RNA–Protein interactions for RNA: ENST00000396410.8

PDXDC1-202, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDXDC1, Length 4,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-202ENST00000396410 ERCC4Q92889 916 aaPredicted RBP13.39□□□□□ -0.27
PDXDC1-202ENST00000396410 CCDC34Q96HJ3 373 aa13.39□□□□□ -0.27
PDXDC1-202ENST00000396410 SETDB2Q96T68 719 aa13.39□□□□□ -0.27
PDXDC1-202ENST00000396410 GJB4Q9NTQ9 266 aa13.39□□□□□ -0.27
PDXDC1-202ENST00000396410 SPATA31A1Q5TZJ5 1347 aa13.39□□□□□ -0.27
PDXDC1-202ENST00000396410 KRT40Q6A162 431 aa13.39□□□□□ -0.27
PDXDC1-202ENST00000396410 ADALQ6DHV7 355 aa13.39□□□□□ -0.27
PDXDC1-202ENST00000396410 SH2B2O14492 632 aaPredicted RBP13.39□□□□□ -0.27
PDXDC1-202ENST00000396410 TOM1O60784 492 aa13.39□□□□□ -0.27
PDXDC1-202ENST00000396410 GYG1P46976 350 aa13.39□□□□□ -0.27
PDXDC1-202ENST00000396410 KCNQ4P56696 695 aa13.39□□□□□ -0.27
PDXDC1-202ENST00000396410 ANTXR2P58335 489 aa13.39□□□□□ -0.27
PDXDC1-202ENST00000396410 APOA5Q6Q788 366 aa13.39□□□□□ -0.27
PDXDC1-202ENST00000396410 CYB5R4Q7L1T6 521 aa13.39□□□□□ -0.27
PDXDC1-202ENST00000396410 PIBF1Q8WXW3 757 aa13.39□□□□□ -0.27
PDXDC1-202ENST00000396410 NLRP3Q96P20 1036 aa13.39□□□□□ -0.27
PDXDC1-202ENST00000396410 FUCA2Q9BTY2 467 aa13.39□□□□□ -0.27
PDXDC1-202ENST00000396410 RTEL1Q9NZ71 1219 aa13.39□□□□□ -0.27
PDXDC1-202ENST00000396410 PRKAB2O43741 272 aa13.38□□□□□ -0.27
PDXDC1-202ENST00000396410 ARID3AQ99856 593 aa13.38□□□□□ -0.27
PDXDC1-202ENST00000396410 RIC1Q4ADV7 1423 aa13.38□□□□□ -0.27
PDXDC1-202ENST00000396410 INTS5Q6P9B9 1019 aaKnown RBP13.38□□□□□ -0.27
PDXDC1-202ENST00000396410 OLFM4Q6UX06 510 aa13.38□□□□□ -0.27
PDXDC1-202ENST00000396410 TMTC2Q8N394 836 aa13.38□□□□□ -0.27
PDXDC1-202ENST00000396410 MARCH10Q8NA82 808 aaPredicted RBP13.38□□□□□ -0.27
PDXDC1-202ENST00000396410 ESR2Q92731 530 aa13.38□□□□□ -0.27
PDXDC1-202ENST00000396410 INCENPQ9NQS7 918 aa13.38□□□□□ -0.27
PDXDC1-202ENST00000396410 YEATS4O95619 227 aa13.38□□□□□ -0.27
PDXDC1-202ENST00000396410 FDPSP14324 419 aaKnown RBP13.38□□□□□ -0.27
PDXDC1-202ENST00000396410 ISM2Q6H9L7 571 aa13.38□□□□□ -0.27
PDXDC1-202ENST00000396410 LCORLQ8N3X6 602 aa13.38□□□□□ -0.27
PDXDC1-202ENST00000396410 AOPEPQ8N6M6 819 aa13.38□□□□□ -0.27
PDXDC1-202ENST00000396410 KCNQ2O43526 872 aa13.37□□□□□ -0.27
PDXDC1-202ENST00000396410 CAMTA2O94983 1202 aa13.37□□□□□ -0.27
PDXDC1-202ENST00000396410 SYKP43405 635 aa13.37□□□□□ -0.27
PDXDC1-202ENST00000396410 TPD52L1Q16890 204 aaPredicted RBP13.37□□□□□ -0.27
PDXDC1-202ENST00000396410 ERFEQ4G0M1 354 aa13.37□□□□□ -0.27
PDXDC1-202ENST00000396410 IQCA1Q86XH1 822 aa13.37□□□□□ -0.27
PDXDC1-202ENST00000396410 NOL10Q9BSC4 688 aaKnown RBP13.37□□□□□ -0.27
PDXDC1-202ENST00000396410 NEDD4P46934 1319 aa13.37□□□□□ -0.27
PDXDC1-202ENST00000396410 WDR19Q8NEZ3 1342 aa13.37□□□□□ -0.27
PDXDC1-202ENST00000396410 ZNF75DP51815 510 aa13.37□□□□□ -0.27
PDXDC1-202ENST00000396410 ITPK1Q13572 414 aa13.37□□□□□ -0.27
PDXDC1-202ENST00000396410 MEX3CQ5U5Q3 659 aaKnown RBP13.37□□□□□ -0.27
PDXDC1-202ENST00000396410 ZNF592Q92610 1267 aa13.37□□□□□ -0.27
PDXDC1-202ENST00000396410 BRMS1Q9HCU9 246 aa13.37□□□□□ -0.27
PDXDC1-202ENST00000396410 AMOTL1Q8IY63 956 aa13.37□□□□□ -0.27
PDXDC1-202ENST00000396410 VGLL2Q8N8G2 317 aa13.37□□□□□ -0.27
PDXDC1-202ENST00000396410 LINC00301Q8NCQ3 95 aa13.37□□□□□ -0.27
PDXDC1-202ENST00000396410 AIFM3Q96NN9 605 aa13.37□□□□□ -0.27
PDXDC1-202ENST00000396410 GOLPH3LQ9H4A5 285 aa13.37□□□□□ -0.27
PDXDC1-202ENST00000396410 NYXQ9GZU5 481 aa13.36□□□□□ -0.27
PDXDC1-202ENST00000396410 ZSWIM5Q9P217 1185 aa13.36□□□□□ -0.27
PDXDC1-202ENST00000396410 KIF23Q02241 960 aaPredicted RBP13.36□□□□□ -0.27
PDXDC1-202ENST00000396410 SDR42E1Q8WUS8 393 aa13.36□□□□□ -0.27
PDXDC1-202ENST00000396410 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.36□□□□□ -0.27
PDXDC1-202ENST00000396410 DENND2AQ9ULE3 1009 aa13.36□□□□□ -0.27
PDXDC1-202ENST00000396410 NDUFA8P51970 172 aa13.36□□□□□ -0.27
PDXDC1-202ENST00000396410 CCDC24Q8N4L8 307 aa13.36□□□□□ -0.27
PDXDC1-202ENST00000396410 POLR3EQ9NVU0 708 aa13.36□□□□□ -0.27
PDXDC1-202ENST00000396410 GNPATO15228 680 aa13.36□□□□□ -0.27
PDXDC1-202ENST00000396410 CATIPQ7Z7H3 387 aa13.36□□□□□ -0.27
PDXDC1-202ENST00000396410 SMTNL1A8MU46 457 aa13.35□□□□□ -0.27
PDXDC1-202ENST00000396410 PPARAQ07869 468 aa13.35□□□□□ -0.27
PDXDC1-202ENST00000396410 ANKIB1Q9P2G1 1089 aa13.35□□□□□ -0.27
PDXDC1-202ENST00000396410 HPS5Q9UPZ3 1129 aa13.35□□□□□ -0.27
PDXDC1-202ENST00000396410 A0A087WWV3 80 aa13.35□□□□□ -0.27
PDXDC1-202ENST00000396410 ZNF202O95125 648 aa13.35□□□□□ -0.27
PDXDC1-202ENST00000396410 CNNM3Q8NE01 707 aa13.35□□□□□ -0.27
PDXDC1-202ENST00000396410 TDRD7Q8NHU6 1098 aaKnown RBP13.35□□□□□ -0.27
PDXDC1-202ENST00000396410 TPTE2Q6XPS3 522 aa13.35□□□□□ -0.27
PDXDC1-202ENST00000396410 A0A1W2PQ27 194 aa13.34□□□□□ -0.27
PDXDC1-202ENST00000396410 A0A1W2PQ64 194 aa13.34□□□□□ -0.27
PDXDC1-202ENST00000396410 A0A1W2PQD8 194 aa13.34□□□□□ -0.27
PDXDC1-202ENST00000396410 FGFR2P21802 821 aa13.34□□□□□ -0.27
PDXDC1-202ENST00000396410 IFIT1BQ5T764 474 aaKnown RBP13.34□□□□□ -0.27
PDXDC1-202ENST00000396410 C11orf57Q6ZUT1 292 aaPredicted RBP13.34□□□□□ -0.27
PDXDC1-202ENST00000396410 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.34□□□□□ -0.27
PDXDC1-202ENST00000396410 DZIP1Q86YF9 867 aaKnown RBP13.34□□□□□ -0.27
PDXDC1-202ENST00000396410 NTSR2O95665 410 aa13.34□□□□□ -0.27
PDXDC1-202ENST00000396410 EVCP57679 992 aa13.34□□□□□ -0.27
PDXDC1-202ENST00000396410 CMTR1Q8N1G2 835 aaKnown RBP13.34□□□□□ -0.27
PDXDC1-202ENST00000396410 FBXL16Q8N461 479 aa13.34□□□□□ -0.27
PDXDC1-202ENST00000396410 MTMR7Q9Y216 660 aa13.34□□□□□ -0.27
PDXDC1-202ENST00000396410 CDC27P30260 824 aa13.34□□□□□ -0.27
PDXDC1-202ENST00000396410 ALX1Q15699 326 aa13.34□□□□□ -0.27
PDXDC1-202ENST00000396410 CEP131Q9UPN4 1083 aa13.34□□□□□ -0.27
PDXDC1-202ENST00000396410 JAG2Q9Y219 1238 aa13.34□□□□□ -0.27
PDXDC1-202ENST00000396410 RTCBQ9Y3I0 505 aaKnown RBP13.34□□□□□ -0.27
PDXDC1-202ENST00000396410 SALL1Q9NSC2 1324 aa13.33□□□□□ -0.27
PDXDC1-202ENST00000396410 GSG1L2A8MUP6 293 aa13.33□□□□□ -0.27
PDXDC1-202ENST00000396410 PRDM1O75626 825 aa13.33□□□□□ -0.27
PDXDC1-202ENST00000396410 SERPINC1P01008 464 aa13.33□□□□□ -0.27
PDXDC1-202ENST00000396410 CDK11BP21127 795 aaKnown RBP13.33□□□□□ -0.27
PDXDC1-202ENST00000396410 UBE4AQ14139 1066 aa13.33□□□□□ -0.27
PDXDC1-202ENST00000396410 SLC4A8Q2Y0W8 1093 aa13.33□□□□□ -0.27
PDXDC1-202ENST00000396410 CLEC4GQ6UXB4 293 aa13.33□□□□□ -0.27
PDXDC1-202ENST00000396410 TFCP2L1Q9NZI6 479 aa13.33□□□□□ -0.27
PDXDC1-202ENST00000396410 PFKFB1P16118 471 aa13.33□□□□□ -0.28
PDXDC1-202ENST00000396410 CRNKL1Q9BZJ0 848 aaKnown RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms