RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 FLIIQ13045 1269 aa11.5□□□□□ -0.57
CD28-202ENST00000374481 TAF11Q15544 211 aa11.5□□□□□ -0.57
CD28-202ENST00000374481 MUM1Q2TAK8 710 aa11.5□□□□□ -0.57
CD28-202ENST00000374481 RRAGBQ5VZM2 374 aa11.5□□□□□ -0.57
CD28-202ENST00000374481 E4F1Q66K89 784 aaPredicted RBP11.5□□□□□ -0.57
CD28-202ENST00000374481 LRRC45Q96CN5 670 aa11.5□□□□□ -0.57
CD28-202ENST00000374481 CARD14Q9BXL6 1004 aa11.5□□□□□ -0.57
CD28-202ENST00000374481 STMN4Q9H169 189 aaPredicted RBP11.5□□□□□ -0.57
CD28-202ENST00000374481 MEFVO15553 781 aaPredicted RBP11.5□□□□□ -0.57
CD28-202ENST00000374481 JAK2O60674 1132 aa11.5□□□□□ -0.57
CD28-202ENST00000374481 HDGFP51858 240 aaKnown RBP11.5□□□□□ -0.57
CD28-202ENST00000374481 CCZ1BP86790 482 aa11.5□□□□□ -0.57
CD28-202ENST00000374481 CCZ1P86791 482 aaPredicted RBP11.5□□□□□ -0.57
CD28-202ENST00000374481 UBXN1Q04323 297 aa11.5□□□□□ -0.57
CD28-202ENST00000374481 SWT1Q5T5J6 900 aaKnown RBP11.5□□□□□ -0.57
CD28-202ENST00000374481 ZBTB10Q96DT7 871 aa11.5□□□□□ -0.57
CD28-202ENST00000374481 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.5□□□□□ -0.57
CD28-202ENST00000374481 PAX7P23759 505 aa11.5□□□□□ -0.57
CD28-202ENST00000374481 DPCR1Q3MIW9 517 aa11.5□□□□□ -0.57
CD28-202ENST00000374481 THOC1Q96FV9 657 aaKnown RBP11.5□□□□□ -0.57
CD28-202ENST00000374481 CARD10Q9BWT7 1032 aa11.5□□□□□ -0.57
CD28-202ENST00000374481 CD248Q9HCU0 757 aa11.5□□□□□ -0.57
CD28-202ENST00000374481 SSH2Q76I76 1423 aa11.5□□□□□ -0.57
CD28-202ENST00000374481 FAM83GA6ND36 823 aa11.5□□□□□ -0.57
CD28-202ENST00000374481 PZPP20742 1482 aa11.5□□□□□ -0.57
CD28-202ENST00000374481 NUP153P49790 1475 aaKnown RBP11.5□□□□□ -0.57
CD28-202ENST00000374481 JAKMIP2Q96AA8 810 aa11.5□□□□□ -0.57
CD28-202ENST00000374481 TAOK3Q9H2K8 898 aa11.5□□□□□ -0.57
CD28-202ENST00000374481 FANCLQ9NW38 375 aa11.5□□□□□ -0.57
CD28-202ENST00000374481 ANKRD24Q8TF21 1146 aa11.49□□□□□ -0.57
CD28-202ENST00000374481 OSBPL9Q96SU4 736 aa11.49□□□□□ -0.57
CD28-202ENST00000374481 WWC3Q9ULE0 1092 aa11.49□□□□□ -0.57
CD28-202ENST00000374481 GSTTP1A0A1W2PQM5 241 aa11.49□□□□□ -0.57
CD28-202ENST00000374481 RPS6KB1P23443 525 aa11.49□□□□□ -0.57
CD28-202ENST00000374481 PRPF4BQ13523 1007 aaKnown RBP11.49□□□□□ -0.57
CD28-202ENST00000374481 LRRC31Q6UY01 552 aa11.49□□□□□ -0.57
CD28-202ENST00000374481 BRAPQ7Z569 592 aa11.49□□□□□ -0.57
CD28-202ENST00000374481 VSIG1Q86XK7 387 aa11.49□□□□□ -0.57
CD28-202ENST00000374481 STMN2Q93045 179 aa11.49□□□□□ -0.57
CD28-202ENST00000374481 USP28Q96RU2 1077 aa11.49□□□□□ -0.57
CD28-202ENST00000374481 PSMB7Q99436 277 aa11.49□□□□□ -0.57
CD28-202ENST00000374481 TM6SF1Q9BZW5 370 aa11.49□□□□□ -0.57
CD28-202ENST00000374481 KIF9Q9HAQ2 790 aa11.49□□□□□ -0.57
CD28-202ENST00000374481 A0A0G2JS52 829 aa11.49□□□□□ -0.57
CD28-202ENST00000374481 MYO1FO00160 1098 aa11.49□□□□□ -0.57
CD28-202ENST00000374481 CUTAO60888 179 aa11.49□□□□□ -0.57
CD28-202ENST00000374481 GGCXP38435 758 aa11.49□□□□□ -0.57
CD28-202ENST00000374481 APBA1Q02410 837 aa11.49□□□□□ -0.57
CD28-202ENST00000374481 ZFYVE27Q5T4F4 411 aa11.49□□□□□ -0.57
CD28-202ENST00000374481 CCHCR1Q8TD31 782 aa11.49□□□□□ -0.57
CD28-202ENST00000374481 FAM184BQ9ULE4 1060 aa11.49□□□□□ -0.57
CD28-202ENST00000374481 RAPGEF6Q8TEU7 1601 aa11.49□□□□□ -0.57
CD28-202ENST00000374481 GUCY2FP51841 1108 aa11.48□□□□□ -0.57
CD28-202ENST00000374481 NMIQ13287 307 aaPredicted RBP11.48□□□□□ -0.57
CD28-202ENST00000374481 ADALQ6DHV7 355 aa11.48□□□□□ -0.57
CD28-202ENST00000374481 RNF217Q8TC41 542 aa11.48□□□□□ -0.57
CD28-202ENST00000374481 TRIM47Q96LD4 638 aa11.48□□□□□ -0.57
CD28-202ENST00000374481 FUT8Q9BYC5 575 aa11.48□□□□□ -0.57
CD28-202ENST00000374481 PTPN21Q16825 1174 aa11.48□□□□□ -0.57
CD28-202ENST00000374481 KRT71Q3SY84 523 aa11.48□□□□□ -0.57
CD28-202ENST00000374481 TTC39AQ5SRH9 613 aa11.48□□□□□ -0.57
CD28-202ENST00000374481 DZIP1Q86YF9 867 aaKnown RBP11.48□□□□□ -0.57
CD28-202ENST00000374481 MLKLQ8NB16 471 aa11.48□□□□□ -0.57
CD28-202ENST00000374481 TRIM58Q8NG06 486 aa11.48□□□□□ -0.57
CD28-202ENST00000374481 GPATCH8Q9UKJ3 1502 aaKnown RBP11.48□□□□□ -0.57
CD28-202ENST00000374481 NNTQ13423 1086 aa11.48□□□□□ -0.57
CD28-202ENST00000374481 DIXDC1Q155Q3 683 aa11.48□□□□□ -0.57
CD28-202ENST00000374481 EGFL6Q8IUX8 553 aa11.48□□□□□ -0.57
CD28-202ENST00000374481 USH1CQ9Y6N9 552 aa11.48□□□□□ -0.57
CD28-202ENST00000374481 PLB1Q6P1J6 1458 aa11.48□□□□□ -0.57
CD28-202ENST00000374481 NBPF7P0C2Y1 421 aaPredicted RBP11.48□□□□□ -0.57
CD28-202ENST00000374481 MMP14P50281 582 aa11.48□□□□□ -0.57
CD28-202ENST00000374481 TRIM14Q14142 442 aa11.48□□□□□ -0.57
CD28-202ENST00000374481 SELENOOQ9BVL4 669 aa11.48□□□□□ -0.57
CD28-202ENST00000374481 VPS16Q9H269 839 aa11.48□□□□□ -0.57
CD28-202ENST00000374481 ZNF446Q9NWS9 450 aa11.48□□□□□ -0.57
CD28-202ENST00000374481 NAA16Q6N069 864 aaPredicted RBP11.47□□□□□ -0.57
CD28-202ENST00000374481 TRMT44Q8IYL2 757 aaKnown RBP11.47□□□□□ -0.57
CD28-202ENST00000374481 CABP1Q9NZU7 370 aa11.47□□□□□ -0.57
CD28-202ENST00000374481 ADAMTS12P58397 1594 aa11.47□□□□□ -0.57
CD28-202ENST00000374481 IARSP41252 1262 aaKnown RBP11.47□□□□□ -0.57
CD28-202ENST00000374481 KIAA0753Q2KHM9 967 aa11.47□□□□□ -0.57
CD28-202ENST00000374481 NBPF14Q5TI25 921 aa11.47□□□□□ -0.57
CD28-202ENST00000374481 CCDC197Q8NCU1 140 aa11.47□□□□□ -0.57
CD28-202ENST00000374481 MIEF2Q96C03 454 aa11.47□□□□□ -0.57
CD28-202ENST00000374481 FAM167BQ9BTA0 163 aa11.47□□□□□ -0.57
CD28-202ENST00000374481 TSGA10Q9BZW7 698 aa11.47□□□□□ -0.57
CD28-202ENST00000374481 ZRANB1Q9UGI0 708 aa11.47□□□□□ -0.57
CD28-202ENST00000374481 TPCN1Q9ULQ1 816 aa11.47□□□□□ -0.57
CD28-202ENST00000374481 G3BP2Q9UN86 482 aaKnown RBP11.47□□□□□ -0.57
CD28-202ENST00000374481 TRIM35Q9UPQ4 493 aa11.47□□□□□ -0.57
CD28-202ENST00000374481 DENND4BO75064 1496 aaPredicted RBP11.47□□□□□ -0.57
CD28-202ENST00000374481 KLF18A0A0U1RQI7 1052 aa11.47□□□□□ -0.57
CD28-202ENST00000374481 N4BP1O75113 896 aaKnown RBP11.47□□□□□ -0.57
CD28-202ENST00000374481 CAND2O75155 1236 aa11.47□□□□□ -0.57
CD28-202ENST00000374481 SNUPNO95149 360 aaKnown RBP11.47□□□□□ -0.57
CD28-202ENST00000374481 DESP17661 470 aa11.47□□□□□ -0.57
CD28-202ENST00000374481 RASEFQ8IZ41 740 aa11.47□□□□□ -0.57
CD28-202ENST00000374481 CCDC51Q96ER9 411 aa11.47□□□□□ -0.57
CD28-202ENST00000374481 ALG1Q9BT22 464 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms