RNA–Protein interactions for RNA: ENST00000370397.7

CHUK-201, Transcript of conserved helix-loop-helix ubiquitous kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHUK, Length 3,625 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHUK-201ENST00000370397 MYO1BO43795 1136 aa20.23■□□□□ 0.83
CHUK-201ENST00000370397 TOGARAM2Q6ZUX3 1019 aa20.23■□□□□ 0.83
CHUK-201ENST00000370397 MPHOSPH8Q99549 860 aa20.23■□□□□ 0.83
CHUK-201ENST00000370397 C19orf44Q9H6X5 657 aa20.23■□□□□ 0.83
CHUK-201ENST00000370397 PRC1O43663 620 aa20.23■□□□□ 0.83
CHUK-201ENST00000370397 MARCKSP29966 332 aaPredicted RBP20.23■□□□□ 0.83
CHUK-201ENST00000370397 RAD51AP2Q09MP3 1159 aa20.23■□□□□ 0.83
CHUK-201ENST00000370397 PLBD2Q8NHP8 589 aa20.23■□□□□ 0.83
CHUK-201ENST00000370397 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.23■□□□□ 0.83
CHUK-201ENST00000370397 HOMER1Q86YM7 354 aa20.23■□□□□ 0.83
CHUK-201ENST00000370397 NEK11Q8NG66 645 aa20.23■□□□□ 0.83
CHUK-201ENST00000370397 LONRF3Q496Y0 759 aa20.22■□□□□ 0.83
CHUK-201ENST00000370397 ELOA2Q8IYF1 753 aaPredicted RBP20.22■□□□□ 0.83
CHUK-201ENST00000370397 RBM33Q96EV2 1170 aaKnown RBP20.22■□□□□ 0.83
CHUK-201ENST00000370397 CCDC9Q9Y3X0 531 aaKnown RBP20.22■□□□□ 0.83
CHUK-201ENST00000370397 MAP2K7O14733 419 aa20.22■□□□□ 0.83
CHUK-201ENST00000370397 SYKP43405 635 aa20.22■□□□□ 0.83
CHUK-201ENST00000370397 NT5DC1Q5TFE4 455 aa20.22■□□□□ 0.83
CHUK-201ENST00000370397 GPR161Q8N6U8 529 aaKnown RBP20.22■□□□□ 0.83
CHUK-201ENST00000370397 GOLGA8BA8MQT2 603 aa20.22■□□□□ 0.83
CHUK-201ENST00000370397 URI1O94763 535 aaPredicted RBP20.22■□□□□ 0.83
CHUK-201ENST00000370397 SNRPA1P09661 255 aaKnown RBP20.22■□□□□ 0.83
CHUK-201ENST00000370397 CHMP4CQ96CF2 233 aa20.22■□□□□ 0.83
CHUK-201ENST00000370397 MAP3K15Q6ZN16 1313 aa20.22■□□□□ 0.83
CHUK-201ENST00000370397 NBPF26B4DH59 902 aa20.21■□□□□ 0.83
CHUK-201ENST00000370397 NBPF14Q5TI25 921 aa20.21■□□□□ 0.83
CHUK-201ENST00000370397 NBPF10Q6P3W6 841 aaKnown RBP20.21■□□□□ 0.83
CHUK-201ENST00000370397 NBPF15Q8N660 670 aa20.21■□□□□ 0.83
CHUK-201ENST00000370397 A0A1B0GUL7 405 aa20.21■□□□□ 0.83
CHUK-201ENST00000370397 FOXN1O15353 648 aa20.21■□□□□ 0.83
CHUK-201ENST00000370397 NTRK3Q16288 839 aa20.21■□□□□ 0.83
CHUK-201ENST00000370397 APTXQ7Z2E3 356 aaKnown RBP20.21■□□□□ 0.83
CHUK-201ENST00000370397 FEZ2Q9UHY8 353 aaPredicted RBP20.21■□□□□ 0.83
CHUK-201ENST00000370397 ATRNO75882 1429 aa20.21■□□□□ 0.83
CHUK-201ENST00000370397 IL15P40933 162 aaPredicted RBP20.21■□□□□ 0.83
CHUK-201ENST00000370397 HAND2P61296 217 aa20.21■□□□□ 0.83
CHUK-201ENST00000370397 VPS37DQ86XT2 251 aa20.21■□□□□ 0.83
CHUK-201ENST00000370397 RAB11FIP4Q86YS3 637 aa20.21■□□□□ 0.83
CHUK-201ENST00000370397 CIAO1O76071 339 aa20.2■□□□□ 0.82
CHUK-201ENST00000370397 TPM4P67936 248 aa20.2■□□□□ 0.82
CHUK-201ENST00000370397 FMR1Q06787 632 aaKnown RBP eCLIP20.2■□□□□ 0.82
CHUK-201ENST00000370397 SCARF1Q14162 830 aa20.2■□□□□ 0.82
CHUK-201ENST00000370397 CLIC6Q96NY7 704 aa20.2■□□□□ 0.82
CHUK-201ENST00000370397 PARD6BQ9BYG5 372 aa20.2■□□□□ 0.82
CHUK-201ENST00000370397 PUS7LQ9H0K6 701 aaKnown RBP20.2■□□□□ 0.82
CHUK-201ENST00000370397 H3BQF6 201 aa20.2■□□□□ 0.82
CHUK-201ENST00000370397 OAS2P29728 719 aaKnown RBP20.2■□□□□ 0.82
CHUK-201ENST00000370397 ESCO1Q5FWF5 840 aa20.2■□□□□ 0.82
CHUK-201ENST00000370397 ARGLU1Q9NWB6 273 aaPredicted RBP20.2■□□□□ 0.82
CHUK-201ENST00000370397 NAP1L2Q9ULW6 460 aaPredicted RBP20.2■□□□□ 0.82
CHUK-201ENST00000370397 KCPQ6ZWJ8 1503 aa20.2■□□□□ 0.82
CHUK-201ENST00000370397 IFIT1P09914 478 aaKnown RBP20.2■□□□□ 0.82
CHUK-201ENST00000370397 SARSP49591 514 aaKnown RBP20.2■□□□□ 0.82
CHUK-201ENST00000370397 ZNF594Q96JF6 807 aaPredicted RBP20.2■□□□□ 0.82
CHUK-201ENST00000370397 NEUROD6Q96NK8 337 aa20.2■□□□□ 0.82
CHUK-201ENST00000370397 ATG3Q9NT62 314 aa20.2■□□□□ 0.82
CHUK-201ENST00000370397 TIAM2Q8IVF5 1701 aa20.19■□□□□ 0.82
CHUK-201ENST00000370397 EYA2O00167 538 aa20.19■□□□□ 0.82
CHUK-201ENST00000370397 CBFA2T2O43439 604 aa20.19■□□□□ 0.82
CHUK-201ENST00000370397 STX10O60499 249 aa20.19■□□□□ 0.82
CHUK-201ENST00000370397 PUS3Q9BZE2 481 aaKnown RBP20.19■□□□□ 0.82
CHUK-201ENST00000370397 FAM217BQ9NTX9 383 aaPredicted RBP20.19■□□□□ 0.82
CHUK-201ENST00000370397 PCDHA5Q9Y5H7 936 aa20.19■□□□□ 0.82
CHUK-201ENST00000370397 ZMYM6O95789 1325 aa20.19■□□□□ 0.82
CHUK-201ENST00000370397 PLEKHG2Q9H7P9 1386 aa20.19■□□□□ 0.82
CHUK-201ENST00000370397 BCL9LQ86UU0 1499 aa20.19■□□□□ 0.82
CHUK-201ENST00000370397 TPM1P09493 284 aa20.19■□□□□ 0.82
CHUK-201ENST00000370397 KRBA2Q6ZNG9 492 aa20.19■□□□□ 0.82
CHUK-201ENST00000370397 SENP2Q9HC62 589 aa20.19■□□□□ 0.82
CHUK-201ENST00000370397 DOCK2Q92608 1830 aa20.19■□□□□ 0.82
CHUK-201ENST00000370397 SMC1AQ14683 1233 aaKnown RBP20.19■□□□□ 0.82
CHUK-201ENST00000370397 CFAP100Q494V2 611 aa20.19■□□□□ 0.82
CHUK-201ENST00000370397 MRPL44Q9H9J2 332 aaKnown RBP20.19■□□□□ 0.82
CHUK-201ENST00000370397 ZSCAN12O43309 604 aa20.18■□□□□ 0.82
CHUK-201ENST00000370397 TEX13AQ9BXU3 409 aaPredicted RBP20.18■□□□□ 0.82
CHUK-201ENST00000370397 POLR3GO15318 223 aaPredicted RBP20.18■□□□□ 0.82
CHUK-201ENST00000370397 RANBP6O60518 1105 aaKnown RBP20.18■□□□□ 0.82
CHUK-201ENST00000370397 RABGGTAQ92696 567 aa20.18■□□□□ 0.82
CHUK-201ENST00000370397 ORAI2Q96SN7 254 aa20.18■□□□□ 0.82
CHUK-201ENST00000370397 UBE2Q2LH0YL09 131 aa20.17■□□□□ 0.82
CHUK-201ENST00000370397 DHX16O60231 1041 aaKnown RBP20.17■□□□□ 0.82
CHUK-201ENST00000370397 TOP1P11387 765 aaKnown RBP20.17■□□□□ 0.82
CHUK-201ENST00000370397 PPP2R3AQ06190 1150 aa20.17■□□□□ 0.82
CHUK-201ENST00000370397 CYB5R4Q7L1T6 521 aa20.17■□□□□ 0.82
CHUK-201ENST00000370397 STK11IPQ8N1F8 1099 aa20.17■□□□□ 0.82
CHUK-201ENST00000370397 DHX58Q96C10 678 aa20.17■□□□□ 0.82
CHUK-201ENST00000370397 BAG1Q99933 345 aaPredicted RBP20.17■□□□□ 0.82
CHUK-201ENST00000370397 SEC31BQ9NQW1 1179 aa20.17■□□□□ 0.82
CHUK-201ENST00000370397 CYP27B1O15528 508 aa20.17■□□□□ 0.82
CHUK-201ENST00000370397 SERPINC1P01008 464 aa20.17■□□□□ 0.82
CHUK-201ENST00000370397 MNS1Q8NEH6 495 aa20.17■□□□□ 0.82
CHUK-201ENST00000370397 PSD3Q9NYI0 1048 aa20.17■□□□□ 0.82
CHUK-201ENST00000370397 MYH8P13535 1937 aa20.17■□□□□ 0.82
CHUK-201ENST00000370397 A0A0U1RQJ8 604 aa20.17■□□□□ 0.82
CHUK-201ENST00000370397 KRT40Q6A162 431 aa20.17■□□□□ 0.82
CHUK-201ENST00000370397 SYNE3Q6ZMZ3 975 aa20.17■□□□□ 0.82
CHUK-201ENST00000370397 ATRIPQ8WXE1 791 aa20.17■□□□□ 0.82
CHUK-201ENST00000370397 ANKZF1Q9H8Y5 726 aa20.17■□□□□ 0.82
CHUK-201ENST00000370397 SHANK3Q9BYB0 1731 aa20.17■□□□□ 0.82
CHUK-201ENST00000370397 ADORA1P30542 326 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms