RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 DNAJC25Q9H1X3 360 aa21.86■■□□□ 1.09
USP49-202ENST00000373010 LY9Q9HBG7 655 aa21.86■■□□□ 1.09
USP49-202ENST00000373010 SLC4A4Q9Y6R1 1079 aa21.86■■□□□ 1.09
USP49-202ENST00000373010 CASZ1Q86V15 1759 aa21.85■■□□□ 1.09
USP49-202ENST00000373010 GYG1P46976 350 aa21.85■■□□□ 1.09
USP49-202ENST00000373010 TMEM67Q5HYA8 995 aa21.85■■□□□ 1.09
USP49-202ENST00000373010 ZSWIM5Q9P217 1185 aa21.85■■□□□ 1.09
USP49-202ENST00000373010 ANKRD18AQ8IVF6 992 aa21.85■■□□□ 1.09
USP49-202ENST00000373010 ENGASEQ8NFI3 743 aa21.85■■□□□ 1.09
USP49-202ENST00000373010 PHKBQ93100 1093 aa21.85■■□□□ 1.09
USP49-202ENST00000373010 STK11IPQ8N1F8 1099 aa21.84■■□□□ 1.09
USP49-202ENST00000373010 TDO2P48775 406 aa21.84■■□□□ 1.09
USP49-202ENST00000373010 KIF23Q02241 960 aaPredicted RBP21.84■■□□□ 1.09
USP49-202ENST00000373010 MYSM1Q5VVJ2 828 aa21.84■■□□□ 1.09
USP49-202ENST00000373010 SPC24Q8NBT2 197 aa21.84■■□□□ 1.09
USP49-202ENST00000373010 LINC00301Q8NCQ3 95 aa21.84■■□□□ 1.09
USP49-202ENST00000373010 C8orf37Q96NL8 207 aa21.84■■□□□ 1.09
USP49-202ENST00000373010 ALG1Q9BT22 464 aa21.84■■□□□ 1.09
USP49-202ENST00000373010 A0A1B0GUL6 1792 aa21.83■■□□□ 1.09
USP49-202ENST00000373010 ZBTB43O43298 467 aa21.83■■□□□ 1.09
USP49-202ENST00000373010 FAM160A1Q05DH4 1040 aa21.83■■□□□ 1.09
USP49-202ENST00000373010 STK38Q15208 465 aa21.83■■□□□ 1.09
USP49-202ENST00000373010 AKNAD1Q5T1N1 836 aa21.83■■□□□ 1.09
USP49-202ENST00000373010 ADGRA1Q86SQ6 560 aa21.83■■□□□ 1.09
USP49-202ENST00000373010 PNPLA7Q6ZV29 1317 aa21.83■■□□□ 1.08
USP49-202ENST00000373010 IFIT3O14879 490 aaKnown RBP21.82■■□□□ 1.08
USP49-202ENST00000373010 ZNF165P49910 485 aa21.82■■□□□ 1.08
USP49-202ENST00000373010 RRP12Q5JTH9 1297 aaKnown RBP21.82■■□□□ 1.08
USP49-202ENST00000373010 TBC1D9BQ66K14 1250 aa21.82■■□□□ 1.08
USP49-202ENST00000373010 ABCF2Q9UG63 623 aa21.82■■□□□ 1.08
USP49-202ENST00000373010 ECM29Q5VYK3 1845 aa21.82■■□□□ 1.08
USP49-202ENST00000373010 GOLGA8AA7E2F4 631 aa21.82■■□□□ 1.08
USP49-202ENST00000373010 CYP7A1P22680 504 aa21.82■■□□□ 1.08
USP49-202ENST00000373010 KIAA2012Q0VF49 1180 aa21.82■■□□□ 1.08
USP49-202ENST00000373010 SF3B3Q15393 1217 aaKnown RBP21.82■■□□□ 1.08
USP49-202ENST00000373010 MFSD6Q6ZSS7 791 aa21.82■■□□□ 1.08
USP49-202ENST00000373010 BRAPQ7Z569 592 aa21.82■■□□□ 1.08
USP49-202ENST00000373010 SGMS1Q86VZ5 419 aa21.82■■□□□ 1.08
USP49-202ENST00000373010 FAM217BQ9NTX9 383 aaPredicted RBP21.82■■□□□ 1.08
USP49-202ENST00000373010 TIAM2Q8IVF5 1701 aa21.82■■□□□ 1.08
USP49-202ENST00000373010 KINO60870 393 aaKnown RBP21.81■■□□□ 1.08
USP49-202ENST00000373010 NGLY1Q96IV0 654 aa21.81■■□□□ 1.08
USP49-202ENST00000373010 BCL2L12Q9HB09 334 aa21.81■■□□□ 1.08
USP49-202ENST00000373010 TOMM22Q9NS69 142 aa21.81■■□□□ 1.08
USP49-202ENST00000373010 ZNF804BA4D1E1 1349 aa21.81■■□□□ 1.08
USP49-202ENST00000373010 A0A1B0GVL5 298 aa21.81■■□□□ 1.08
USP49-202ENST00000373010 CDKL5O76039 1030 aa21.81■■□□□ 1.08
USP49-202ENST00000373010 GNAT2P19087 354 aa21.81■■□□□ 1.08
USP49-202ENST00000373010 GTF2E1P29083 439 aaPredicted RBP21.81■■□□□ 1.08
USP49-202ENST00000373010 SF3A1Q15459 793 aaKnown RBP21.81■■□□□ 1.08
USP49-202ENST00000373010 ADALQ6DHV7 355 aa21.81■■□□□ 1.08
USP49-202ENST00000373010 MRPS27Q92552 414 aaKnown RBP21.81■■□□□ 1.08
USP49-202ENST00000373010 ZKSCAN3Q9BRR0 538 aa21.81■■□□□ 1.08
USP49-202ENST00000373010 NACAP1Q9BZK3 213 aa21.81■■□□□ 1.08
USP49-202ENST00000373010 POLR3EQ9NVU0 708 aa21.81■■□□□ 1.08
USP49-202ENST00000373010 ZNF831Q5JPB2 1677 aa21.81■■□□□ 1.08
USP49-202ENST00000373010 COL1A1P02452 1464 aaPredicted RBP21.81■■□□□ 1.08
USP49-202ENST00000373010 A0A087WWV3 80 aa21.8■■□□□ 1.08
USP49-202ENST00000373010 UBE2Q2LH0YL09 131 aa21.8■■□□□ 1.08
USP49-202ENST00000373010 CTAGE5O15320 804 aa21.8■■□□□ 1.08
USP49-202ENST00000373010 RANBP6O60518 1105 aaKnown RBP21.8■■□□□ 1.08
USP49-202ENST00000373010 TOM1O60784 492 aa21.8■■□□□ 1.08
USP49-202ENST00000373010 NTRK3Q16288 839 aa21.8■■□□□ 1.08
USP49-202ENST00000373010 CELF1Q92879 486 aaKnown RBP21.8■■□□□ 1.08
USP49-202ENST00000373010 KRT40Q6A162 431 aa21.8■■□□□ 1.08
USP49-202ENST00000373010 C11orf57Q6ZUT1 292 aaPredicted RBP21.8■■□□□ 1.08
USP49-202ENST00000373010 TDRD7Q8NHU6 1098 aaKnown RBP21.8■■□□□ 1.08
USP49-202ENST00000373010 ERCC4Q92889 916 aaPredicted RBP21.8■■□□□ 1.08
USP49-202ENST00000373010 KRT23Q9C075 422 aa21.8■■□□□ 1.08
USP49-202ENST00000373010 CNNM2Q9H8M5 875 aa21.8■■□□□ 1.08
USP49-202ENST00000373010 BSDC1Q9NW68 430 aaPredicted RBP21.8■■□□□ 1.08
USP49-202ENST00000373010 RAI14Q9P0K7 980 aa21.8■■□□□ 1.08
USP49-202ENST00000373010 SRP68Q9UHB9 627 aaKnown RBP21.8■■□□□ 1.08
USP49-202ENST00000373010 MINPP1Q9UNW1 487 aa21.8■■□□□ 1.08
USP49-202ENST00000373010 R3HCC1Q9Y3T6 440 aaKnown RBP21.8■■□□□ 1.08
USP49-202ENST00000373010 SPTLC2O15270 562 aa21.79■■□□□ 1.08
USP49-202ENST00000373010 YEATS4O95619 227 aa21.79■■□□□ 1.08
USP49-202ENST00000373010 LIFRP42702 1097 aa21.79■■□□□ 1.08
USP49-202ENST00000373010 CPLX2Q6PUV4 134 aaKnown RBP21.79■■□□□ 1.08
USP49-202ENST00000373010 SYNE3Q6ZMZ3 975 aa21.79■■□□□ 1.08
USP49-202ENST00000373010 FMR1NBQ8N0W7 255 aaPredicted RBP21.79■■□□□ 1.08
USP49-202ENST00000373010 STAG1Q8WVM7 1258 aa21.79■■□□□ 1.08
USP49-202ENST00000373010 SLC12A7Q9Y666 1083 aa21.79■■□□□ 1.08
USP49-202ENST00000373010 CNTNAP4Q9C0A0 1308 aa21.79■■□□□ 1.08
USP49-202ENST00000373010 CCDC69A6NI79 296 aa21.79■■□□□ 1.08
USP49-202ENST00000373010 UBE4AQ14139 1066 aa21.79■■□□□ 1.08
USP49-202ENST00000373010 C17orf53Q8N3J3 647 aaPredicted RBP21.79■■□□□ 1.08
USP49-202ENST00000373010 KCNG4Q8TDN1 519 aa21.79■■□□□ 1.08
USP49-202ENST00000373010 SDR42E1Q8WUS8 393 aa21.79■■□□□ 1.08
USP49-202ENST00000373010 IARSP41252 1262 aaKnown RBP21.78■■□□□ 1.08
USP49-202ENST00000373010 NDUFA8P51970 172 aa21.78■■□□□ 1.08
USP49-202ENST00000373010 VPS72Q15906 364 aa21.78■■□□□ 1.08
USP49-202ENST00000373010 ANO1Q5XXA6 986 aa21.78■■□□□ 1.08
USP49-202ENST00000373010 GNL3LQ9NVN8 582 aaKnown RBP21.78■■□□□ 1.08
USP49-202ENST00000373010 SCN7AQ01118 1682 aa21.78■■□□□ 1.08
USP49-202ENST00000373010 A0A1W2PQ27 194 aa21.78■■□□□ 1.08
USP49-202ENST00000373010 A0A1W2PQ64 194 aa21.78■■□□□ 1.08
USP49-202ENST00000373010 A0A1W2PQD8 194 aa21.78■■□□□ 1.08
USP49-202ENST00000373010 CCDC24Q8N4L8 307 aa21.78■■□□□ 1.08
USP49-202ENST00000373010 VPS37DQ86XT2 251 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms