□□□ 0.45
SEC13-208ENST00000397109 TEPSINQ96N21 525 aa17.86■□□□□ 0.45
SEC13-208ENST00000397109 TMEM39BQ9GZU3 492 aa17.86■□□□□ 0.45
SEC13-208ENST00000397109 EXOC6BQ9Y2D4 811 aa17.86■□□□□ 0.45
SEC13-208ENST00000397109 MCAMP43121 646 aa17.85■□□□□ 0.45
SEC13-208ENST00000397109 LBX1P52954 281 aa17.85■□□□□ 0.45
SEC13-208ENST00000397109 CACNB3P54284 484 aa17.85■□□□□ 0.45
SEC13-208ENST00000397109 SLC10A4Q96EP9 437 aa17.85■□□□□ 0.45
SEC13-208ENST00000397109 MYH2Q9UKX2 1941 aa17.85■□□□□ 0.45
SEC13-208ENST00000397109 SSC5DA1L4H1 1573 aa17.84■□□□□ 0.45
SEC13-208ENST00000397109 GAKO14976 1311 aa17.84■□□□□ 0.45
SEC13-208ENST00000397109 USP2O75604 605 aaPredicted RBP17.84■□□□□ 0.45
SEC13-208ENST00000397109 LDHCP07864 332 aa17.84■□□□□ 0.45
SEC13-208ENST00000397109 GSTO1P78417 241 aa17.84■□□□□ 0.45
SEC13-208ENST00000397109 CDC42EP5Q6NZY7 148 aa17.84■□□□□ 0.45
SEC13-208ENST00000397109 USP40Q9NVE5 1235 aa17.84■□□□□ 0.45
SEC13-208ENST00000397109 PPP4R2Q9NY27 417 aa17.84■□□□□ 0.45
SEC13-208ENST00000397109 IGSF3O75054 1194 aa17.83■□□□□ 0.45
SEC13-208ENST00000397109 RAB11FIP3O75154 756 aa17.83■□□□□ 0.45
SEC13-208ENST00000397109 SIRT2Q8IXJ6 389 aa17.83■□□□□ 0.45
SEC13-208ENST00000397109 ANKRD13AQ8IZ07 590 aa17.83■□□□□ 0.45
SEC13-208ENST00000397109 FAM151AQ8WW52 585 aa17.83■□□□□ 0.45
SEC13-208ENST00000397109 EAF2Q96CJ1 260 aaPredicted RBP17.83■□□□□ 0.45
SEC13-208ENST00000397109 KIF1BPQ96EK5 621 aa17.83■□□□□ 0.45
SEC13-208ENST00000397109 CSRNP1Q96S65 589 aa17.83■□□□□ 0.45
SEC13-208ENST00000397109 DBNLQ9UJU6 430 aaKnown RBP17.83■□□□□ 0.45
SEC13-208ENST00000397109 RPAP1Q9BWH6 1393 aaPredicted RBP17.83■□□□□ 0.44
SEC13-208ENST00000397109 MECOMQ03112 1051 aa17.82■□□□□ 0.44
SEC13-208ENST00000397109 PI16Q6UXB8 463 aa17.82■□□□□ 0.44
SEC13-208ENST00000397109 RHPN1Q8TCX5 695 aa17.82■□□□□ 0.44
SEC13-208ENST00000397109 CCDC8Q9H0W5 538 aaPredicted RBP17.82■□□□□ 0.44
SEC13-208ENST00000397109 SAGE1Q9NXZ1 904 aa17.82■□□□□ 0.44
SEC13-208ENST00000397109 LRP2BPQ9P2M1 347 aa17.82■□□□□ 0.44
SEC13-208ENST00000397109 FZD1Q9UP38 647 aa17.82■□□□□ 0.44
SEC13-208ENST00000397109 AKAP11Q9UKA4 1901 aa17.82■□□□□ 0.44
SEC13-208ENST00000397109 MROH7-TTC4A0A0A0MT08 1334 aa17.82■□□□□ 0.44
SEC13-208ENST00000397109 SPRYD7Q5W111 196 aa17.82■□□□□ 0.44
SEC13-208ENST00000397109 TBC1D9Q6ZT07 1266 aa17.82■□□□□ 0.44
SEC13-208ENST00000397109 AACSQ86V21 672 aa17.82■□□□□ 0.44
SEC13-208ENST00000397109 CLASRPQ8N2M8 674 aaKnown RBP17.82■□□□□ 0.44
SEC13-208ENST00000397109 RAI14Q9P0K7 980 aa17.82■□□□□ 0.44
SEC13-208ENST00000397109 MAP4K4O95819 1239 aaPredicted RBP17.81■□□□□ 0.44
SEC13-208ENST00000397109 SREBF2Q12772 1141 aa17.81■□□□□ 0.44
SEC13-208ENST00000397109 DCAF15Q66K64 600 aa17.81■□□□□ 0.44
SEC13-208ENST00000397109 CDAN1Q8IWY9 1227 aa17.81■□□□□ 0.44
SEC13-208ENST00000397109 NSUN4Q96CB9 384 aaKnown RBP17.81■□□□□ 0.44
SEC13-208ENST00000397109 GPR75-ASB3A0A0A6YYF3 556 aa17.8■□□□□ 0.44
SEC13-208ENST00000397109 ZBTB48P10074 688 aaPredicted RBP17.8■□□□□ 0.44
SEC13-208ENST00000397109 MAP3K9P80192 1104 aa17.8■□□□□ 0.44
SEC13-208ENST00000397109 TNS4Q8IZW8 715 aa17.8■□□□□ 0.44
SEC13-208ENST00000397109 CLMNQ96JQ2 1002 aa17.8■□□□□ 0.44
SEC13-208ENST00000397109 IDI2Q9BXS1 227 aa17.8■□□□□ 0.44
SEC13-208ENST00000397109 SNRKQ9NRH2 765 aa17.8■□□□□ 0.44
SEC13-208ENST00000397109 TLR7Q9NYK1 1049 aaKnown RBP17.8■□□□□ 0.44
SEC13-208ENST00000397109 ENTPD3O75355 529 aa17.79■□□□□ 0.44
SEC13-208ENST00000397109 BTDP43251 543 aa17.79■□□□□ 0.44
SEC13-208ENST00000397109 TM4SF4P48230 202 aa17.79■□□□□ 0.44
SEC13-208ENST00000397109 INHBEP58166 350 aa17.79■□□□□ 0.44
SEC13-208ENST00000397109 TCP10Q12799 353 aa17.79■□□□□ 0.44
SEC13-208ENST00000397109 IL1RAPL2Q9NP60 686 aa17.79■□□□□ 0.44
SEC13-208ENST00000397109 RNF186Q9NXI6 227 aa17.79■□□□□ 0.44
SEC13-208ENST00000397109 FAM198AQ9UFP1 575 aa17.79■□□□□ 0.44
SEC13-208ENST00000397109 AK9Q5TCS8 1911 aa17.79■□□□□ 0.44
SEC13-208ENST00000397109 MANSC4A6NHS7 340 aaPredicted RBP17.78■□□□□ 0.44
SEC13-208ENST00000397109 TRPA1O75762 1119 aa17.78■□□□□ 0.44
SEC13-208ENST00000397109 CYP2E1P05181 493 aaPredicted RBP17.78■□□□□ 0.44
SEC13-208ENST00000397109 ZAP70P43403 619 aa17.78■□□□□ 0.44
SEC13-208ENST00000397109 NFIAQ12857 509 aa17.78■□□□□ 0.44
SEC13-208ENST00000397109 MKRN3Q13064 507 aaKnown RBP17.78■□□□□ 0.44
SEC13-208ENST00000397109 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.78■□□□□ 0.442e-11■□□□□ 8.9
SEC13-208ENST00000397109 ZNF384Q8TF68 577 aa17.78■□□□□ 0.44
SEC13-208ENST00000397109 WNK4Q96J92 1243 aa17.78■□□□□ 0.44
SEC13-208ENST00000397109 NOL10Q9BSC4 688 aaKnown RBP17.78■□□□□ 0.44
SEC13-208ENST00000397109 TSKSQ9UJT2 592 aa17.78■□□□□ 0.44
SEC13-208ENST00000397109 CSADQ9Y600 493 aa17.78■□□□□ 0.44
SEC13-208ENST00000397109 APBB1O00213 710 aa17.77■□□□□ 0.44
SEC13-208ENST00000397109 IFIT2P09913 472 aaKnown RBP17.77■□□□□ 0.44
SEC13-208ENST00000397109 ZNF341Q9BYN7 854 aa17.77■□□□□ 0.44
SEC13-208ENST00000397109 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.77■□□□□ 0.44
SEC13-208ENST00000397109 NPM3O75607 178 aaKnown RBP17.76■□□□□ 0.43
SEC13-208ENST00000397109 RGS3P49796 1198 aa17.76■□□□□ 0.43
SEC13-208ENST00000397109 IFFO2Q5TF58 517 aa17.76■□□□□ 0.43
SEC13-208ENST00000397109 NAA16Q6N069 864 aaPredicted RBP17.76■□□□□ 0.43
SEC13-208ENST00000397109 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.76■□□□□ 0.43
SEC13-208ENST00000397109 WDHD1O75717 1129 aaPredicted RBP17.75■□□□□ 0.43
SEC13-208ENST00000397109 BAG3O95817 575 aa17.75■□□□□ 0.43
SEC13-208ENST00000397109 RHBDL3P58872 404 aa17.75■□□□□ 0.43
SEC13-208ENST00000397109 TMED8Q6PL24 325 aaPredicted RBP17.75■□□□□ 0.43
SEC13-208ENST00000397109 WRNIP1Q96S55 665 aa17.75■□□□□ 0.43
SEC13-208ENST00000397109 ELP3Q9H9T3 547 aa17.75■□□□□ 0.43
SEC13-208ENST00000397109 ALDH1A1P00352 501 aa17.75■□□□□ 0.43
SEC13-208ENST00000397109 PLCG2P16885 1265 aa17.75■□□□□ 0.43
SEC13-208ENST00000397109 AAMPQ13685 434 aa17.75■□□□□ 0.43
SEC13-208ENST00000397109 VGLL4Q14135 290 aa17.75■□□□□ 0.43
SEC13-208ENST00000397109 OPTNQ96CV9 577 aa17.75■□□□□ 0.43
SEC13-208ENST00000397109 RFX7Q2KHR2 1363 aa17.75■□□□□ 0.43
SEC13-208ENST00000397109 MIGA2Q7L4E1 593 aa17.74■□□□□ 0.43
SEC13-208ENST00000397109 ZSCAN29Q8IWY8 852 aaPredicted RBP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms