RNA–Protein interactions for RNA: ENST00000375271.4

PTCH1-202, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-202ENST00000375271 BCAMP50895 628 aa17.68■□□□□ 0.42
PTCH1-202ENST00000375271 FXR1P51114 621 aaKnown RBP eCLIP17.68■□□□□ 0.42
PTCH1-202ENST00000375271 CAP1Q01518 475 aa17.68■□□□□ 0.42
PTCH1-202ENST00000375271 GRIK5Q16478 980 aa17.68■□□□□ 0.42
PTCH1-202ENST00000375271 HHIPL2Q6UWX4 724 aa17.68■□□□□ 0.42
PTCH1-202ENST00000375271 WDR66Q8TBY9 1149 aa17.68■□□□□ 0.42
PTCH1-202ENST00000375271 MRIQ9BWK5 157 aa17.68■□□□□ 0.42
PTCH1-202ENST00000375271 CPA4Q9UI42 421 aa17.68■□□□□ 0.42
PTCH1-202ENST00000375271 MYH13Q9UKX3 1938 aa17.68■□□□□ 0.42
PTCH1-202ENST00000375271 UBXN2AP68543 259 aa17.67■□□□□ 0.42
PTCH1-202ENST00000375271 ANKRD23Q86SG2 305 aa17.67■□□□□ 0.42
PTCH1-202ENST00000375271 TRIM47Q96LD4 638 aa17.67■□□□□ 0.42
PTCH1-202ENST00000375271 PARK7Q99497 189 aaKnown RBP17.67■□□□□ 0.42
PTCH1-202ENST00000375271 HTATIP2Q9BUP3 242 aa17.67■□□□□ 0.42
PTCH1-202ENST00000375271 SPINK5Q9NQ38 1064 aaPredicted RBP17.67■□□□□ 0.42
PTCH1-202ENST00000375271 GNL3LQ9NVN8 582 aaKnown RBP17.67■□□□□ 0.42
PTCH1-202ENST00000375271 KIF16BQ96L93 1317 aa17.67■□□□□ 0.42
PTCH1-202ENST00000375271 H0YGN5 161 aa17.66■□□□□ 0.42
PTCH1-202ENST00000375271 PDHXO00330 501 aa17.66■□□□□ 0.42
PTCH1-202ENST00000375271 GRK4P32298 578 aa17.66■□□□□ 0.42
PTCH1-202ENST00000375271 TCP10Q12799 353 aa17.66■□□□□ 0.42
PTCH1-202ENST00000375271 RABL6Q3YEC7 729 aaPredicted RBP17.66■□□□□ 0.42
PTCH1-202ENST00000375271 FAM151AQ8WW52 585 aa17.66■□□□□ 0.42
PTCH1-202ENST00000375271 SRRDQ9UH36 339 aa17.66■□□□□ 0.42
PTCH1-202ENST00000375271 MYPNQ86TC9 1320 aa17.66■□□□□ 0.42
PTCH1-202ENST00000375271 INPP5BP32019 993 aa17.65■□□□□ 0.42
PTCH1-202ENST00000375271 APOBEC3HQ6NTF7 200 aaKnown RBP17.65■□□□□ 0.42
PTCH1-202ENST00000375271 FAM9BQ8IZU0 186 aa17.65■□□□□ 0.42
PTCH1-202ENST00000375271 KAZALD1Q96I82 304 aa17.65■□□□□ 0.42
PTCH1-202ENST00000375271 UTYO14607 1347 aa17.65■□□□□ 0.42
PTCH1-202ENST00000375271 PTPRCP08575 1304 aa17.65■□□□□ 0.42
PTCH1-202ENST00000375271 ZSWIM8A7E2V4 1837 aa17.64■□□□□ 0.41
PTCH1-202ENST00000375271 FCGRTP55899 365 aa17.64■□□□□ 0.41
PTCH1-202ENST00000375271 C17orf99Q6UX52 265 aa17.64■□□□□ 0.41
PTCH1-202ENST00000375271 CHRDL2Q6WN34 429 aa17.64■□□□□ 0.41
PTCH1-202ENST00000375271 KLHDC4Q8TBB5 520 aa17.64■□□□□ 0.41
PTCH1-202ENST00000375271 LPIN2Q92539 896 aa17.64■□□□□ 0.41
PTCH1-202ENST00000375271 PICK1Q9NRD5 415 aa17.64■□□□□ 0.41
PTCH1-202ENST00000375271 LDHBP07195 334 aaKnown RBP17.63■□□□□ 0.41
PTCH1-202ENST00000375271 OSBPP22059 807 aa17.63■□□□□ 0.41
PTCH1-202ENST00000375271 ZSCAN29Q8IWY8 852 aaPredicted RBP17.63■□□□□ 0.41
PTCH1-202ENST00000375271 ANKRD44Q8N8A2 993 aa17.63■□□□□ 0.41
PTCH1-202ENST00000375271 VGLL2Q8N8G2 317 aa17.63■□□□□ 0.41
PTCH1-202ENST00000375271 RNF208Q9H0X6 261 aa17.63■□□□□ 0.41
PTCH1-202ENST00000375271 NR2E3Q9Y5X4 410 aa17.63■□□□□ 0.41
PTCH1-202ENST00000375271 MTFR1Q15390 333 aa17.62■□□□□ 0.41
PTCH1-202ENST00000375271 EYA2O00167 538 aa17.61■□□□□ 0.41
PTCH1-202ENST00000375271 CCL5P13501 91 aa17.61■□□□□ 0.41
PTCH1-202ENST00000375271 FASTKD5Q7L8L6 764 aaKnown RBP17.61■□□□□ 0.41
PTCH1-202ENST00000375271 SLAIN1Q8ND83 568 aa17.61■□□□□ 0.41
PTCH1-202ENST00000375271 USP40Q9NVE5 1235 aa17.61■□□□□ 0.41
PTCH1-202ENST00000375271 KCNH4Q9UQ05 1017 aa17.61■□□□□ 0.41
PTCH1-202ENST00000375271 DAGLAQ9Y4D2 1042 aa17.61■□□□□ 0.41
PTCH1-202ENST00000375271 CXCL11O14625 94 aa17.6■□□□□ 0.41
PTCH1-202ENST00000375271 DIXDC1Q155Q3 683 aa17.6■□□□□ 0.41
PTCH1-202ENST00000375271 NOL9Q5SY16 702 aaKnown RBP17.6■□□□□ 0.41
PTCH1-202ENST00000375271 CDC42EP5Q6NZY7 148 aa17.6■□□□□ 0.41
PTCH1-202ENST00000375271 GADL1Q6ZQY3 521 aa17.6■□□□□ 0.41
PTCH1-202ENST00000375271 ZGPATQ8N5A5 531 aaKnown RBP17.6■□□□□ 0.41
PTCH1-202ENST00000375271 SMCR8Q8TEV9 937 aaPredicted RBP17.6■□□□□ 0.41
PTCH1-202ENST00000375271 CEP126Q9P2H0 1117 aa17.6■□□□□ 0.41
PTCH1-202ENST00000375271 LRRFIP2Q9Y608 721 aaKnown RBP17.6■□□□□ 0.41
PTCH1-202ENST00000375271 GJB1P08034 283 aa17.59■□□□□ 0.41
PTCH1-202ENST00000375271 FGFR2P21802 821 aa17.59■□□□□ 0.41
PTCH1-202ENST00000375271 GJA8P48165 433 aa17.59■□□□□ 0.41
PTCH1-202ENST00000375271 PRKCZQ05513 592 aa17.59■□□□□ 0.41
PTCH1-202ENST00000375271 ATP2B3Q16720 1220 aa17.59■□□□□ 0.41
PTCH1-202ENST00000375271 DZIP1Q86YF9 867 aaKnown RBP17.59■□□□□ 0.41
PTCH1-202ENST00000375271 SLF2Q8IX21 1173 aa17.59■□□□□ 0.41
PTCH1-202ENST00000375271 MRPL50Q8N5N7 158 aaKnown RBP17.59■□□□□ 0.41
PTCH1-202ENST00000375271 SIL1Q9H173 461 aa17.59■□□□□ 0.41
PTCH1-202ENST00000375271 TAOK2Q9UL54 1235 aa17.59■□□□□ 0.41
PTCH1-202ENST00000375271 DENND2AQ9ULE3 1009 aa17.59■□□□□ 0.41
PTCH1-202ENST00000375271 HDAC5Q9UQL6 1122 aa17.59■□□□□ 0.41
PTCH1-202ENST00000375271 FARP2O94887 1054 aaPredicted RBP17.58■□□□□ 0.4
PTCH1-202ENST00000375271 PRDX5P30044 214 aa17.58■□□□□ 0.4
PTCH1-202ENST00000375271 ZNF112Q9UJU3 913 aa17.58■□□□□ 0.4
PTCH1-202ENST00000375271 CEP290O15078 2479 aa17.57■□□□□ 0.4
PTCH1-202ENST00000375271 SEMA3EO15041 775 aa17.57■□□□□ 0.4
PTCH1-202ENST00000375271 UBTFL1P0CB47 393 aaPredicted RBP17.57■□□□□ 0.4
PTCH1-202ENST00000375271 CYP2C8P10632 490 aa17.57■□□□□ 0.4
PTCH1-202ENST00000375271 NFIAQ12857 509 aa17.57■□□□□ 0.4
PTCH1-202ENST00000375271 SCYL3Q8IZE3 742 aa17.57■□□□□ 0.4
PTCH1-202ENST00000375271 SHISA4Q96DD7 197 aa17.57■□□□□ 0.4
PTCH1-202ENST00000375271 ZHX2Q9Y6X8 837 aa17.57■□□□□ 0.4
PTCH1-202ENST00000375271 DOCK2Q92608 1830 aa17.56■□□□□ 0.4
PTCH1-202ENST00000375271 TNPO2O14787 897 aaKnown RBP17.56■□□□□ 0.4
PTCH1-202ENST00000375271 U2AF1L4Q8WU68 220 aaKnown RBP17.56■□□□□ 0.4
PTCH1-202ENST00000375271 USP44Q9H0E7 712 aa17.56■□□□□ 0.4
PTCH1-202ENST00000375271 ADGRA2Q96PE1 1338 aa17.55■□□□□ 0.4
PTCH1-202ENST00000375271 ADCY3O60266 1144 aa17.55■□□□□ 0.4
PTCH1-202ENST00000375271 TFRCP02786 760 aaKnown RBP17.55■□□□□ 0.4
PTCH1-202ENST00000375271 CTGFP29279 349 aa17.55■□□□□ 0.4
PTCH1-202ENST00000375271 RGS3P49796 1198 aa17.55■□□□□ 0.4
PTCH1-202ENST00000375271 SMC4Q9NTJ3 1288 aa17.55■□□□□ 0.4
PTCH1-202ENST00000375271 RBM27Q9P2N5 1060 aaKnown RBP17.55■□□□□ 0.4
PTCH1-202ENST00000375271 ABCF2Q9UG63 623 aa17.55■□□□□ 0.4
PTCH1-202ENST00000375271 FBXO3Q9UK99 471 aa17.55■□□□□ 0.4
PTCH1-202ENST00000375271 PNMA3Q9UL41 463 aa17.55■□□□□ 0.4
PTCH1-202ENST00000375271 TRIOBPQ9H2D6 2365 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms