RNA–Protein interactions for RNA: ENST00000376610.6

HDAC6-202, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 736 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-202ENST00000376610 SEMA3EO15041 775 aa22.98■■□□□ 1.27
HDAC6-202ENST00000376610 SNAPC2Q13487 334 aa22.98■■□□□ 1.27
HDAC6-202ENST00000376610 PRPF38BQ5VTL8 546 aaKnown RBP22.98■■□□□ 1.27
HDAC6-202ENST00000376610 FAM151AQ8WW52 585 aa22.98■■□□□ 1.27
HDAC6-202ENST00000376610 ZKSCAN4Q969J2 545 aaPredicted RBP22.98■■□□□ 1.27
HDAC6-202ENST00000376610 DENND2AQ9ULE3 1009 aa22.98■■□□□ 1.27
HDAC6-202ENST00000376610 SNCAIPQ9Y6H5 919 aa22.98■■□□□ 1.27
HDAC6-202ENST00000376610 DAGLAQ9Y4D2 1042 aa22.97■■□□□ 1.27
HDAC6-202ENST00000376610 KIAA0100Q14667 2235 aaKnown RBP22.96■■□□□ 1.27
HDAC6-202ENST00000376610 PPIL2Q13356 520 aa22.96■■□□□ 1.27
HDAC6-202ENST00000376610 DIXDC1Q155Q3 683 aa22.96■■□□□ 1.27
HDAC6-202ENST00000376610 FAM43AQ8N2R8 423 aa22.96■■□□□ 1.27
HDAC6-202ENST00000376610 ZGPATQ8N5A5 531 aaKnown RBP22.96■■□□□ 1.27
HDAC6-202ENST00000376610 ZCCHC17Q9NP64 241 aaKnown RBP22.96■■□□□ 1.27
HDAC6-202ENST00000376610 CCER2I3L3R5 266 aa22.95■■□□□ 1.26
HDAC6-202ENST00000376610 PRDX5P30044 214 aa22.95■■□□□ 1.26
HDAC6-202ENST00000376610 MIGA2Q7L4E1 593 aa22.95■■□□□ 1.26
HDAC6-202ENST00000376610 COPRSQ9NQ92 184 aa22.95■■□□□ 1.26
HDAC6-202ENST00000376610 SALL1Q9NSC2 1324 aa22.95■■□□□ 1.26
HDAC6-202ENST00000376610 PA2G4Q9UQ80 394 aaKnown RBP22.95■■□□□ 1.26
HDAC6-202ENST00000376610 IRF6O14896 467 aa22.94■■□□□ 1.26
HDAC6-202ENST00000376610 GNAI3P08754 354 aa22.94■■□□□ 1.26
HDAC6-202ENST00000376610 PPATQ06203 517 aa22.94■■□□□ 1.26
HDAC6-202ENST00000376610 TCP10Q12799 353 aa22.94■■□□□ 1.26
HDAC6-202ENST00000376610 KIF22Q14807 665 aa22.94■■□□□ 1.26
HDAC6-202ENST00000376610 CDC42EP5Q6NZY7 148 aa22.94■■□□□ 1.26
HDAC6-202ENST00000376610 ARHGAP45Q92619 1136 aa22.94■■□□□ 1.26
HDAC6-202ENST00000376610 MEIS3Q99687 375 aa22.94■■□□□ 1.26
HDAC6-202ENST00000376610 PHKA1P46020 1223 aa22.93■■□□□ 1.26
HDAC6-202ENST00000376610 RARSP54136 660 aaKnown RBP22.93■■□□□ 1.26
HDAC6-202ENST00000376610 USP40Q9NVE5 1235 aa22.93■■□□□ 1.26
HDAC6-202ENST00000376610 CCDC102BQ68D86 513 aa22.92■■□□□ 1.26
HDAC6-202ENST00000376610 NBPF11Q86T75 865 aa22.92■■□□□ 1.26
HDAC6-202ENST00000376610 SLF2Q8IX21 1173 aa22.92■■□□□ 1.26
HDAC6-202ENST00000376610 ARMC5Q96C12 935 aa22.92■■□□□ 1.26
HDAC6-202ENST00000376610 AKAP2Q9Y2D5 859 aa22.92■■□□□ 1.26
HDAC6-202ENST00000376610 MYH2Q9UKX2 1941 aa22.91■■□□□ 1.26
HDAC6-202ENST00000376610 BTBD19C9JJ37 291 aa22.91■■□□□ 1.26
HDAC6-202ENST00000376610 IPO8O15397 1037 aaKnown RBP22.91■■□□□ 1.26
HDAC6-202ENST00000376610 SRGAP3O43295 1099 aa22.91■■□□□ 1.26
HDAC6-202ENST00000376610 TLR2O60603 784 aa22.91■■□□□ 1.26
HDAC6-202ENST00000376610 DZIP1Q86YF9 867 aaKnown RBP22.91■■□□□ 1.26
HDAC6-202ENST00000376610 TMEM106CQ9BVX2 250 aa22.91■■□□□ 1.26
HDAC6-202ENST00000376610 HTTP42858 3142 aa22.9■■□□□ 1.26
HDAC6-202ENST00000376610 INPP5BP32019 993 aa22.9■■□□□ 1.26
HDAC6-202ENST00000376610 NFIAQ12857 509 aa22.9■■□□□ 1.26
HDAC6-202ENST00000376610 SLC9C1Q4G0N8 1177 aa22.9■■□□□ 1.26
HDAC6-202ENST00000376610 SPTY2D1Q68D10 685 aaPredicted RBP22.9■■□□□ 1.26
HDAC6-202ENST00000376610 RBBP6Q7Z6E9 1792 aaKnown RBP22.9■■□□□ 1.26
HDAC6-202ENST00000376610 ZBTB22O15209 634 aa22.89■■□□□ 1.25
HDAC6-202ENST00000376610 ADORA1P30542 326 aa22.89■■□□□ 1.25
HDAC6-202ENST00000376610 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.89■■□□□ 1.25
HDAC6-202ENST00000376610 ABCF2Q9UG63 623 aa22.89■■□□□ 1.25
HDAC6-202ENST00000376610 ZNF112Q9UJU3 913 aa22.89■■□□□ 1.25
HDAC6-202ENST00000376610 POTEFA5A3E0 1075 aa22.88■■□□□ 1.25
HDAC6-202ENST00000376610 MVPQ14764 893 aaKnown RBP22.88■■□□□ 1.25
HDAC6-202ENST00000376610 FAM198AQ9UFP1 575 aa22.88■■□□□ 1.25
HDAC6-202ENST00000376610 PDS5AQ29RF7 1337 aaKnown RBP22.87■■□□□ 1.25
HDAC6-202ENST00000376610 GNRH1P01148 92 aa22.87■■□□□ 1.25
HDAC6-202ENST00000376610 TIMM10P62072 90 aa22.87■■□□□ 1.25
HDAC6-202ENST00000376610 LACTBP83111 547 aaPredicted RBP22.87■■□□□ 1.25
HDAC6-202ENST00000376610 RASGRF1Q13972 1273 aa22.87■■□□□ 1.25
HDAC6-202ENST00000376610 ANKRD23Q86SG2 305 aa22.87■■□□□ 1.25
HDAC6-202ENST00000376610 ZSCAN29Q8IWY8 852 aaPredicted RBP22.87■■□□□ 1.25
HDAC6-202ENST00000376610 PTCH2Q9Y6C5 1203 aa22.87■■□□□ 1.25
HDAC6-202ENST00000376610 DOCK2Q92608 1830 aa22.87■■□□□ 1.25
HDAC6-202ENST00000376610 A0A1B0GUL7 405 aa22.86■■□□□ 1.25
HDAC6-202ENST00000376610 ENTPD3O75355 529 aa22.86■■□□□ 1.25
HDAC6-202ENST00000376610 RGS3P49796 1198 aa22.86■■□□□ 1.25
HDAC6-202ENST00000376610 CAP1Q01518 475 aa22.86■■□□□ 1.25
HDAC6-202ENST00000376610 TFCP2Q12800 502 aa22.86■■□□□ 1.25
HDAC6-202ENST00000376610 MTX1Q13505 466 aa22.86■■□□□ 1.25
HDAC6-202ENST00000376610 NOL9Q5SY16 702 aaKnown RBP22.86■■□□□ 1.25
HDAC6-202ENST00000376610 XAGE2Q96GT9 111 aa22.86■■□□□ 1.25
HDAC6-202ENST00000376610 ZNF333Q96JL9 665 aa22.86■■□□□ 1.25
HDAC6-202ENST00000376610 KCNH4Q9UQ05 1017 aa22.86■■□□□ 1.25
HDAC6-202ENST00000376610 CENPFP49454 3210 aa22.86■■□□□ 1.25
HDAC6-202ENST00000376610 GAKO14976 1311 aa22.85■■□□□ 1.25
HDAC6-202ENST00000376610 GORABQ5T7V8 394 aa22.85■■□□□ 1.25
HDAC6-202ENST00000376610 NEUROD6Q96NK8 337 aa22.85■■□□□ 1.25
HDAC6-202ENST00000376610 IDI2Q9BXS1 227 aa22.85■■□□□ 1.25
HDAC6-202ENST00000376610 PICK1Q9NRD5 415 aa22.85■■□□□ 1.25
HDAC6-202ENST00000376610 PDHXO00330 501 aa22.84■■□□□ 1.25
HDAC6-202ENST00000376610 GNAI2P04899 355 aa22.84■■□□□ 1.25
HDAC6-202ENST00000376610 PRMT2P55345 433 aa22.84■■□□□ 1.25
HDAC6-202ENST00000376610 ERICH6Q7L0X2 663 aa22.84■■□□□ 1.25
HDAC6-202ENST00000376610 FRAT1Q92837 279 aaPredicted RBP22.84■■□□□ 1.25
HDAC6-202ENST00000376610 SLC4A8Q2Y0W8 1093 aa22.83■■□□□ 1.25
HDAC6-202ENST00000376610 ATF7IPQ6VMQ6 1270 aa22.83■■□□□ 1.25
HDAC6-202ENST00000376610 GCC1Q96CN9 775 aa22.83■■□□□ 1.25
HDAC6-202ENST00000376610 CXCL11O14625 94 aa22.82■■□□□ 1.24
HDAC6-202ENST00000376610 TRIM27P14373 513 aa22.82■■□□□ 1.24
HDAC6-202ENST00000376610 BTDP43251 543 aa22.82■■□□□ 1.24
HDAC6-202ENST00000376610 G3BP1Q13283 466 aaKnown RBP eCLIP22.82■■□□□ 1.248e-6■□□□□ 9
HDAC6-202ENST00000376610 C17orf99Q6UX52 265 aa22.82■■□□□ 1.24
HDAC6-202ENST00000376610 ZFPM1Q8IX07 1006 aa22.82■■□□□ 1.24
HDAC6-202ENST00000376610 FAM163AQ96GL9 167 aaPredicted RBP22.82■■□□□ 1.24
HDAC6-202ENST00000376610 PARK7Q99497 189 aaKnown RBP22.82■■□□□ 1.24
HDAC6-202ENST00000376610 ARHGAP39Q9C0H5 1083 aa22.82■■□□□ 1.24
HDAC6-202ENST00000376610 CPA4Q9UI42 421 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms