RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 TCP10L2B9ZVM9 353 aa17.14■□□□□ 0.33
SEC13-204ENST00000397099 MAP4K4O95819 1239 aaPredicted RBP17.14■□□□□ 0.33
SEC13-204ENST00000397099 ZBTB48P10074 688 aaPredicted RBP17.14■□□□□ 0.33
SEC13-204ENST00000397099 ARID4AP29374 1257 aaPredicted RBP17.14■□□□□ 0.33
SEC13-204ENST00000397099 PRDX5P30044 214 aa17.14■□□□□ 0.33
SEC13-204ENST00000397099 NBPF12Q5TAG4 269 aaPredicted RBP17.14■□□□□ 0.33
SEC13-204ENST00000397099 DZIP1Q86YF9 867 aaKnown RBP17.14■□□□□ 0.33
SEC13-204ENST00000397099 LAMB1P07942 1786 aa17.13■□□□□ 0.33
SEC13-204ENST00000397099 TBC1D8O95759 1140 aa17.13■□□□□ 0.33
SEC13-204ENST00000397099 LDHCP07864 332 aa17.13■□□□□ 0.33
SEC13-204ENST00000397099 TM4SF4P48230 202 aa17.13■□□□□ 0.33
SEC13-204ENST00000397099 GSTO1P78417 241 aa17.13■□□□□ 0.33
SEC13-204ENST00000397099 TNNI3KQ59H18 835 aa17.13■□□□□ 0.33
SEC13-204ENST00000397099 SPRYD7Q5W111 196 aa17.13■□□□□ 0.33
SEC13-204ENST00000397099 ERICH6Q7L0X2 663 aa17.13■□□□□ 0.33
SEC13-204ENST00000397099 SPATA5Q8NB90 893 aa17.13■□□□□ 0.33
SEC13-204ENST00000397099 ZNF512BQ96KM6 892 aaPredicted RBP17.13■□□□□ 0.33
SEC13-204ENST00000397099 C1orf115Q9H7X2 142 aa17.13■□□□□ 0.33
SEC13-204ENST00000397099 ABCF2Q9UG63 623 aa17.13■□□□□ 0.33
SEC13-204ENST00000397099 FPGT-TNNI3KV9GXZ4 949 aa17.13■□□□□ 0.33
SEC13-204ENST00000397099 SSC5DA1L4H1 1573 aa17.13■□□□□ 0.33
SEC13-204ENST00000397099 DCAF15Q66K64 600 aa17.12■□□□□ 0.33
SEC13-204ENST00000397099 FAM151AQ8WW52 585 aa17.12■□□□□ 0.33
SEC13-204ENST00000397099 CLMNQ96JQ2 1002 aa17.12■□□□□ 0.33
SEC13-204ENST00000397099 TEPSINQ96N21 525 aa17.12■□□□□ 0.33
SEC13-204ENST00000397099 ZBTB40Q9NUA8 1239 aa17.12■□□□□ 0.33
SEC13-204ENST00000397099 DAGLAQ9Y4D2 1042 aa17.12■□□□□ 0.33
SEC13-204ENST00000397099 MANSC4A6NHS7 340 aaPredicted RBP17.11■□□□□ 0.33
SEC13-204ENST00000397099 USP2O75604 605 aaPredicted RBP17.11■□□□□ 0.33
SEC13-204ENST00000397099 ALDH1A1P00352 501 aa17.11■□□□□ 0.33
SEC13-204ENST00000397099 TMED8Q6PL24 325 aaPredicted RBP17.11■□□□□ 0.33
SEC13-204ENST00000397099 TMEM39BQ9GZU3 492 aa17.11■□□□□ 0.33
SEC13-204ENST00000397099 GAKO14976 1311 aa17.11■□□□□ 0.33
SEC13-204ENST00000397099 AK9Q5TCS8 1911 aa17.1■□□□□ 0.33
SEC13-204ENST00000397099 DIXDC1Q155Q3 683 aa17.1■□□□□ 0.33
SEC13-204ENST00000397099 TTC39AQ5SRH9 613 aa17.1■□□□□ 0.33
SEC13-204ENST00000397099 CDC42EP5Q6NZY7 148 aa17.1■□□□□ 0.33
SEC13-204ENST00000397099 HMG20BQ9P0W2 317 aa17.1■□□□□ 0.33
SEC13-204ENST00000397099 COG6Q9Y2V7 657 aa17.1■□□□□ 0.33
SEC13-204ENST00000397099 CSADQ9Y600 493 aa17.1■□□□□ 0.33
SEC13-204ENST00000397099 NOM1Q5C9Z4 860 aaKnown RBP17.09■□□□□ 0.33
SEC13-204ENST00000397099 OTUD7BQ6GQQ9 843 aa17.09■□□□□ 0.33
SEC13-204ENST00000397099 CTU1Q7Z7A3 348 aaKnown RBP17.09■□□□□ 0.33
SEC13-204ENST00000397099 WNK4Q96J92 1243 aa17.09■□□□□ 0.33
SEC13-204ENST00000397099 IDI2Q9BXS1 227 aa17.09■□□□□ 0.33
SEC13-204ENST00000397099 USP40Q9NVE5 1235 aa17.09■□□□□ 0.33
SEC13-204ENST00000397099 MROH7-TTC4A0A0A0MT08 1334 aa17.08■□□□□ 0.32
SEC13-204ENST00000397099 RAB11FIP3O75154 756 aa17.08■□□□□ 0.32
SEC13-204ENST00000397099 ENTPD3O75355 529 aa17.08■□□□□ 0.32
SEC13-204ENST00000397099 NPM3O75607 178 aaKnown RBP17.08■□□□□ 0.32
SEC13-204ENST00000397099 CACNB3P54284 484 aa17.08■□□□□ 0.32
SEC13-204ENST00000397099 MAP3K9P80192 1104 aa17.08■□□□□ 0.32
SEC13-204ENST00000397099 ZNF296Q8WUU4 475 aaPredicted RBP17.08■□□□□ 0.32
SEC13-204ENST00000397099 CFHR5Q9BXR6 569 aa17.08■□□□□ 0.32
SEC13-204ENST00000397099 LRP2BPQ9P2M1 347 aa17.08■□□□□ 0.32
SEC13-204ENST00000397099 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.08■□□□□ 0.32
SEC13-204ENST00000397099 OTOFQ9HC10 1997 aa17.08■□□□□ 0.32
SEC13-204ENST00000397099 MCAMP43121 646 aa17.07■□□□□ 0.32
SEC13-204ENST00000397099 MECOMQ03112 1051 aa17.07■□□□□ 0.32
SEC13-204ENST00000397099 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.07■□□□□ 0.32
SEC13-204ENST00000397099 KIF1BPQ96EK5 621 aa17.07■□□□□ 0.32
SEC13-204ENST00000397099 NOL10Q9BSC4 688 aaKnown RBP17.07■□□□□ 0.32
SEC13-204ENST00000397099 GPR75-ASB3A0A0A6YYF3 556 aa17.06■□□□□ 0.32
SEC13-204ENST00000397099 GPR25O00155 361 aa17.06■□□□□ 0.32
SEC13-204ENST00000397099 CERS3Q8IU89 383 aa17.06■□□□□ 0.32
SEC13-204ENST00000397099 CDAN1Q8IWY9 1227 aa17.06■□□□□ 0.32
SEC13-204ENST00000397099 CLASRPQ8N2M8 674 aaKnown RBP17.06■□□□□ 0.32
SEC13-204ENST00000397099 NSUN4Q96CB9 384 aaKnown RBP17.06■□□□□ 0.32
SEC13-204ENST00000397099 DBNDD2Q9BQY9 259 aa17.06■□□□□ 0.32
SEC13-204ENST00000397099 ZNF341Q9BYN7 854 aa17.06■□□□□ 0.32
SEC13-204ENST00000397099 ELP3Q9H9T3 547 aa17.06■□□□□ 0.32
SEC13-204ENST00000397099 RAI14Q9P0K7 980 aa17.06■□□□□ 0.32
SEC13-204ENST00000397099 MAST2Q6P0Q8 1798 aa17.06■□□□□ 0.32
SEC13-204ENST00000397099 BAG3O95817 575 aa17.05■□□□□ 0.32
SEC13-204ENST00000397099 PLCG2P16885 1265 aa17.05■□□□□ 0.32
SEC13-204ENST00000397099 MLLT1Q03111 559 aaPredicted RBP17.05■□□□□ 0.32
SEC13-204ENST00000397099 IFNL1Q8IU54 200 aa17.05■□□□□ 0.32
SEC13-204ENST00000397099 DBNLQ9UJU6 430 aaKnown RBP17.05■□□□□ 0.32
SEC13-204ENST00000397099 EXOC6BQ9Y2D4 811 aa17.05■□□□□ 0.32
SEC13-204ENST00000397099 FKTNO75072 461 aa17.04■□□□□ 0.32
SEC13-204ENST00000397099 BTDP43251 543 aa17.04■□□□□ 0.32
SEC13-204ENST00000397099 GTF2A2P52657 109 aa17.04■□□□□ 0.32
SEC13-204ENST00000397099 VGLL4Q14135 290 aa17.04■□□□□ 0.32
SEC13-204ENST00000397099 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.04■□□□□ 0.32
SEC13-204ENST00000397099 ERO1BQ86YB8 467 aa17.04■□□□□ 0.32
SEC13-204ENST00000397099 RHPN1Q8TCX5 695 aa17.04■□□□□ 0.32
SEC13-204ENST00000397099 EAF2Q96CJ1 260 aaPredicted RBP17.04■□□□□ 0.32
SEC13-204ENST00000397099 OPTNQ96CV9 577 aa17.04■□□□□ 0.32
SEC13-204ENST00000397099 WRNIP1Q96S55 665 aa17.04■□□□□ 0.32
SEC13-204ENST00000397099 FAM198AQ9UFP1 575 aa17.04■□□□□ 0.32
SEC13-204ENST00000397099 DOCK2Q92608 1830 aa17.03■□□□□ 0.32
SEC13-204ENST00000397099 TESPA1A2RU30 521 aaPredicted RBP17.03■□□□□ 0.32
SEC13-204ENST00000397099 GJA5P36382 358 aa17.03■□□□□ 0.32
SEC13-204ENST00000397099 RGS3P49796 1198 aa17.03■□□□□ 0.32
SEC13-204ENST00000397099 TCP10Q12799 353 aa17.03■□□□□ 0.32
SEC13-204ENST00000397099 PKN2Q16513 984 aaKnown RBP17.03■□□□□ 0.32
SEC13-204ENST00000397099 AACSQ86V21 672 aa17.03■□□□□ 0.32
SEC13-204ENST00000397099 CCDC8Q9H0W5 538 aaPredicted RBP17.03■□□□□ 0.32
SEC13-204ENST00000397099 R3HDMLQ9H3Y0 253 aa17.03■□□□□ 0.32
SEC13-204ENST00000397099 COL2A1P02458 1487 aaPredicted RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms