RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 FAM151AQ8WW52 585 aa18.31■□□□□ 0.52
HDAC6-204ENST00000376643 LRRFIP2Q9Y608 721 aaKnown RBP18.31■□□□□ 0.52
HDAC6-204ENST00000376643 RARSP54136 660 aaKnown RBP18.3■□□□□ 0.52
HDAC6-204ENST00000376643 CACNB3P54284 484 aa18.3■□□□□ 0.52
HDAC6-204ENST00000376643 KIF22Q14807 665 aa18.3■□□□□ 0.52
HDAC6-204ENST00000376643 PTPN18Q99952 460 aa18.3■□□□□ 0.52
HDAC6-204ENST00000376643 OTOFQ9HC10 1997 aa18.3■□□□□ 0.52
HDAC6-204ENST00000376643 PDS5AQ29RF7 1337 aaKnown RBP18.29■□□□□ 0.52
HDAC6-204ENST00000376643 PPATQ06203 517 aa18.29■□□□□ 0.52
HDAC6-204ENST00000376643 PPIL2Q13356 520 aa18.29■□□□□ 0.52
HDAC6-204ENST00000376643 SPTY2D1Q68D10 685 aaPredicted RBP18.29■□□□□ 0.52
HDAC6-204ENST00000376643 BRI3BPQ8WY22 251 aa18.29■□□□□ 0.52
HDAC6-204ENST00000376643 PTPN22Q9Y2R2 807 aa18.29■□□□□ 0.52
HDAC6-204ENST00000376643 DAGLAQ9Y4D2 1042 aa18.29■□□□□ 0.52
HDAC6-204ENST00000376643 MYH13Q9UKX3 1938 aa18.29■□□□□ 0.52
HDAC6-204ENST00000376643 MVPQ14764 893 aaKnown RBP18.28■□□□□ 0.52
HDAC6-204ENST00000376643 PRPF38BQ5VTL8 546 aaKnown RBP18.28■□□□□ 0.52
HDAC6-204ENST00000376643 CDAN1Q8IWY9 1227 aa18.28■□□□□ 0.52
HDAC6-204ENST00000376643 CD99L2Q8TCZ2 262 aa18.28■□□□□ 0.52
HDAC6-204ENST00000376643 SNCAIPQ9Y6H5 919 aa18.28■□□□□ 0.52
HDAC6-204ENST00000376643 PDE4DIPQ5VU43 2346 aa18.27■□□□□ 0.52
HDAC6-204ENST00000376643 GNRH1P01148 92 aa18.27■□□□□ 0.52
HDAC6-204ENST00000376643 MTX1Q13505 466 aa18.27■□□□□ 0.52
HDAC6-204ENST00000376643 NBPF11Q86T75 865 aa18.27■□□□□ 0.52
HDAC6-204ENST00000376643 DZIP1Q86YF9 867 aaKnown RBP18.27■□□□□ 0.52
HDAC6-204ENST00000376643 SRGAP3O43295 1099 aa18.26■□□□□ 0.51
HDAC6-204ENST00000376643 SLC34A2O95436 690 aa18.26■□□□□ 0.51
HDAC6-204ENST00000376643 PRDX5P30044 214 aa18.26■□□□□ 0.51
HDAC6-204ENST00000376643 CCDC102BQ68D86 513 aa18.26■□□□□ 0.51
HDAC6-204ENST00000376643 CDC42EP5Q6NZY7 148 aa18.26■□□□□ 0.51
HDAC6-204ENST00000376643 MEIS3Q99687 375 aa18.26■□□□□ 0.51
HDAC6-204ENST00000376643 USP40Q9NVE5 1235 aa18.26■□□□□ 0.51
HDAC6-204ENST00000376643 TLR2O60603 784 aa18.25■□□□□ 0.51
HDAC6-204ENST00000376643 ENTPD3O75355 529 aa18.25■□□□□ 0.51
HDAC6-204ENST00000376643 PHKA1P46020 1223 aa18.25■□□□□ 0.51
HDAC6-204ENST00000376643 PRMT2P55345 433 aa18.25■□□□□ 0.51
HDAC6-204ENST00000376643 CNKSR2Q8WXI2 1034 aa18.25■□□□□ 0.51
HDAC6-204ENST00000376643 ARMC5Q96C12 935 aa18.25■□□□□ 0.51
HDAC6-204ENST00000376643 IRF6O14896 467 aa18.24■□□□□ 0.51
HDAC6-204ENST00000376643 GNAI2P04899 355 aa18.24■□□□□ 0.51
HDAC6-204ENST00000376643 DIXDC1Q155Q3 683 aa18.24■□□□□ 0.51
HDAC6-204ENST00000376643 NOL9Q5SY16 702 aaKnown RBP18.24■□□□□ 0.51
HDAC6-204ENST00000376643 FAM43AQ8N2R8 423 aa18.24■□□□□ 0.51
HDAC6-204ENST00000376643 ZKSCAN4Q969J2 545 aaPredicted RBP18.24■□□□□ 0.51
HDAC6-204ENST00000376643 TMEM106CQ9BVX2 250 aa18.24■□□□□ 0.51
HDAC6-204ENST00000376643 ZNF112Q9UJU3 913 aa18.24■□□□□ 0.51
HDAC6-204ENST00000376643 PA2G4Q9UQ80 394 aaKnown RBP18.24■□□□□ 0.51
HDAC6-204ENST00000376643 MAP4K4O95819 1239 aaPredicted RBP18.23■□□□□ 0.51
HDAC6-204ENST00000376643 TCP10Q12799 353 aa18.23■□□□□ 0.51
HDAC6-204ENST00000376643 ATF7IPQ6VMQ6 1270 aa18.23■□□□□ 0.51
HDAC6-204ENST00000376643 MIGA2Q7L4E1 593 aa18.23■□□□□ 0.51
HDAC6-204ENST00000376643 ANKRD23Q86SG2 305 aa18.23■□□□□ 0.51
HDAC6-204ENST00000376643 IDI2Q9BXS1 227 aa18.23■□□□□ 0.51
HDAC6-204ENST00000376643 GAKO14976 1311 aa18.23■□□□□ 0.51
HDAC6-204ENST00000376643 A0A1B0GUL7 405 aa18.22■□□□□ 0.51
HDAC6-204ENST00000376643 BTBD19C9JJ37 291 aa18.22■□□□□ 0.51
HDAC6-204ENST00000376643 GSTO1P78417 241 aa18.22■□□□□ 0.51
HDAC6-204ENST00000376643 SLC9C1Q4G0N8 1177 aa18.22■□□□□ 0.51
HDAC6-204ENST00000376643 GORABQ5T7V8 394 aa18.22■□□□□ 0.51
HDAC6-204ENST00000376643 ERICH6Q7L0X2 663 aa18.22■□□□□ 0.51
HDAC6-204ENST00000376643 FAM163AQ96GL9 167 aaPredicted RBP18.22■□□□□ 0.51
HDAC6-204ENST00000376643 PICK1Q9NRD5 415 aa18.22■□□□□ 0.51
HDAC6-204ENST00000376643 ABCF2Q9UG63 623 aa18.22■□□□□ 0.51
HDAC6-204ENST00000376643 KCNH4Q9UQ05 1017 aa18.22■□□□□ 0.51
HDAC6-204ENST00000376643 LDHCP07864 332 aa18.21■□□□□ 0.51
HDAC6-204ENST00000376643 HOXD10P28358 340 aa18.21■□□□□ 0.51
HDAC6-204ENST00000376643 G3BP1Q13283 466 aaKnown RBP eCLIP18.21■□□□□ 0.518e-6■□□□□ 9
HDAC6-204ENST00000376643 RASGRF1Q13972 1273 aa18.21■□□□□ 0.51
HDAC6-204ENST00000376643 ZSCAN29Q8IWY8 852 aaPredicted RBP18.21■□□□□ 0.51
HDAC6-204ENST00000376643 GCC1Q96CN9 775 aa18.21■□□□□ 0.51
HDAC6-204ENST00000376643 XAGE2Q96GT9 111 aa18.21■□□□□ 0.51
HDAC6-204ENST00000376643 CXCL11O14625 94 aa18.2■□□□□ 0.5
HDAC6-204ENST00000376643 IGSF3O75054 1194 aa18.2■□□□□ 0.5
HDAC6-204ENST00000376643 TRIM27P14373 513 aa18.2■□□□□ 0.5
HDAC6-204ENST00000376643 INPP5BP32019 993 aa18.2■□□□□ 0.5
HDAC6-204ENST00000376643 LACTBP83111 547 aaPredicted RBP18.2■□□□□ 0.5
HDAC6-204ENST00000376643 NFIAQ12857 509 aa18.2■□□□□ 0.5
HDAC6-204ENST00000376643 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.2■□□□□ 0.5
HDAC6-204ENST00000376643 FRAT1Q92837 279 aaPredicted RBP18.2■□□□□ 0.5
HDAC6-204ENST00000376643 PARK7Q99497 189 aaKnown RBP18.2■□□□□ 0.5
HDAC6-204ENST00000376643 FAM198AQ9UFP1 575 aa18.2■□□□□ 0.5
HDAC6-204ENST00000376643 NPM3O75607 178 aaKnown RBP18.19■□□□□ 0.5
HDAC6-204ENST00000376643 UQCRFS1P1P0C7P4 283 aa18.19■□□□□ 0.5
HDAC6-204ENST00000376643 ADORA1P30542 326 aa18.19■□□□□ 0.5
HDAC6-204ENST00000376643 RGS3P49796 1198 aa18.19■□□□□ 0.5
HDAC6-204ENST00000376643 TIMM10P62072 90 aa18.19■□□□□ 0.5
HDAC6-204ENST00000376643 TFCP2Q12800 502 aa18.19■□□□□ 0.5
HDAC6-204ENST00000376643 ZKSCAN2Q63HK3 967 aa18.19■□□□□ 0.5
HDAC6-204ENST00000376643 FASTKD5Q7L8L6 764 aaKnown RBP18.19■□□□□ 0.5
HDAC6-204ENST00000376643 SCYL3Q8IZE3 742 aa18.19■□□□□ 0.5
HDAC6-204ENST00000376643 NEUROD6Q96NK8 337 aa18.19■□□□□ 0.5
HDAC6-204ENST00000376643 MROH7-TTC4A0A0A0MT08 1334 aa18.19■□□□□ 0.5
HDAC6-204ENST00000376643 PDHXO00330 501 aa18.18■□□□□ 0.5
HDAC6-204ENST00000376643 ZNF333Q96JL9 665 aa18.18■□□□□ 0.5
HDAC6-204ENST00000376643 BTDP43251 543 aa18.17■□□□□ 0.5
HDAC6-204ENST00000376643 NOL10Q9BSC4 688 aaKnown RBP18.17■□□□□ 0.5
HDAC6-204ENST00000376643 AK9Q5TCS8 1911 aa18.17■□□□□ 0.5
HDAC6-204ENST00000376643 GPR75-ASB3A0A0A6YYF3 556 aa18.16■□□□□ 0.5
HDAC6-204ENST00000376643 CTNND1O60716 968 aaKnown RBP18.16■□□□□ 0.5
HDAC6-204ENST00000376643 SLC4A8Q2Y0W8 1093 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms