RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 GCC1Q96CN9 775 aa11□□□□□ -0.65
ATG4A-205ENST00000394892 FAM198AQ9UFP1 575 aa11□□□□□ -0.65
ATG4A-205ENST00000394892 AKAP11Q9UKA4 1901 aa10.99□□□□□ -0.65
ATG4A-205ENST00000394892 INHBEP58166 350 aa10.99□□□□□ -0.65
ATG4A-205ENST00000394892 ATP8B2P98198 1209 aa10.99□□□□□ -0.65
ATG4A-205ENST00000394892 VGLL4Q14135 290 aa10.99□□□□□ -0.65
ATG4A-205ENST00000394892 FKBP1CQ5VVH2 108 aa10.99□□□□□ -0.65
ATG4A-205ENST00000394892 MS4A4AQ96JQ5 239 aa10.99□□□□□ -0.65
ATG4A-205ENST00000394892 CFHR5Q9BXR6 569 aa10.99□□□□□ -0.65
ATG4A-205ENST00000394892 ELP3Q9H9T3 547 aa10.99□□□□□ -0.65
ATG4A-205ENST00000394892 HMG20BQ9P0W2 317 aa10.99□□□□□ -0.65
ATG4A-205ENST00000394892 DENND2AQ9ULE3 1009 aa10.99□□□□□ -0.65
ATG4A-205ENST00000394892 HDAC5Q9UQL6 1122 aa10.99□□□□□ -0.65
ATG4A-205ENST00000394892 ARAP2Q8WZ64 1704 aa10.98□□□□□ -0.65
ATG4A-205ENST00000394892 TESPA1A2RU30 521 aaPredicted RBP10.98□□□□□ -0.65
ATG4A-205ENST00000394892 UNCXA6NJT0 531 aa10.98□□□□□ -0.65
ATG4A-205ENST00000394892 SEMA3EO15041 775 aa10.98□□□□□ -0.65
ATG4A-205ENST00000394892 IREB2P48200 963 aaKnown RBP10.98□□□□□ -0.65
ATG4A-205ENST00000394892 TNFAIP1Q13829 316 aa10.98□□□□□ -0.65
ATG4A-205ENST00000394892 TBC1D9Q6ZT07 1266 aa10.98□□□□□ -0.65
ATG4A-205ENST00000394892 SH3BP5LQ7L8J4 393 aa10.98□□□□□ -0.65
ATG4A-205ENST00000394892 FAM83AQ86UY5 434 aa10.98□□□□□ -0.65
ATG4A-205ENST00000394892 IFNL1Q8IU54 200 aa10.98□□□□□ -0.65
ATG4A-205ENST00000394892 SNCAIPQ9Y6H5 919 aa10.98□□□□□ -0.65
ATG4A-205ENST00000394892 GAKO14976 1311 aa10.98□□□□□ -0.65
ATG4A-205ENST00000394892 RFX7Q2KHR2 1363 aa10.98□□□□□ -0.65
ATG4A-205ENST00000394892 ATRNL1Q5VV63 1379 aa10.98□□□□□ -0.65
ATG4A-205ENST00000394892 MANSC4A6NHS7 340 aaPredicted RBP10.97□□□□□ -0.65
ATG4A-205ENST00000394892 LDHBP07195 334 aaKnown RBP10.97□□□□□ -0.65
ATG4A-205ENST00000394892 ZBTB48P10074 688 aaPredicted RBP10.97□□□□□ -0.65
ATG4A-205ENST00000394892 MCAMP43121 646 aa10.97□□□□□ -0.65
ATG4A-205ENST00000394892 MAP3K9P80192 1104 aa10.97□□□□□ -0.65
ATG4A-205ENST00000394892 TCP10Q12799 353 aa10.97□□□□□ -0.65
ATG4A-205ENST00000394892 MIGA2Q7L4E1 593 aa10.97□□□□□ -0.65
ATG4A-205ENST00000394892 ANKRD13AQ8IZ07 590 aa10.97□□□□□ -0.65
ATG4A-205ENST00000394892 BRI3BPQ8WY22 251 aa10.97□□□□□ -0.65
ATG4A-205ENST00000394892 ZKSCAN4Q969J2 545 aaPredicted RBP10.97□□□□□ -0.65
ATG4A-205ENST00000394892 OPTNQ96CV9 577 aa10.97□□□□□ -0.65
ATG4A-205ENST00000394892 DDX4Q9NQI0 724 aaKnown RBP10.97□□□□□ -0.65
ATG4A-205ENST00000394892 GNL3LQ9NVN8 582 aaKnown RBP10.97□□□□□ -0.65
ATG4A-205ENST00000394892 NOP58Q9Y2X3 529 aaKnown RBP10.97□□□□□ -0.65
ATG4A-205ENST00000394892 PDS5AQ29RF7 1337 aaKnown RBP10.97□□□□□ -0.65
ATG4A-205ENST00000394892 MAST3O60307 1309 aa10.96□□□□□ -0.65
ATG4A-205ENST00000394892 WDHD1O75717 1129 aaPredicted RBP10.96□□□□□ -0.65
ATG4A-205ENST00000394892 KCNA4P22459 653 aa10.96□□□□□ -0.65
ATG4A-205ENST00000394892 ARID4AP29374 1257 aaPredicted RBP10.96□□□□□ -0.65
ATG4A-205ENST00000394892 INPP5BP32019 993 aa10.96□□□□□ -0.65
ATG4A-205ENST00000394892 RHBDL3P58872 404 aa10.96□□□□□ -0.65
ATG4A-205ENST00000394892 OTUD7BQ6GQQ9 843 aa10.96□□□□□ -0.65
ATG4A-205ENST00000394892 CEP85Q6P2H3 762 aa10.96□□□□□ -0.65
ATG4A-205ENST00000394892 ITPRIPQ8IWB1 547 aa10.96□□□□□ -0.65
ATG4A-205ENST00000394892 FAM151AQ8WW52 585 aa10.96□□□□□ -0.65
ATG4A-205ENST00000394892 FAM163AQ96GL9 167 aaPredicted RBP10.96□□□□□ -0.65
ATG4A-205ENST00000394892 NEUROD6Q96NK8 337 aa10.96□□□□□ -0.65
ATG4A-205ENST00000394892 DBNDD2Q9BQY9 259 aa10.96□□□□□ -0.65
ATG4A-205ENST00000394892 USP40Q9NVE5 1235 aa10.96□□□□□ -0.65
ATG4A-205ENST00000394892 TLR7Q9NYK1 1049 aaKnown RBP10.96□□□□□ -0.65
ATG4A-205ENST00000394892 ZNF112Q9UJU3 913 aa10.96□□□□□ -0.65
ATG4A-205ENST00000394892 AKAP2Q9Y2D5 859 aa10.96□□□□□ -0.65
ATG4A-205ENST00000394892 RPAP1Q9BWH6 1393 aaPredicted RBP10.95□□□□□ -0.66
ATG4A-205ENST00000394892 TNNI2P48788 182 aa10.95□□□□□ -0.66
ATG4A-205ENST00000394892 MECOMQ03112 1051 aa10.95□□□□□ -0.66
ATG4A-205ENST00000394892 G3BP1Q13283 466 aaKnown RBP eCLIP10.95□□□□□ -0.66
ATG4A-205ENST00000394892 MVPQ14764 893 aaKnown RBP10.95□□□□□ -0.66
ATG4A-205ENST00000394892 TNNI3KQ59H18 835 aa10.95□□□□□ -0.66
ATG4A-205ENST00000394892 SIRT2Q8IXJ6 389 aa10.95□□□□□ -0.66
ATG4A-205ENST00000394892 SPATA5Q8NB90 893 aa10.95□□□□□ -0.66
ATG4A-205ENST00000394892 IDI2Q9BXS1 227 aa10.95□□□□□ -0.66
ATG4A-205ENST00000394892 ABCF2Q9UG63 623 aa10.95□□□□□ -0.66
ATG4A-205ENST00000394892 FPGT-TNNI3KV9GXZ4 949 aa10.95□□□□□ -0.66
ATG4A-205ENST00000394892 PDE4DIPQ5VU43 2346 aa10.95□□□□□ -0.66
ATG4A-205ENST00000394892 DDTLA6NHG4 134 aaPredicted RBP10.94□□□□□ -0.66
ATG4A-205ENST00000394892 SPDYE5A6NIY4 337 aa10.94□□□□□ -0.66
ATG4A-205ENST00000394892 PHF20L1A8MW92 1017 aa10.94□□□□□ -0.66
ATG4A-205ENST00000394892 SURF6O75683 361 aaKnown RBP10.94□□□□□ -0.66
ATG4A-205ENST00000394892 RGS3P49796 1198 aa10.94□□□□□ -0.66
ATG4A-205ENST00000394892 CRHR2Q13324 411 aa10.94□□□□□ -0.66
ATG4A-205ENST00000394892 MOGSQ13724 837 aa10.94□□□□□ -0.66
ATG4A-205ENST00000394892 C20orf194Q5TEA3 1177 aa10.94□□□□□ -0.66
ATG4A-205ENST00000394892 FAM43AQ8N2R8 423 aa10.94□□□□□ -0.66
ATG4A-205ENST00000394892 NSUN4Q96CB9 384 aaKnown RBP10.94□□□□□ -0.66
ATG4A-205ENST00000394892 EAF2Q96CJ1 260 aaPredicted RBP10.94□□□□□ -0.66
ATG4A-205ENST00000394892 OTUD5Q96G74 571 aa10.94□□□□□ -0.66
ATG4A-205ENST00000394892 ERO1AQ96HE7 468 aa10.94□□□□□ -0.66
ATG4A-205ENST00000394892 WRNIP1Q96S55 665 aa10.94□□□□□ -0.66
ATG4A-205ENST00000394892 GPR108Q9NPR9 543 aa10.94□□□□□ -0.66
ATG4A-205ENST00000394892 SNRKQ9NRH2 765 aa10.94□□□□□ -0.66
ATG4A-205ENST00000394892 RNF216Q9NWF9 866 aaPredicted RBP10.94□□□□□ -0.66
ATG4A-205ENST00000394892 DBNLQ9UJU6 430 aaKnown RBP10.94□□□□□ -0.66
ATG4A-205ENST00000394892 TRIM17Q9Y577 477 aa10.94□□□□□ -0.66
ATG4A-205ENST00000394892 HTTP42858 3142 aa10.93□□□□□ -0.66
ATG4A-205ENST00000394892 ECM29Q5VYK3 1845 aa10.93□□□□□ -0.66
ATG4A-205ENST00000394892 MROH7-TTC4A0A0A0MT08 1334 aa10.93□□□□□ -0.66
ATG4A-205ENST00000394892 GPR75-ASB3A0A0A6YYF3 556 aa10.93□□□□□ -0.66
ATG4A-205ENST00000394892 IRF6O14896 467 aa10.93□□□□□ -0.66
ATG4A-205ENST00000394892 BTDP43251 543 aa10.93□□□□□ -0.66
ATG4A-205ENST00000394892 MAP3K10Q02779 954 aa10.93□□□□□ -0.66
ATG4A-205ENST00000394892 ARHGEF6Q15052 776 aa10.93□□□□□ -0.66
ATG4A-205ENST00000394892 ADGRA1Q86SQ6 560 aa10.93□□□□□ -0.66
ATG4A-205ENST00000394892 FTSJ3Q8IY81 847 aaKnown RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms