RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 A0A087WZG4 1122 aa12.83□□□□□ -0.36
CCDC40-203ENST00000374877 SPTLC2O15270 562 aa12.83□□□□□ -0.36
CCDC40-203ENST00000374877 HMGB2P26583 209 aaKnown RBP12.83□□□□□ -0.36
CCDC40-203ENST00000374877 RXRBP28702 533 aa12.83□□□□□ -0.36
CCDC40-203ENST00000374877 MNS1Q8NEH6 495 aa12.83□□□□□ -0.36
CCDC40-203ENST00000374877 UBXN4Q92575 508 aa12.83□□□□□ -0.36
CCDC40-203ENST00000374877 PAG1Q9NWQ8 432 aa12.83□□□□□ -0.36
CCDC40-203ENST00000374877 SH3TC1Q8TE82 1336 aa12.83□□□□□ -0.36
CCDC40-203ENST00000374877 BRWD3Q6RI45 1802 aa12.82□□□□□ -0.36
CCDC40-203ENST00000374877 A0A1W2PQ27 194 aa12.82□□□□□ -0.36
CCDC40-203ENST00000374877 A0A1W2PQ64 194 aa12.82□□□□□ -0.36
CCDC40-203ENST00000374877 A0A1W2PQD8 194 aa12.82□□□□□ -0.36
CCDC40-203ENST00000374877 H7C1W4 665 aa12.82□□□□□ -0.36
CCDC40-203ENST00000374877 FDPSP14324 419 aaKnown RBP12.82□□□□□ -0.36
CCDC40-203ENST00000374877 TTLL5Q6EMB2 1281 aa12.82□□□□□ -0.36
CCDC40-203ENST00000374877 PTF1AQ7RTS3 328 aa12.82□□□□□ -0.36
CCDC40-203ENST00000374877 KCNG4Q8TDN1 519 aa12.82□□□□□ -0.36
CCDC40-203ENST00000374877 RFX7Q2KHR2 1363 aa12.82□□□□□ -0.36
CCDC40-203ENST00000374877 ZNF202O95125 648 aa12.82□□□□□ -0.36
CCDC40-203ENST00000374877 HSPD1P10809 573 aaKnown RBP12.82□□□□□ -0.36
CCDC40-203ENST00000374877 CASP7P55210 303 aa12.82□□□□□ -0.36
CCDC40-203ENST00000374877 FAM182BQ5T319 152 aa12.82□□□□□ -0.36
CCDC40-203ENST00000374877 ZNF274Q96GC6 653 aaPredicted RBP12.82□□□□□ -0.36
CCDC40-203ENST00000374877 DSCC1Q9BVC3 393 aa12.82□□□□□ -0.36
CCDC40-203ENST00000374877 GJB4Q9NTQ9 266 aa12.82□□□□□ -0.36
CCDC40-203ENST00000374877 URI1O94763 535 aaPredicted RBP12.82□□□□□ -0.36
CCDC40-203ENST00000374877 ATP1A3P13637 1013 aa12.82□□□□□ -0.36
CCDC40-203ENST00000374877 NLRP12P59046 1061 aa12.82□□□□□ -0.36
CCDC40-203ENST00000374877 ETF1P62495 437 aaKnown RBP12.82□□□□□ -0.36
CCDC40-203ENST00000374877 FANCCQ00597 558 aa12.82□□□□□ -0.36
CCDC40-203ENST00000374877 SYNE3Q6ZMZ3 975 aa12.82□□□□□ -0.36
CCDC40-203ENST00000374877 LINC00116Q8NCU8 138 aa12.82□□□□□ -0.36
CCDC40-203ENST00000374877 BBXQ8WY36 941 aaPredicted RBP12.82□□□□□ -0.36
CCDC40-203ENST00000374877 TIGD1Q96MW7 591 aa12.82□□□□□ -0.36
CCDC40-203ENST00000374877 FHOD1Q9Y613 1164 aa12.82□□□□□ -0.36
CCDC40-203ENST00000374877 KAT6BQ8WYB5 2073 aa12.81□□□□□ -0.36
CCDC40-203ENST00000374877 AFDNP55196 1824 aaKnown RBP12.81□□□□□ -0.36
CCDC40-203ENST00000374877 PNMA6AP0CW24 399 aaPredicted RBP12.81□□□□□ -0.36
CCDC40-203ENST00000374877 HAND2P61296 217 aa12.81□□□□□ -0.36
CCDC40-203ENST00000374877 TIMM10P62072 90 aa12.81□□□□□ -0.36
CCDC40-203ENST00000374877 CCDC93Q567U6 631 aa12.81□□□□□ -0.36
CCDC40-203ENST00000374877 DZIP3Q86Y13 1208 aaKnown RBP12.81□□□□□ -0.36
CCDC40-203ENST00000374877 FAM177A1Q8N128 213 aaPredicted RBP12.81□□□□□ -0.36
CCDC40-203ENST00000374877 AGXT2Q9BYV1 514 aa12.81□□□□□ -0.36
CCDC40-203ENST00000374877 HELLSQ9NRZ9 838 aa12.81□□□□□ -0.36
CCDC40-203ENST00000374877 ARGLU1Q9NWB6 273 aaPredicted RBP12.81□□□□□ -0.36
CCDC40-203ENST00000374877 PTPN21Q16825 1174 aa12.81□□□□□ -0.36
CCDC40-203ENST00000374877 TMCO3Q6UWJ1 677 aa12.81□□□□□ -0.36
CCDC40-203ENST00000374877 LMBR1LQ6UX01 489 aa12.81□□□□□ -0.36
CCDC40-203ENST00000374877 SERPINC1P01008 464 aa12.8□□□□□ -0.36
CCDC40-203ENST00000374877 MARCKSP29966 332 aaPredicted RBP12.8□□□□□ -0.36
CCDC40-203ENST00000374877 BPIFA3Q9BQP9 254 aa12.8□□□□□ -0.36
CCDC40-203ENST00000374877 ORC3Q9UBD5 711 aaPredicted RBP12.8□□□□□ -0.36
CCDC40-203ENST00000374877 CCNL1Q9UK58 526 aaPredicted RBP12.8□□□□□ -0.36
CCDC40-203ENST00000374877 ZNF330Q9Y3S2 320 aaPredicted RBP12.8□□□□□ -0.36
CCDC40-203ENST00000374877 CPLX1O14810 134 aa12.8□□□□□ -0.36
CCDC40-203ENST00000374877 POLR3GO15318 223 aaPredicted RBP12.8□□□□□ -0.36
CCDC40-203ENST00000374877 CDK11BP21127 795 aaKnown RBP12.8□□□□□ -0.36
CCDC40-203ENST00000374877 CFAP100Q494V2 611 aa12.8□□□□□ -0.36
CCDC40-203ENST00000374877 MYSM1Q5VVJ2 828 aa12.8□□□□□ -0.36
CCDC40-203ENST00000374877 YEATS4O95619 227 aa12.8□□□□□ -0.36
CCDC40-203ENST00000374877 PFKFB1P16118 471 aa12.8□□□□□ -0.36
CCDC40-203ENST00000374877 GOLGA8FQ08AF8 430 aa12.8□□□□□ -0.36
CCDC40-203ENST00000374877 GOLGA8DPQ0D2H9 430 aa12.8□□□□□ -0.36
CCDC40-203ENST00000374877 NCAPHQ15003 741 aa12.8□□□□□ -0.36
CCDC40-203ENST00000374877 RABL6Q3YEC7 729 aaPredicted RBP12.8□□□□□ -0.36
CCDC40-203ENST00000374877 MYH15Q9Y2K3 1946 aa12.8□□□□□ -0.36
CCDC40-203ENST00000374877 MAST3O60307 1309 aa12.79□□□□□ -0.36
CCDC40-203ENST00000374877 GOLGA8BA8MQT2 603 aa12.79□□□□□ -0.36
CCDC40-203ENST00000374877 UBASH3AP57075 661 aa12.79□□□□□ -0.36
CCDC40-203ENST00000374877 ZMYM1Q5SVZ6 1142 aa12.79□□□□□ -0.36
CCDC40-203ENST00000374877 CHMP4CQ96CF2 233 aa12.79□□□□□ -0.36
CCDC40-203ENST00000374877 UTP14AQ9BVJ6 771 aaKnown RBP12.79□□□□□ -0.36
CCDC40-203ENST00000374877 CALCOCO1Q9P1Z2 691 aa12.79□□□□□ -0.36
CCDC40-203ENST00000374877 ANKRD36CQ5JPF3 1778 aa12.79□□□□□ -0.36
CCDC40-203ENST00000374877 KLF18A0A0U1RQI7 1052 aa12.79□□□□□ -0.36
CCDC40-203ENST00000374877 CCP110O43303 1012 aa12.79□□□□□ -0.36
CCDC40-203ENST00000374877 CARD6Q9BX69 1037 aa12.79□□□□□ -0.36
CCDC40-203ENST00000374877 POLR3EQ9NVU0 708 aa12.79□□□□□ -0.36
CCDC40-203ENST00000374877 NEDD4P46934 1319 aa12.79□□□□□ -0.36
CCDC40-203ENST00000374877 KCNJ6P48051 423 aa12.79□□□□□ -0.36
CCDC40-203ENST00000374877 SLC27A3Q5K4L6 730 aa12.79□□□□□ -0.36
CCDC40-203ENST00000374877 FBXO18Q8NFZ0 1043 aa12.79□□□□□ -0.36
CCDC40-203ENST00000374877 TRERF1Q96PN7 1200 aa12.79□□□□□ -0.36
CCDC40-203ENST00000374877 RGS17Q9UGC6 210 aaPredicted RBP12.79□□□□□ -0.36
CCDC40-203ENST00000374877 RPS6KA4O75676 772 aa12.78□□□□□ -0.36
CCDC40-203ENST00000374877 CAMTA2O94983 1202 aa12.78□□□□□ -0.36
CCDC40-203ENST00000374877 PCCAP05165 728 aaPredicted RBP12.78□□□□□ -0.36
CCDC40-203ENST00000374877 IFIT1P09914 478 aaKnown RBP12.78□□□□□ -0.36
CCDC40-203ENST00000374877 PLA2G4AP47712 749 aa12.78□□□□□ -0.36
CCDC40-203ENST00000374877 DHX8Q14562 1220 aaKnown RBP12.78□□□□□ -0.36
CCDC40-203ENST00000374877 DPF2Q92785 391 aa12.78□□□□□ -0.36
CCDC40-203ENST00000374877 SEC31AO94979 1220 aaKnown RBP12.78□□□□□ -0.36
CCDC40-203ENST00000374877 TUBB4AP04350 444 aa12.78□□□□□ -0.36
CCDC40-203ENST00000374877 ANO1Q5XXA6 986 aa12.78□□□□□ -0.36
CCDC40-203ENST00000374877 ZNF34Q8IZ26 560 aa12.78□□□□□ -0.36
CCDC40-203ENST00000374877 TMX1Q9H3N1 280 aa12.78□□□□□ -0.36
CCDC40-203ENST00000374877 MYH14Q7Z406 1995 aaKnown RBP12.78□□□□□ -0.36
CCDC40-203ENST00000374877 PHLPP2Q6ZVD8 1323 aa12.78□□□□□ -0.36
CCDC40-203ENST00000374877 CDHR2Q9BYE9 1310 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms