RNA–Protein interactions for RNA: ENST00000373159.1

TRAPPC3-201, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-201ENST00000373159 ZNF341Q9BYN7 854 aa16.39■□□□□ 0.21
TRAPPC3-201ENST00000373159 BRCA2P51587 3418 aa16.39■□□□□ 0.21
TRAPPC3-201ENST00000373159 SLC5A1P13866 664 aa16.38■□□□□ 0.21
TRAPPC3-201ENST00000373159 LACTBP83111 547 aaPredicted RBP16.38■□□□□ 0.21
TRAPPC3-201ENST00000373159 KIF22Q14807 665 aa16.38■□□□□ 0.21
TRAPPC3-201ENST00000373159 ZNF112Q9UJU3 913 aa16.38■□□□□ 0.21
TRAPPC3-201ENST00000373159 OTOFQ9HC10 1997 aa16.38■□□□□ 0.21
TRAPPC3-201ENST00000373159 RPAP1Q9BWH6 1393 aaPredicted RBP16.38■□□□□ 0.21
TRAPPC3-201ENST00000373159 CEP290O15078 2479 aa16.37■□□□□ 0.21
TRAPPC3-201ENST00000373159 E9PSI1 815 aa16.37■□□□□ 0.21
TRAPPC3-201ENST00000373159 PRMT2P55345 433 aa16.37■□□□□ 0.21
TRAPPC3-201ENST00000373159 C17orf99Q6UX52 265 aa16.37■□□□□ 0.21
TRAPPC3-201ENST00000373159 MIGA2Q7L4E1 593 aa16.37■□□□□ 0.21
TRAPPC3-201ENST00000373159 ATG9AQ7Z3C6 839 aa16.37■□□□□ 0.21
TRAPPC3-201ENST00000373159 ARHGAP39Q9C0H5 1083 aa16.37■□□□□ 0.21
TRAPPC3-201ENST00000373159 INPP5BP32019 993 aa16.36■□□□□ 0.21
TRAPPC3-201ENST00000373159 SLC4A8Q2Y0W8 1093 aa16.36■□□□□ 0.21
TRAPPC3-201ENST00000373159 CDC42EP5Q6NZY7 148 aa16.36■□□□□ 0.21
TRAPPC3-201ENST00000373159 ANKRD23Q86SG2 305 aa16.36■□□□□ 0.21
TRAPPC3-201ENST00000373159 FBXO3Q9UK99 471 aa16.36■□□□□ 0.21
TRAPPC3-201ENST00000373159 KCNH4Q9UQ05 1017 aa16.36■□□□□ 0.21
TRAPPC3-201ENST00000373159 ARAP2Q8WZ64 1704 aa16.36■□□□□ 0.21
TRAPPC3-201ENST00000373159 DAGLAQ9Y4D2 1042 aa16.35■□□□□ 0.21
TRAPPC3-201ENST00000373159 RBBP6Q7Z6E9 1792 aaKnown RBP16.34■□□□□ 0.21
TRAPPC3-201ENST00000373159 CIAO1O76071 339 aa16.34■□□□□ 0.21
TRAPPC3-201ENST00000373159 ZEB1P37275 1124 aaPredicted RBP16.34■□□□□ 0.21
TRAPPC3-201ENST00000373159 SLFN5Q08AF3 891 aa16.34■□□□□ 0.21
TRAPPC3-201ENST00000373159 ALDH1L2Q3SY69 923 aa16.34■□□□□ 0.21
TRAPPC3-201ENST00000373159 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.34■□□□□ 0.21
TRAPPC3-201ENST00000373159 SH3TC2Q8TF17 1288 aa16.34■□□□□ 0.21
TRAPPC3-201ENST00000373159 GNL3LQ9NVN8 582 aaKnown RBP16.34■□□□□ 0.21
TRAPPC3-201ENST00000373159 PDHXO00330 501 aa16.33■□□□□ 0.2
TRAPPC3-201ENST00000373159 ZBTB22O15209 634 aa16.33■□□□□ 0.2
TRAPPC3-201ENST00000373159 TCP10Q12799 353 aa16.33■□□□□ 0.2
TRAPPC3-201ENST00000373159 NFIAQ12857 509 aa16.33■□□□□ 0.2
TRAPPC3-201ENST00000373159 MOGSQ13724 837 aa16.33■□□□□ 0.2
TRAPPC3-201ENST00000373159 DIXDC1Q155Q3 683 aa16.33■□□□□ 0.2
TRAPPC3-201ENST00000373159 NOL9Q5SY16 702 aaKnown RBP16.33■□□□□ 0.2
TRAPPC3-201ENST00000373159 USP40Q9NVE5 1235 aa16.33■□□□□ 0.2
TRAPPC3-201ENST00000373159 CEP126Q9P2H0 1117 aa16.33■□□□□ 0.2
TRAPPC3-201ENST00000373159 CPA4Q9UI42 421 aa16.33■□□□□ 0.2
TRAPPC3-201ENST00000373159 SEMA3EO15041 775 aa16.32■□□□□ 0.2
TRAPPC3-201ENST00000373159 LDHBP07195 334 aaKnown RBP16.32■□□□□ 0.2
TRAPPC3-201ENST00000373159 HOXD10P28358 340 aa16.32■□□□□ 0.2
TRAPPC3-201ENST00000373159 PRDX5P30044 214 aa16.32■□□□□ 0.2
TRAPPC3-201ENST00000373159 PSMC4P43686 418 aa16.32■□□□□ 0.2
TRAPPC3-201ENST00000373159 ATP2B3Q16720 1220 aa16.32■□□□□ 0.2
TRAPPC3-201ENST00000373159 SALL1Q9NSC2 1324 aa16.32■□□□□ 0.2
TRAPPC3-201ENST00000373159 FAM198AQ9UFP1 575 aa16.32■□□□□ 0.2
TRAPPC3-201ENST00000373159 SRRDQ9UH36 339 aa16.32■□□□□ 0.2
TRAPPC3-201ENST00000373159 ADGRA2Q96PE1 1338 aa16.31■□□□□ 0.2
TRAPPC3-201ENST00000373159 CXCL11O14625 94 aa16.31■□□□□ 0.2
TRAPPC3-201ENST00000373159 MYCP01106 439 aaPredicted RBP16.31■□□□□ 0.2
TRAPPC3-201ENST00000373159 UBTFL1P0CB47 393 aaPredicted RBP16.31■□□□□ 0.2
TRAPPC3-201ENST00000373159 CTGFP29279 349 aa16.31■□□□□ 0.2
TRAPPC3-201ENST00000373159 TRIM47Q96LD4 638 aa16.31■□□□□ 0.2
TRAPPC3-201ENST00000373159 DENND2AQ9ULE3 1009 aa16.31■□□□□ 0.2
TRAPPC3-201ENST00000373159 IL15P40933 162 aaPredicted RBP16.3■□□□□ 0.2
TRAPPC3-201ENST00000373159 ZFPM1Q8IX07 1006 aa16.3■□□□□ 0.2
TRAPPC3-201ENST00000373159 SIL1Q9H173 461 aa16.3■□□□□ 0.2
TRAPPC3-201ENST00000373159 HDAC5Q9UQL6 1122 aa16.3■□□□□ 0.2
TRAPPC3-201ENST00000373159 PHF20L1A8MW92 1017 aa16.29■□□□□ 0.2
TRAPPC3-201ENST00000373159 FMNL1O95466 1100 aaPredicted RBP16.29■□□□□ 0.2
TRAPPC3-201ENST00000373159 OSBPP22059 807 aa16.29■□□□□ 0.2
TRAPPC3-201ENST00000373159 FXR1P51114 621 aaKnown RBP eCLIP16.29■□□□□ 0.2
TRAPPC3-201ENST00000373159 MAP3K10Q02779 954 aa16.29■□□□□ 0.2
TRAPPC3-201ENST00000373159 MTFR1Q15390 333 aa16.29■□□□□ 0.2
TRAPPC3-201ENST00000373159 GPAT2Q6NUI2 795 aa16.29■□□□□ 0.2
TRAPPC3-201ENST00000373159 IDI2Q9BXS1 227 aa16.29■□□□□ 0.2
TRAPPC3-201ENST00000373159 SMC4Q9NTJ3 1288 aa16.29■□□□□ 0.2
TRAPPC3-201ENST00000373159 COLQQ9Y215 455 aaPredicted RBP16.29■□□□□ 0.2
TRAPPC3-201ENST00000373159 TRIOBPQ9H2D6 2365 aa16.29■□□□□ 0.2
TRAPPC3-201ENST00000373159 ENTPD3O75355 529 aa16.28■□□□□ 0.2
TRAPPC3-201ENST00000373159 BCRP11274 1271 aa16.28■□□□□ 0.2
TRAPPC3-201ENST00000373159 GRK4P32298 578 aa16.28■□□□□ 0.2
TRAPPC3-201ENST00000373159 PHKA1P46020 1223 aa16.28■□□□□ 0.2
TRAPPC3-201ENST00000373159 TRMT2AQ8IZ69 625 aaKnown RBP16.28■□□□□ 0.2
TRAPPC3-201ENST00000373159 ZGPATQ8N5A5 531 aaKnown RBP16.28■□□□□ 0.2
TRAPPC3-201ENST00000373159 NKX2-3Q8TAU0 364 aa16.28■□□□□ 0.2
TRAPPC3-201ENST00000373159 RAET1EQ8TD07 263 aa16.28■□□□□ 0.2
TRAPPC3-201ENST00000373159 FAM163AQ96GL9 167 aaPredicted RBP16.28■□□□□ 0.2
TRAPPC3-201ENST00000373159 PARK7Q99497 189 aaKnown RBP16.28■□□□□ 0.2
TRAPPC3-201ENST00000373159 COPRSQ9NQ92 184 aa16.28■□□□□ 0.2
TRAPPC3-201ENST00000373159 H0YGN5 161 aa16.27■□□□□ 0.2
TRAPPC3-201ENST00000373159 ECM2O94769 699 aaPredicted RBP16.27■□□□□ 0.2
TRAPPC3-201ENST00000373159 RGS3P49796 1198 aa16.27■□□□□ 0.2
TRAPPC3-201ENST00000373159 CCDC102BQ68D86 513 aa16.27■□□□□ 0.2
TRAPPC3-201ENST00000373159 FASTKD5Q7L8L6 764 aaKnown RBP16.27■□□□□ 0.2
TRAPPC3-201ENST00000373159 SCYL3Q8IZE3 742 aa16.27■□□□□ 0.2
TRAPPC3-201ENST00000373159 CDCA7LQ96GN5 454 aa16.27■□□□□ 0.2
TRAPPC3-201ENST00000373159 ZHX2Q9Y6X8 837 aa16.27■□□□□ 0.2
TRAPPC3-201ENST00000373159 ATRNL1Q5VV63 1379 aa16.26■□□□□ 0.19
TRAPPC3-201ENST00000373159 GAKO14976 1311 aa16.26■□□□□ 0.19
TRAPPC3-201ENST00000373159 GJB1P08034 283 aa16.26■□□□□ 0.19
TRAPPC3-201ENST00000373159 CT47B1P0C2W7 299 aaPredicted RBP16.26■□□□□ 0.19
TRAPPC3-201ENST00000373159 CYP2C8P10632 490 aa16.26■□□□□ 0.19
TRAPPC3-201ENST00000373159 PTPRAP18433 802 aa16.26■□□□□ 0.19
TRAPPC3-201ENST00000373159 SH3BP5LQ7L8J4 393 aa16.26■□□□□ 0.19
TRAPPC3-201ENST00000373159 SHISA4Q96DD7 197 aa16.26■□□□□ 0.19
TRAPPC3-201ENST00000373159 PICK1Q9NRD5 415 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms