RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 FRAT1Q92837 279 aaPredicted RBP15.19■□□□□ 0.02
LSM2-208ENST00000375661 KAZALD1Q96I82 304 aa15.19■□□□□ 0.02
LSM2-208ENST00000375661 SUCLG2Q96I99 432 aa15.19■□□□□ 0.02
LSM2-208ENST00000375661 API5Q9BZZ5 524 aaKnown RBP15.19■□□□□ 0.02
LSM2-208ENST00000375661 BTBD19C9JJ37 291 aa15.18■□□□□ 0.02
LSM2-208ENST00000375661 FRAT2O75474 233 aaPredicted RBP15.18■□□□□ 0.02
LSM2-208ENST00000375661 PDE8BO95263 885 aa15.18■□□□□ 0.02
LSM2-208ENST00000375661 TRIM27P14373 513 aa15.18■□□□□ 0.02
LSM2-208ENST00000375661 PPATQ06203 517 aa15.18■□□□□ 0.02
LSM2-208ENST00000375661 WRNIP1Q96S55 665 aa15.18■□□□□ 0.02
LSM2-208ENST00000375661 MGAMO43451 1857 aa15.18■□□□□ 0.02
LSM2-208ENST00000375661 IRF6O14896 467 aa15.17■□□□□ 0.02
LSM2-208ENST00000375661 IPO8O15397 1037 aaKnown RBP15.17■□□□□ 0.02
LSM2-208ENST00000375661 CHAF1AQ13111 956 aaPredicted RBP15.17■□□□□ 0.02
LSM2-208ENST00000375661 GRIK5Q16478 980 aa15.17■□□□□ 0.02
LSM2-208ENST00000375661 METTL24Q5JXM2 366 aa15.17■□□□□ 0.02
LSM2-208ENST00000375661 ZKSCAN2Q63HK3 967 aa15.17■□□□□ 0.02
LSM2-208ENST00000375661 HHIPL2Q6UWX4 724 aa15.17■□□□□ 0.02
LSM2-208ENST00000375661 ATF7IPQ6VMQ6 1270 aa15.17■□□□□ 0.02
LSM2-208ENST00000375661 COLQQ9Y215 455 aaPredicted RBP15.17■□□□□ 0.02
LSM2-208ENST00000375661 BRCA2P51587 3418 aa15.17■□□□□ 0.02
LSM2-208ENST00000375661 NBPF7P0C2Y1 421 aaPredicted RBP15.16■□□□□ 0.02
LSM2-208ENST00000375661 HOXD10P28358 340 aa15.16■□□□□ 0.02
LSM2-208ENST00000375661 CACNB3P54284 484 aa15.16■□□□□ 0.02
LSM2-208ENST00000375661 VGLL2Q8N8G2 317 aa15.16■□□□□ 0.02
LSM2-208ENST00000375661 NKX2-3Q8TAU0 364 aa15.16■□□□□ 0.02
LSM2-208ENST00000375661 ZKSCAN4Q969J2 545 aaPredicted RBP15.16■□□□□ 0.02
LSM2-208ENST00000375661 ZNF341Q9BYN7 854 aa15.16■□□□□ 0.02
LSM2-208ENST00000375661 IQSEC3Q9UPP2 1182 aaPredicted RBP15.16■□□□□ 0.02
LSM2-208ENST00000375661 LRRC24Q50LG9 513 aa15.15■□□□□ 0.02
LSM2-208ENST00000375661 APOBEC3HQ6NTF7 200 aaKnown RBP15.15■□□□□ 0.02
LSM2-208ENST00000375661 C17orf99Q6UX52 265 aa15.15■□□□□ 0.02
LSM2-208ENST00000375661 ANKRD23Q86SG2 305 aa15.15■□□□□ 0.02
LSM2-208ENST00000375661 SH3TC2Q8TF17 1288 aa15.15■□□□□ 0.02
LSM2-208ENST00000375661 ARHGAP39Q9C0H5 1083 aa15.15■□□□□ 0.02
LSM2-208ENST00000375661 BICC1Q9H694 974 aaKnown RBP15.15■□□□□ 0.02
LSM2-208ENST00000375661 IFIT1P09914 478 aaKnown RBP15.14■□□□□ 0.01
LSM2-208ENST00000375661 FAM151AQ8WW52 585 aa15.14■□□□□ 0.01
LSM2-208ENST00000375661 CLUAP1Q96AJ1 413 aa15.14■□□□□ 0.01
LSM2-208ENST00000375661 SRRDQ9UH36 339 aa15.14■□□□□ 0.01
LSM2-208ENST00000375661 ZNF112Q9UJU3 913 aa15.14■□□□□ 0.01
LSM2-208ENST00000375661 DOCK2Q92608 1830 aa15.13■□□□□ 0.01
LSM2-208ENST00000375661 BCAMP50895 628 aa15.13■□□□□ 0.01
LSM2-208ENST00000375661 PUM3Q15397 648 aaKnown RBP15.13■□□□□ 0.01
LSM2-208ENST00000375661 ANKRD44Q8N8A2 993 aa15.13■□□□□ 0.01
LSM2-208ENST00000375661 WDR66Q8TBY9 1149 aa15.13■□□□□ 0.01
LSM2-208ENST00000375661 KCNH4Q9UQ05 1017 aa15.13■□□□□ 0.01
LSM2-208ENST00000375661 H0YGN5 161 aa15.12■□□□□ 0.01
LSM2-208ENST00000375661 RLBP1P12271 317 aa15.12■□□□□ 0.01
LSM2-208ENST00000375661 FGFR2P21802 821 aa15.12■□□□□ 0.01
LSM2-208ENST00000375661 PSMC4P43686 418 aa15.12■□□□□ 0.01
LSM2-208ENST00000375661 NOL9Q5SY16 702 aaKnown RBP15.12■□□□□ 0.01
LSM2-208ENST00000375661 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.12■□□□□ 0.01
LSM2-208ENST00000375661 ADGRA2Q96PE1 1338 aa15.12■□□□□ 0.01
LSM2-208ENST00000375661 PDHXO00330 501 aa15.11■□□□□ 0.01
LSM2-208ENST00000375661 MYCP01106 439 aaPredicted RBP15.11■□□□□ 0.01
LSM2-208ENST00000375661 INPP5BP32019 993 aa15.11■□□□□ 0.01
LSM2-208ENST00000375661 GRK4P32298 578 aa15.11■□□□□ 0.01
LSM2-208ENST00000375661 GJA8P48165 433 aa15.11■□□□□ 0.01
LSM2-208ENST00000375661 TMEM57Q8N5G2 664 aa15.11■□□□□ 0.01
LSM2-208ENST00000375661 RAET1EQ8TD07 263 aa15.11■□□□□ 0.01
LSM2-208ENST00000375661 TRIM47Q96LD4 638 aa15.11■□□□□ 0.01
LSM2-208ENST00000375661 CPA4Q9UI42 421 aa15.11■□□□□ 0.01
LSM2-208ENST00000375661 PTPRFP10586 1907 aa15.11■□□□□ 0.01
LSM2-208ENST00000375661 MYH2Q9UKX2 1941 aa15.1■□□□□ 0.01
LSM2-208ENST00000375661 FMNL1O95466 1100 aaPredicted RBP15.1■□□□□ 0.01
LSM2-208ENST00000375661 GJB1P08034 283 aa15.1■□□□□ 0.01
LSM2-208ENST00000375661 SLC5A1P13866 664 aa15.1■□□□□ 0.01
LSM2-208ENST00000375661 CAPN2P17655 700 aa15.1■□□□□ 0.01
LSM2-208ENST00000375661 OSBPP22059 807 aa15.1■□□□□ 0.01
LSM2-208ENST00000375661 CTGFP29279 349 aa15.1■□□□□ 0.01
LSM2-208ENST00000375661 UBXN2AP68543 259 aa15.1■□□□□ 0.01
LSM2-208ENST00000375661 MIGA2Q7L4E1 593 aa15.1■□□□□ 0.01
LSM2-208ENST00000375661 PANK1Q8TE04 598 aa15.1■□□□□ 0.01
LSM2-208ENST00000375661 LPIN2Q92539 896 aa15.1■□□□□ 0.01
LSM2-208ENST00000375661 SHISA4Q96DD7 197 aa15.1■□□□□ 0.01
LSM2-208ENST00000375661 PARK7Q99497 189 aaKnown RBP15.1■□□□□ 0.01
LSM2-208ENST00000375661 HTATIP2Q9BUP3 242 aa15.1■□□□□ 0.01
LSM2-208ENST00000375661 USP44Q9H0E7 712 aa15.1■□□□□ 0.01
LSM2-208ENST00000375661 MYPNQ86TC9 1320 aa15.1■□□□□ 0.01
LSM2-208ENST00000375661 CXCL11O14625 94 aa15.09■□□□□ 0.01
LSM2-208ENST00000375661 MTFR1Q15390 333 aa15.09■□□□□ 0.01
LSM2-208ENST00000375661 FTSJ3Q8IY81 847 aaKnown RBP15.09■□□□□ 0.01
LSM2-208ENST00000375661 DPF3Q92784 378 aa15.09■□□□□ 0.01
LSM2-208ENST00000375661 DAGLAQ9Y4D2 1042 aa15.09■□□□□ 0.01
LSM2-208ENST00000375661 DOCK1Q14185 1865 aa15.08■□□□□ 0.01
LSM2-208ENST00000375661 EYA2O00167 538 aa15.08■□□□□ 0
LSM2-208ENST00000375661 ZBTB22O15209 634 aa15.08■□□□□ 0
LSM2-208ENST00000375661 FCGRTP55899 365 aa15.08■□□□□ 0
LSM2-208ENST00000375661 MOGSQ13724 837 aa15.08■□□□□ 0
LSM2-208ENST00000375661 C20orf194Q5TEA3 1177 aa15.08■□□□□ 0
LSM2-208ENST00000375661 CDC42EP5Q6NZY7 148 aa15.08■□□□□ 0
LSM2-208ENST00000375661 UBE2Q1Q7Z7E8 422 aa15.08■□□□□ 0
LSM2-208ENST00000375661 KLHDC4Q8TBB5 520 aa15.08■□□□□ 0
LSM2-208ENST00000375661 FBXO3Q9UK99 471 aa15.08■□□□□ 0
LSM2-208ENST00000375661 SALL1Q9NSC2 1324 aa15.08■□□□□ 0
LSM2-208ENST00000375661 CEP290O15078 2479 aa15.07■□□□□ 0
LSM2-208ENST00000375661 BCRP11274 1271 aa15.07■□□□□ 0
LSM2-208ENST00000375661 CCL5P13501 91 aa15.07■□□□□ 0
LSM2-208ENST00000375661 RRP1P56182 461 aaKnown RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms