RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 CCDC85AQ96PX6 553 aaPredicted RBP6.27□□□□□ -1.41
ATG4A-204ENST00000372246 POLD4Q9HCU8 107 aa6.27□□□□□ -1.41
ATG4A-204ENST00000372246 FANCLQ9NW38 375 aa6.27□□□□□ -1.41
ATG4A-204ENST00000372246 VPS18Q9P253 973 aa6.27□□□□□ -1.41
ATG4A-204ENST00000372246 KIAA1468Q9P260 1216 aa6.27□□□□□ -1.41
ATG4A-204ENST00000372246 OVOS2A0A0J9YW53 1432 aa6.27□□□□□ -1.41
ATG4A-204ENST00000372246 CLSTN1O94985 981 aa6.27□□□□□ -1.41
ATG4A-204ENST00000372246 IGKV5-2P06315 115 aa6.27□□□□□ -1.41
ATG4A-204ENST00000372246 RHOXF2BP0C7M4 288 aa6.27□□□□□ -1.41
ATG4A-204ENST00000372246 CASP1P29466 404 aa6.27□□□□□ -1.41
ATG4A-204ENST00000372246 OVOS2Q6IE36 1432 aa6.27□□□□□ -1.41
ATG4A-204ENST00000372246 NEUROD6Q96NK8 337 aa6.27□□□□□ -1.41
ATG4A-204ENST00000372246 RHOXF2Q9BQY4 288 aa6.27□□□□□ -1.41
ATG4A-204ENST00000372246 PDE11AQ9HCR9 933 aa6.27□□□□□ -1.41
ATG4A-204ENST00000372246 INCENPQ9NQS7 918 aa6.27□□□□□ -1.41
ATG4A-204ENST00000372246 CFAP45Q9UL16 551 aa6.27□□□□□ -1.41
ATG4A-204ENST00000372246 TFR2Q9UP52 801 aa6.27□□□□□ -1.41
ATG4A-204ENST00000372246 MED23Q9ULK4 1368 aa6.26□□□□□ -1.41
ATG4A-204ENST00000372246 MLH3Q9UHC1 1453 aa6.26□□□□□ -1.41
ATG4A-204ENST00000372246 ZNF202O95125 648 aa6.26□□□□□ -1.41
ATG4A-204ENST00000372246 A1BGP04217 495 aa6.26□□□□□ -1.41
ATG4A-204ENST00000372246 PFKFB1P16118 471 aa6.26□□□□□ -1.41
ATG4A-204ENST00000372246 UBASH3AP57075 661 aa6.26□□□□□ -1.41
ATG4A-204ENST00000372246 GRIN1Q05586 938 aa6.26□□□□□ -1.41
ATG4A-204ENST00000372246 STK38Q15208 465 aa6.26□□□□□ -1.41
ATG4A-204ENST00000372246 ZRSR1Q15695 479 aaKnown RBP6.26□□□□□ -1.41
ATG4A-204ENST00000372246 TSR1Q2NL82 804 aaKnown RBP6.26□□□□□ -1.41
ATG4A-204ENST00000372246 PROX2Q3B8N5 592 aa6.26□□□□□ -1.41
ATG4A-204ENST00000372246 FKBP15Q5T1M5 1219 aa6.26□□□□□ -1.41
ATG4A-204ENST00000372246 RNF20Q5VTR2 975 aa6.26□□□□□ -1.41
ATG4A-204ENST00000372246 GPIHBP1Q8IV16 184 aa6.26□□□□□ -1.41
ATG4A-204ENST00000372246 FOXP4Q8IVH2 680 aaPredicted RBP6.26□□□□□ -1.41
ATG4A-204ENST00000372246 MRPS27Q92552 414 aaKnown RBP6.26□□□□□ -1.41
ATG4A-204ENST00000372246 PNKPQ96T60 521 aa6.26□□□□□ -1.41
ATG4A-204ENST00000372246 OSBPL5Q9H0X9 879 aaPredicted RBP6.26□□□□□ -1.41
ATG4A-204ENST00000372246 MRPL44Q9H9J2 332 aaKnown RBP6.26□□□□□ -1.41
ATG4A-204ENST00000372246 SENP2Q9HC62 589 aa6.26□□□□□ -1.41
ATG4A-204ENST00000372246 ADAM21Q9UKJ8 722 aa6.26□□□□□ -1.41
ATG4A-204ENST00000372246 USP42Q9H9J4 1324 aaKnown RBP6.26□□□□□ -1.41
ATG4A-204ENST00000372246 SOWAHDA6NJG2 315 aa6.26□□□□□ -1.41
ATG4A-204ENST00000372246 GRM8O00222 908 aa6.26□□□□□ -1.41
ATG4A-204ENST00000372246 SLC3A2P08195 630 aaKnown RBP6.26□□□□□ -1.41
ATG4A-204ENST00000372246 ATP2B1P20020 1258 aa6.26□□□□□ -1.41
ATG4A-204ENST00000372246 BMP6P22004 513 aa6.26□□□□□ -1.41
ATG4A-204ENST00000372246 OSBPP22059 807 aa6.26□□□□□ -1.41
ATG4A-204ENST00000372246 PDIA3P30101 505 aaKnown RBP6.26□□□□□ -1.41
ATG4A-204ENST00000372246 CEBPAP49715 358 aaPredicted RBP6.26□□□□□ -1.41
ATG4A-204ENST00000372246 PPP2R3AQ06190 1150 aa6.26□□□□□ -1.41
ATG4A-204ENST00000372246 PI16Q6UXB8 463 aa6.26□□□□□ -1.41
ATG4A-204ENST00000372246 ABTB2Q8N961 1025 aa6.26□□□□□ -1.41
ATG4A-204ENST00000372246 RIN2Q8WYP3 895 aaPredicted RBP6.26□□□□□ -1.41
ATG4A-204ENST00000372246 GPATCH3Q96I76 525 aa6.26□□□□□ -1.41
ATG4A-204ENST00000372246 MYD88Q99836 296 aa6.26□□□□□ -1.41
ATG4A-204ENST00000372246 MYL10Q9BUA6 226 aa6.26□□□□□ -1.41
ATG4A-204ENST00000372246 FUT8Q9BYC5 575 aa6.26□□□□□ -1.41
ATG4A-204ENST00000372246 SEC31BQ9NQW1 1179 aa6.26□□□□□ -1.41
ATG4A-204ENST00000372246 PPP2R2CQ9Y2T4 447 aa6.26□□□□□ -1.41
ATG4A-204ENST00000372246 GOLGB1Q14789 3259 aaKnown RBP6.26□□□□□ -1.41
ATG4A-204ENST00000372246 A2ML1A8K2U0 1454 aa6.25□□□□□ -1.41
ATG4A-204ENST00000372246 USP6P35125 1406 aa6.25□□□□□ -1.41
ATG4A-204ENST00000372246 ZMYND10O75800 440 aa6.25□□□□□ -1.41
ATG4A-204ENST00000372246 LTKP29376 864 aa6.25□□□□□ -1.41
ATG4A-204ENST00000372246 MRPS25P82663 173 aaKnown RBP6.25□□□□□ -1.41
ATG4A-204ENST00000372246 ANKRD1Q15327 319 aa6.25□□□□□ -1.41
ATG4A-204ENST00000372246 TMEM139Q8IV31 216 aa6.25□□□□□ -1.41
ATG4A-204ENST00000372246 CCDC82Q8N4S0 544 aa6.25□□□□□ -1.41
ATG4A-204ENST00000372246 LINC00301Q8NCQ3 95 aa6.25□□□□□ -1.41
ATG4A-204ENST00000372246 SMARCC2Q8TAQ2 1214 aa6.25□□□□□ -1.41
ATG4A-204ENST00000372246 ZNF594Q96JF6 807 aaPredicted RBP6.25□□□□□ -1.41
ATG4A-204ENST00000372246 SRRTQ9BXP5 876 aaKnown RBP6.25□□□□□ -1.41
ATG4A-204ENST00000372246 FAN1Q9Y2M0 1017 aa6.25□□□□□ -1.41
ATG4A-204ENST00000372246 ARHGEF10O15013 1369 aa6.25□□□□□ -1.41
ATG4A-204ENST00000372246 FAM208AQ9UK61 1670 aaKnown RBP6.25□□□□□ -1.41
ATG4A-204ENST00000372246 AGLP35573 1532 aa6.25□□□□□ -1.41
ATG4A-204ENST00000372246 LOC102724159A0A0B4J2E5 919 aa6.25□□□□□ -1.41
ATG4A-204ENST00000372246 GRXCR2A6NFK2 248 aa6.25□□□□□ -1.41
ATG4A-204ENST00000372246 E7EWF7 191 aa6.25□□□□□ -1.41
ATG4A-204ENST00000372246 CLGNO14967 610 aa6.25□□□□□ -1.41
ATG4A-204ENST00000372246 FMR1Q06787 632 aaKnown RBP eCLIP6.25□□□□□ -1.41
ATG4A-204ENST00000372246 PWP2Q15269 919 aaKnown RBP6.25□□□□□ -1.41
ATG4A-204ENST00000372246 HSP90AB4PQ58FF6 505 aa6.25□□□□□ -1.41
ATG4A-204ENST00000372246 ZNF530Q6P9A1 599 aaPredicted RBP6.25□□□□□ -1.41
ATG4A-204ENST00000372246 UBE3BQ7Z3V4 1068 aa6.25□□□□□ -1.41
ATG4A-204ENST00000372246 PACS2Q86VP3 889 aa6.25□□□□□ -1.41
ATG4A-204ENST00000372246 ERC1Q8IUD2 1116 aa6.25□□□□□ -1.41
ATG4A-204ENST00000372246 CCDC12Q8WUD4 166 aaPredicted RBP6.25□□□□□ -1.41
ATG4A-204ENST00000372246 PHKBQ93100 1093 aa6.25□□□□□ -1.41
ATG4A-204ENST00000372246 DRC1Q96MC2 740 aa6.25□□□□□ -1.41
ATG4A-204ENST00000372246 EHD4Q9H223 541 aa6.25□□□□□ -1.41
ATG4A-204ENST00000372246 ATG3Q9NT62 314 aa6.25□□□□□ -1.41
ATG4A-204ENST00000372246 RRP15Q9Y3B9 282 aaKnown RBP6.25□□□□□ -1.41
ATG4A-204ENST00000372246 FLT4P35916 1363 aa6.25□□□□□ -1.41
ATG4A-204ENST00000372246 DIP2CQ9Y2E4 1556 aa6.25□□□□□ -1.41
ATG4A-204ENST00000372246 CARMIL3Q8ND23 1372 aa6.24□□□□□ -1.41
ATG4A-204ENST00000372246 PALLDQ8WX93 1383 aa6.24□□□□□ -1.41
ATG4A-204ENST00000372246 HTATSF1O43719 755 aaKnown RBP6.24□□□□□ -1.41
ATG4A-204ENST00000372246 DHX16O60231 1041 aaKnown RBP6.24□□□□□ -1.41
ATG4A-204ENST00000372246 NEMFO60524 1076 aa6.24□□□□□ -1.41
ATG4A-204ENST00000372246 PFKFB2O60825 505 aa6.24□□□□□ -1.41
ATG4A-204ENST00000372246 ALDH1L1O75891 902 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 132.3 ms