RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 PI16Q6UXB8 463 aa22.6■■□□□ 1.21
CHTOP-202ENST00000368687 RAI14Q9P0K7 980 aa22.6■■□□□ 1.21
CHTOP-202ENST00000368687 MROH7-TTC4A0A0A0MT08 1334 aa22.59■■□□□ 1.21
CHTOP-202ENST00000368687 MAP2K2P36507 400 aa22.59■■□□□ 1.21
CHTOP-202ENST00000368687 MECOMQ03112 1051 aa22.59■■□□□ 1.21
CHTOP-202ENST00000368687 TTF1Q15361 905 aaPredicted RBP22.59■■□□□ 1.21
CHTOP-202ENST00000368687 IFFO2Q5TF58 517 aa22.59■■□□□ 1.21
CHTOP-202ENST00000368687 RGMBQ6NW40 437 aa22.59■■□□□ 1.21
CHTOP-202ENST00000368687 AOX1Q06278 1338 aa22.58■■□□□ 1.21
CHTOP-202ENST00000368687 TCP10L2B9ZVM9 353 aa22.58■■□□□ 1.21
CHTOP-202ENST00000368687 AOC2O75106 756 aa22.58■■□□□ 1.21
CHTOP-202ENST00000368687 NOGQ13253 232 aa22.58■■□□□ 1.21
CHTOP-202ENST00000368687 NSUN4Q96CB9 384 aaKnown RBP22.58■■□□□ 1.21
CHTOP-202ENST00000368687 NOL10Q9BSC4 688 aaKnown RBP22.58■■□□□ 1.21
CHTOP-202ENST00000368687 PCDHB15Q9Y5E8 787 aa22.58■■□□□ 1.21
CHTOP-202ENST00000368687 MAP2K1Q02750 393 aaPredicted RBP22.57■■□□□ 1.2
CHTOP-202ENST00000368687 PRAMEF18Q5VWM3 479 aa22.57■■□□□ 1.2
CHTOP-202ENST00000368687 CDC42EP5Q6NZY7 148 aa22.57■■□□□ 1.2
CHTOP-202ENST00000368687 GPATCH3Q96I76 525 aa22.57■■□□□ 1.2
CHTOP-202ENST00000368687 SUPT16HQ9Y5B9 1047 aaKnown RBP22.57■■□□□ 1.2
CHTOP-202ENST00000368687 CYP2E1P05181 493 aaPredicted RBP22.56■■□□□ 1.2
CHTOP-202ENST00000368687 ZAP70P43403 619 aa22.56■■□□□ 1.2
CHTOP-202ENST00000368687 ZNF157P51786 506 aaPredicted RBP22.56■■□□□ 1.2
CHTOP-202ENST00000368687 HDAC1Q13547 482 aaPredicted RBP22.56■■□□□ 1.2
CHTOP-202ENST00000368687 MAP3K11Q16584 847 aa22.56■■□□□ 1.2
CHTOP-202ENST00000368687 TBC1D9Q6ZT07 1266 aa22.56■■□□□ 1.2
CHTOP-202ENST00000368687 CERS3Q8IU89 383 aa22.56■■□□□ 1.2
CHTOP-202ENST00000368687 AIDAQ96BJ3 306 aa22.56■■□□□ 1.2
CHTOP-202ENST00000368687 SNRKQ9NRH2 765 aa22.56■■□□□ 1.2
CHTOP-202ENST00000368687 USP40Q9NVE5 1235 aa22.56■■□□□ 1.2
CHTOP-202ENST00000368687 DOCK2Q92608 1830 aa22.56■■□□□ 1.2
CHTOP-202ENST00000368687 GPR75-ASB3A0A0A6YYF3 556 aa22.55■■□□□ 1.2
CHTOP-202ENST00000368687 PLCG2P16885 1265 aa22.55■■□□□ 1.2
CHTOP-202ENST00000368687 IREB2P48200 963 aaKnown RBP22.55■■□□□ 1.2
CHTOP-202ENST00000368687 NAA16Q6N069 864 aaPredicted RBP22.55■■□□□ 1.2
CHTOP-202ENST00000368687 REM2Q8IYK8 340 aaPredicted RBP22.55■■□□□ 1.2
CHTOP-202ENST00000368687 FAM151AQ8WW52 585 aa22.55■■□□□ 1.2
CHTOP-202ENST00000368687 GCC1Q96CN9 775 aa22.55■■□□□ 1.2
CHTOP-202ENST00000368687 IDI2Q9BXS1 227 aa22.55■■□□□ 1.2
CHTOP-202ENST00000368687 ZBTB47Q9UFB7 747 aaPredicted RBP22.55■■□□□ 1.2
CHTOP-202ENST00000368687 BAG3O95817 575 aa22.54■■□□□ 1.2
CHTOP-202ENST00000368687 BTDP43251 543 aa22.54■■□□□ 1.2
CHTOP-202ENST00000368687 MAP3K12Q12852 859 aa22.54■■□□□ 1.2
CHTOP-202ENST00000368687 TEPSINQ96N21 525 aa22.54■■□□□ 1.2
CHTOP-202ENST00000368687 ANGEL1Q9UNK9 670 aaKnown RBP22.54■■□□□ 1.2
CHTOP-202ENST00000368687 SSC5DA1L4H1 1573 aa22.54■■□□□ 1.2
CHTOP-202ENST00000368687 AK9Q5TCS8 1911 aa22.53■■□□□ 1.2
CHTOP-202ENST00000368687 ENTPD3O75355 529 aa22.53■■□□□ 1.2
CHTOP-202ENST00000368687 NPM3O75607 178 aaKnown RBP22.53■■□□□ 1.2
CHTOP-202ENST00000368687 ATP5JP18859 108 aa22.53■■□□□ 1.2
CHTOP-202ENST00000368687 CTCFP49711 727 aaPredicted RBP22.53■■□□□ 1.2
CHTOP-202ENST00000368687 NBPF12Q5TAG4 269 aaPredicted RBP22.53■■□□□ 1.2
CHTOP-202ENST00000368687 DCAF15Q66K64 600 aa22.53■■□□□ 1.2
CHTOP-202ENST00000368687 ZIC5Q96T25 663 aa22.53■■□□□ 1.2
CHTOP-202ENST00000368687 TMEM39BQ9GZU3 492 aa22.53■■□□□ 1.2
CHTOP-202ENST00000368687 MYO5AQ9Y4I1 1855 aaKnown RBP22.52■■□□□ 1.2
CHTOP-202ENST00000368687 SLC10A3P09131 477 aa22.52■■□□□ 1.2
CHTOP-202ENST00000368687 CACNB3P54284 484 aa22.52■■□□□ 1.2
CHTOP-202ENST00000368687 BEGAINQ9BUH8 593 aa22.52■■□□□ 1.2
CHTOP-202ENST00000368687 RFX7Q2KHR2 1363 aa22.51■■□□□ 1.19
CHTOP-202ENST00000368687 FAM155AB1AL88 458 aaPredicted RBP22.51■■□□□ 1.19
CHTOP-202ENST00000368687 UBE2Q2LH0YL09 131 aa22.51■■□□□ 1.19
CHTOP-202ENST00000368687 IDH1O75874 414 aaKnown RBP22.51■■□□□ 1.19
CHTOP-202ENST00000368687 LDLRAD1Q5T700 205 aa22.51■■□□□ 1.19
CHTOP-202ENST00000368687 ZNF384Q8TF68 577 aa22.51■■□□□ 1.19
CHTOP-202ENST00000368687 RWDD1Q9H446 243 aaPredicted RBP22.51■■□□□ 1.19
CHTOP-202ENST00000368687 HSPA8P11142 646 aaKnown RBP22.5■■□□□ 1.19
CHTOP-202ENST00000368687 LBX1P52954 281 aa22.5■■□□□ 1.19
CHTOP-202ENST00000368687 ANKRD13AQ8IZ07 590 aa22.5■■□□□ 1.19
CHTOP-202ENST00000368687 PIH1D3Q9NQM4 214 aaKnown RBP22.5■■□□□ 1.19
CHTOP-202ENST00000368687 ECHDC1Q9NTX5 307 aa22.5■■□□□ 1.19
CHTOP-202ENST00000368687 COL2A1P02458 1487 aaPredicted RBP22.49■■□□□ 1.19
CHTOP-202ENST00000368687 CA12O43570 354 aa22.49■■□□□ 1.19
CHTOP-202ENST00000368687 PRKG1Q13976 671 aa22.49■■□□□ 1.19
CHTOP-202ENST00000368687 MOB2Q70IA6 237 aa22.49■■□□□ 1.19
CHTOP-202ENST00000368687 RASAL3Q86YV0 1011 aa22.49■■□□□ 1.19
CHTOP-202ENST00000368687 TNS4Q8IZW8 715 aa22.49■■□□□ 1.19
CHTOP-202ENST00000368687 BCL11AQ9H165 835 aa22.49■■□□□ 1.19
CHTOP-202ENST00000368687 PRDM10Q9NQV6 1147 aa22.49■■□□□ 1.19
CHTOP-202ENST00000368687 SMARCA5O60264 1052 aaPredicted RBP22.48■■□□□ 1.19
CHTOP-202ENST00000368687 RGS3P49796 1198 aa22.48■■□□□ 1.19
CHTOP-202ENST00000368687 RHBDL3P58872 404 aa22.48■■□□□ 1.19
CHTOP-202ENST00000368687 PPP4CP60510 307 aa22.48■■□□□ 1.19
CHTOP-202ENST00000368687 NFIAQ12857 509 aa22.48■■□□□ 1.19
CHTOP-202ENST00000368687 DNAJC2Q99543 621 aaKnown RBP22.48■■□□□ 1.19
CHTOP-202ENST00000368687 HAUS7Q99871 368 aa22.48■■□□□ 1.19
CHTOP-202ENST00000368687 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.48■■□□□ 1.19
CHTOP-202ENST00000368687 PAG1Q9NWQ8 432 aa22.48■■□□□ 1.19
CHTOP-202ENST00000368687 FAM198AQ9UFP1 575 aa22.48■■□□□ 1.19
CHTOP-202ENST00000368687 OTOFQ9HC10 1997 aa22.47■■□□□ 1.19
CHTOP-202ENST00000368687 USP2O75604 605 aaPredicted RBP22.47■■□□□ 1.19
CHTOP-202ENST00000368687 WDHD1O75717 1129 aaPredicted RBP22.47■■□□□ 1.19
CHTOP-202ENST00000368687 TCP10Q12799 353 aa22.47■■□□□ 1.19
CHTOP-202ENST00000368687 SLC10A4Q96EP9 437 aa22.47■■□□□ 1.19
CHTOP-202ENST00000368687 TTC41PQ6P2S7 1318 aa22.47■■□□□ 1.19
CHTOP-202ENST00000368687 FOCADQ5VW36 1801 aa22.46■■□□□ 1.19
CHTOP-202ENST00000368687 GOLIM4O00461 696 aa22.46■■□□□ 1.19
CHTOP-202ENST00000368687 ERC2O15083 957 aa22.46■■□□□ 1.19
CHTOP-202ENST00000368687 ZBTB48P10074 688 aaPredicted RBP22.46■■□□□ 1.19
CHTOP-202ENST00000368687 CYP7A1P22680 504 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms