RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 MIGA2Q7L4E1 593 aa16.5■□□□□ 0.23
CLCN6-205ENST00000376492 FAM83AQ86UY5 434 aa16.5■□□□□ 0.23
CLCN6-205ENST00000376492 ANKRD44Q8N8A2 993 aa16.5■□□□□ 0.23
CLCN6-205ENST00000376492 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.5■□□□□ 0.23
CLCN6-205ENST00000376492 KLHDC4Q8TBB5 520 aa16.5■□□□□ 0.23
CLCN6-205ENST00000376492 UTYO14607 1347 aa16.49■□□□□ 0.23
CLCN6-205ENST00000376492 E9PSI1 815 aa16.49■□□□□ 0.23
CLCN6-205ENST00000376492 RABL6Q3YEC7 729 aaPredicted RBP16.49■□□□□ 0.23
CLCN6-205ENST00000376492 C17orf99Q6UX52 265 aa16.49■□□□□ 0.23
CLCN6-205ENST00000376492 CHRDL2Q6WN34 429 aa16.49■□□□□ 0.23
CLCN6-205ENST00000376492 TRIM47Q96LD4 638 aa16.49■□□□□ 0.23
CLCN6-205ENST00000376492 RPAP1Q9BWH6 1393 aaPredicted RBP16.49■□□□□ 0.23
CLCN6-205ENST00000376492 GNRH1P01148 92 aa16.48■□□□□ 0.23
CLCN6-205ENST00000376492 PPATQ06203 517 aa16.48■□□□□ 0.23
CLCN6-205ENST00000376492 SLFN5Q08AF3 891 aa16.48■□□□□ 0.23
CLCN6-205ENST00000376492 ZNF341Q9BYN7 854 aa16.48■□□□□ 0.23
CLCN6-205ENST00000376492 ADGRA2Q96PE1 1338 aa16.47■□□□□ 0.23
CLCN6-205ENST00000376492 PDHXO00330 501 aa16.47■□□□□ 0.23
CLCN6-205ENST00000376492 PDE8BO95263 885 aa16.47■□□□□ 0.23
CLCN6-205ENST00000376492 OSBPP22059 807 aa16.47■□□□□ 0.23
CLCN6-205ENST00000376492 PSMC4P43686 418 aa16.47■□□□□ 0.23
CLCN6-205ENST00000376492 PRMT2P55345 433 aa16.47■□□□□ 0.23
CLCN6-205ENST00000376492 FKBP1CQ5VVH2 108 aa16.47■□□□□ 0.23
CLCN6-205ENST00000376492 DCAF15Q66K64 600 aa16.47■□□□□ 0.23
CLCN6-205ENST00000376492 HOOK2Q96ED9 719 aa16.47■□□□□ 0.23
CLCN6-205ENST00000376492 SRRDQ9UH36 339 aa16.47■□□□□ 0.23
CLCN6-205ENST00000376492 MAST3O60307 1309 aa16.46■□□□□ 0.23
CLCN6-205ENST00000376492 TCP10Q12799 353 aa16.46■□□□□ 0.23
CLCN6-205ENST00000376492 MOGSQ13724 837 aa16.46■□□□□ 0.23
CLCN6-205ENST00000376492 HHIPL2Q6UWX4 724 aa16.46■□□□□ 0.23
CLCN6-205ENST00000376492 ANKRD23Q86SG2 305 aa16.46■□□□□ 0.23
CLCN6-205ENST00000376492 TRMT2AQ8IZ69 625 aaKnown RBP16.46■□□□□ 0.23
CLCN6-205ENST00000376492 MRIQ9BWK5 157 aa16.46■□□□□ 0.23
CLCN6-205ENST00000376492 FGFR2P21802 821 aa16.45■□□□□ 0.22
CLCN6-205ENST00000376492 NFIAQ12857 509 aa16.45■□□□□ 0.22
CLCN6-205ENST00000376492 PUM3Q15397 648 aaKnown RBP16.45■□□□□ 0.22
CLCN6-205ENST00000376492 DIXDC1Q155Q3 683 aa16.45■□□□□ 0.22
CLCN6-205ENST00000376492 RAET1EQ8TD07 263 aa16.45■□□□□ 0.22
CLCN6-205ENST00000376492 DPF3Q92784 378 aa16.45■□□□□ 0.22
CLCN6-205ENST00000376492 CDCA7LQ96GN5 454 aa16.45■□□□□ 0.22
CLCN6-205ENST00000376492 RBM27Q9P2N5 1060 aaKnown RBP16.45■□□□□ 0.22
CLCN6-205ENST00000376492 KCNH4Q9UQ05 1017 aa16.45■□□□□ 0.22
CLCN6-205ENST00000376492 SUGT1Q9Y2Z0 365 aa16.45■□□□□ 0.22
CLCN6-205ENST00000376492 MYPNQ86TC9 1320 aa16.45■□□□□ 0.22
CLCN6-205ENST00000376492 FMNL1O95466 1100 aaPredicted RBP16.44■□□□□ 0.22
CLCN6-205ENST00000376492 CCL5P13501 91 aa16.44■□□□□ 0.22
CLCN6-205ENST00000376492 GRK4P32298 578 aa16.44■□□□□ 0.22
CLCN6-205ENST00000376492 PRKCZQ05513 592 aa16.44■□□□□ 0.22
CLCN6-205ENST00000376492 CDC42EP5Q6NZY7 148 aa16.44■□□□□ 0.22
CLCN6-205ENST00000376492 FAM151AQ8WW52 585 aa16.44■□□□□ 0.22
CLCN6-205ENST00000376492 ZNF112Q9UJU3 913 aa16.44■□□□□ 0.22
CLCN6-205ENST00000376492 DAGLAQ9Y4D2 1042 aa16.44■□□□□ 0.22
CLCN6-205ENST00000376492 KIF16BQ96L93 1317 aa16.44■□□□□ 0.22
CLCN6-205ENST00000376492 IFIT1P09914 478 aaKnown RBP16.43■□□□□ 0.22
CLCN6-205ENST00000376492 CYP2C8P10632 490 aa16.43■□□□□ 0.22
CLCN6-205ENST00000376492 UBE2Q1Q7Z7E8 422 aa16.43■□□□□ 0.22
CLCN6-205ENST00000376492 HOXD10P28358 340 aa16.42■□□□□ 0.22
CLCN6-205ENST00000376492 PRDX5P30044 214 aa16.42■□□□□ 0.22
CLCN6-205ENST00000376492 GJA8P48165 433 aa16.42■□□□□ 0.22
CLCN6-205ENST00000376492 GPAT2Q6NUI2 795 aa16.42■□□□□ 0.22
CLCN6-205ENST00000376492 RNF208Q9H0X6 261 aa16.42■□□□□ 0.22
CLCN6-205ENST00000376492 FAM198AQ9UFP1 575 aa16.42■□□□□ 0.22
CLCN6-205ENST00000376492 GJB1P08034 283 aa16.41■□□□□ 0.22
CLCN6-205ENST00000376492 BCRP11274 1271 aa16.41■□□□□ 0.22
CLCN6-205ENST00000376492 NOL9Q5SY16 702 aaKnown RBP16.41■□□□□ 0.22
CLCN6-205ENST00000376492 ZFPM1Q8IX07 1006 aa16.41■□□□□ 0.22
CLCN6-205ENST00000376492 NKX2-3Q8TAU0 364 aa16.41■□□□□ 0.22
CLCN6-205ENST00000376492 WDR66Q8TBY9 1149 aa16.41■□□□□ 0.22
CLCN6-205ENST00000376492 PARK7Q99497 189 aaKnown RBP16.41■□□□□ 0.22
CLCN6-205ENST00000376492 BIN2Q9UBW5 565 aaPredicted RBP16.41■□□□□ 0.22
CLCN6-205ENST00000376492 LAMA3Q16787 3333 aa16.4■□□□□ 0.22
CLCN6-205ENST00000376492 SLC5A1P13866 664 aa16.4■□□□□ 0.22
CLCN6-205ENST00000376492 RFX5P48382 616 aaPredicted RBP16.4■□□□□ 0.22
CLCN6-205ENST00000376492 FCGRTP55899 365 aa16.4■□□□□ 0.22
CLCN6-205ENST00000376492 MRPL50Q8N5N7 158 aaKnown RBP16.4■□□□□ 0.22
CLCN6-205ENST00000376492 LPIN2Q92539 896 aa16.4■□□□□ 0.22
CLCN6-205ENST00000376492 USP44Q9H0E7 712 aa16.4■□□□□ 0.22
CLCN6-205ENST00000376492 UNC93B1Q9H1C4 597 aa16.4■□□□□ 0.22
CLCN6-205ENST00000376492 GABRQQ9UN88 632 aa16.4■□□□□ 0.22
CLCN6-205ENST00000376492 ATRNL1Q5VV63 1379 aa16.39■□□□□ 0.21
CLCN6-205ENST00000376492 EYA2O00167 538 aa16.39■□□□□ 0.21
CLCN6-205ENST00000376492 U2AF1L4Q8WU68 220 aaKnown RBP16.39■□□□□ 0.21
CLCN6-205ENST00000376492 PRO3102Q9H379 93 aa16.39■□□□□ 0.21
CLCN6-205ENST00000376492 USP40Q9NVE5 1235 aa16.39■□□□□ 0.21
CLCN6-205ENST00000376492 FARP2O94887 1054 aaPredicted RBP16.38■□□□□ 0.21
CLCN6-205ENST00000376492 CT47B1P0C2W7 299 aaPredicted RBP16.38■□□□□ 0.21
CLCN6-205ENST00000376492 SLURP2P0DP57 97 aa16.38■□□□□ 0.21
CLCN6-205ENST00000376492 UBXN2AP68543 259 aa16.38■□□□□ 0.21
CLCN6-205ENST00000376492 ATG9AQ7Z3C6 839 aa16.38■□□□□ 0.21
CLCN6-205ENST00000376492 HTATIP2Q9BUP3 242 aa16.38■□□□□ 0.21
CLCN6-205ENST00000376492 PHF20L1A8MW92 1017 aa16.37■□□□□ 0.21
CLCN6-205ENST00000376492 CXCL11O14625 94 aa16.37■□□□□ 0.21
CLCN6-205ENST00000376492 ELNP15502 786 aa16.37■□□□□ 0.21
CLCN6-205ENST00000376492 SLAIN1Q8ND83 568 aa16.37■□□□□ 0.21
CLCN6-205ENST00000376492 SIL1Q9H173 461 aa16.37■□□□□ 0.21
CLCN6-205ENST00000376492 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.37■□□□□ 0.21
CLCN6-205ENST00000376492 ZHX2Q9Y6X8 837 aa16.37■□□□□ 0.21
CLCN6-205ENST00000376492 PTPRCP08575 1304 aa16.37■□□□□ 0.21
CLCN6-205ENST00000376492 A0A0G2JLL6 359 aaPredicted RBP16.36■□□□□ 0.21
CLCN6-205ENST00000376492 ZBTB7BO15156 539 aaPredicted RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms