RNA–Protein interactions for RNA: ENST00000368378.7

THBS3-201, Transcript of thrombospondin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THBS3, Length 3,145 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-201ENST00000368378 PRDM1O75626 825 aa10.26□□□□□ -0.77
THBS3-201ENST00000368378 METAP2P50579 478 aaKnown RBP eCLIP10.26□□□□□ -0.77
THBS3-201ENST00000368378 FOXO4P98177 505 aa10.26□□□□□ -0.77
THBS3-201ENST00000368378 DMTNQ08495 405 aa10.26□□□□□ -0.77
THBS3-201ENST00000368378 ARHGAP29Q52LW3 1261 aa10.26□□□□□ -0.77
THBS3-201ENST00000368378 TEX35Q5T0J7 233 aa10.26□□□□□ -0.77
THBS3-201ENST00000368378 MNS1Q8NEH6 495 aa10.26□□□□□ -0.77
THBS3-201ENST00000368378 GRIN1Q05586 938 aa10.25□□□□□ -0.77
THBS3-201ENST00000368378 MYSM1Q5VVJ2 828 aa10.25□□□□□ -0.77
THBS3-201ENST00000368378 ARMCX5Q6P1M9 558 aa10.25□□□□□ -0.77
THBS3-201ENST00000368378 IRX2Q9BZI1 471 aaPredicted RBP10.25□□□□□ -0.77
THBS3-201ENST00000368378 KIAA1468Q9P260 1216 aa10.25□□□□□ -0.77
THBS3-201ENST00000368378 TFRCP02786 760 aaKnown RBP10.25□□□□□ -0.77
THBS3-201ENST00000368378 CCZ1BP86790 482 aa10.25□□□□□ -0.77
THBS3-201ENST00000368378 CCZ1P86791 482 aaPredicted RBP10.25□□□□□ -0.77
THBS3-201ENST00000368378 IFIT5Q13325 482 aaKnown RBP10.25□□□□□ -0.77
THBS3-201ENST00000368378 SMIM5Q71RC9 77 aa10.25□□□□□ -0.77
THBS3-201ENST00000368378 SMYD4Q8IYR2 804 aaPredicted RBP10.25□□□□□ -0.77
THBS3-201ENST00000368378 CCDC24Q8N4L8 307 aa10.25□□□□□ -0.77
THBS3-201ENST00000368378 CNNM3Q8NE01 707 aa10.25□□□□□ -0.77
THBS3-201ENST00000368378 ALDH8A1Q9H2A2 487 aaPredicted RBP10.25□□□□□ -0.77
THBS3-201ENST00000368378 ZCCHC17Q9NP64 241 aaKnown RBP10.25□□□□□ -0.77
THBS3-201ENST00000368378 FANCLQ9NW38 375 aa10.25□□□□□ -0.77
THBS3-201ENST00000368378 RCOR1Q9UKL0 485 aa10.25□□□□□ -0.77
THBS3-201ENST00000368378 MAPK8IP1Q9UQF2 711 aa10.25□□□□□ -0.77
THBS3-201ENST00000368378 PRKAB2O43741 272 aa10.24□□□□□ -0.77
THBS3-201ENST00000368378 VPS37DQ86XT2 251 aa10.24□□□□□ -0.77
THBS3-201ENST00000368378 DNAJC10Q8IXB1 793 aa10.24□□□□□ -0.77
THBS3-201ENST00000368378 LINC00301Q8NCQ3 95 aa10.24□□□□□ -0.77
THBS3-201ENST00000368378 LZTFL1Q9NQ48 299 aa10.24□□□□□ -0.77
THBS3-201ENST00000368378 ASAP1Q9ULH1 1129 aa10.24□□□□□ -0.77
THBS3-201ENST00000368378 OVOS2A0A0G2JMS6 1433 aa10.24□□□□□ -0.77
THBS3-201ENST00000368378 MROH7-TTC4A0A0A0MT08 1334 aa10.24□□□□□ -0.77
THBS3-201ENST00000368378 CASP7P55210 303 aa10.24□□□□□ -0.77
THBS3-201ENST00000368378 FANCCQ00597 558 aa10.24□□□□□ -0.77
THBS3-201ENST00000368378 TRIM29Q14134 588 aa10.24□□□□□ -0.77
THBS3-201ENST00000368378 GRIPAP1Q4V328 841 aa10.24□□□□□ -0.77
THBS3-201ENST00000368378 UTP14CQ5TAP6 766 aaKnown RBP10.24□□□□□ -0.77
THBS3-201ENST00000368378 PPP4R3CPQ6ZMV5 832 aa10.24□□□□□ -0.77
THBS3-201ENST00000368378 AIDAQ96BJ3 306 aa10.24□□□□□ -0.77
THBS3-201ENST00000368378 CARD6Q9BX69 1037 aa10.24□□□□□ -0.77
THBS3-201ENST00000368378 GREM2Q9H772 168 aa10.24□□□□□ -0.77
THBS3-201ENST00000368378 IFIT3O14879 490 aaKnown RBP10.24□□□□□ -0.77
THBS3-201ENST00000368378 ERCC3P19447 782 aa10.24□□□□□ -0.77
THBS3-201ENST00000368378 CDC27P30260 824 aa10.24□□□□□ -0.77
THBS3-201ENST00000368378 GUCY1A2P33402 732 aa10.24□□□□□ -0.77
THBS3-201ENST00000368378 GTF2F1P35269 517 aaKnown RBP eCLIP10.24□□□□□ -0.77
THBS3-201ENST00000368378 IL15P40933 162 aaPredicted RBP10.24□□□□□ -0.77
THBS3-201ENST00000368378 PPARDQ03181 441 aa10.24□□□□□ -0.77
THBS3-201ENST00000368378 NR5A1Q13285 461 aa10.24□□□□□ -0.77
THBS3-201ENST00000368378 ZMYM1Q5SVZ6 1142 aa10.24□□□□□ -0.77
THBS3-201ENST00000368378 ANO1Q5XXA6 986 aa10.24□□□□□ -0.77
THBS3-201ENST00000368378 E4F1Q66K89 784 aaPredicted RBP10.24□□□□□ -0.77
THBS3-201ENST00000368378 NCOA7Q8NI08 942 aa10.24□□□□□ -0.77
THBS3-201ENST00000368378 SMARCC2Q8TAQ2 1214 aa10.24□□□□□ -0.77
THBS3-201ENST00000368378 CTNNA3Q9UI47 895 aa10.24□□□□□ -0.77
THBS3-201ENST00000368378 SOS2Q07890 1332 aaPredicted RBP10.24□□□□□ -0.77
THBS3-201ENST00000368378 JCADQ9P266 1359 aa10.23□□□□□ -0.77
THBS3-201ENST00000368378 GOLGA8AA7E2F4 631 aa10.23□□□□□ -0.77
THBS3-201ENST00000368378 BTBD18B2RXH4 712 aa10.23□□□□□ -0.77
THBS3-201ENST00000368378 KCNQ4P56696 695 aa10.23□□□□□ -0.77
THBS3-201ENST00000368378 TPM4P67936 248 aa10.23□□□□□ -0.77
THBS3-201ENST00000368378 HLFQ16534 295 aa10.23□□□□□ -0.77
THBS3-201ENST00000368378 FAM98CQ17RN3 349 aaKnown RBP10.23□□□□□ -0.77
THBS3-201ENST00000368378 TMEM67Q5HYA8 995 aa10.23□□□□□ -0.77
THBS3-201ENST00000368378 CYB5R4Q7L1T6 521 aa10.23□□□□□ -0.77
THBS3-201ENST00000368378 NBPF11Q86T75 865 aa10.23□□□□□ -0.77
THBS3-201ENST00000368378 ARMT1Q9H993 441 aa10.23□□□□□ -0.77
THBS3-201ENST00000368378 TRMT112Q9UI30 125 aaKnown RBP10.23□□□□□ -0.77
THBS3-201ENST00000368378 WWC3Q9ULE0 1092 aa10.23□□□□□ -0.77
THBS3-201ENST00000368378 SH3TC1Q8TE82 1336 aa10.23□□□□□ -0.77
THBS3-201ENST00000368378 SIPA1L3O60292 1781 aaPredicted RBP10.23□□□□□ -0.77
THBS3-201ENST00000368378 NRDCO43847 1150 aa10.23□□□□□ -0.77
THBS3-201ENST00000368378 PHKA1P46020 1223 aa10.23□□□□□ -0.77
THBS3-201ENST00000368378 GNG11P61952 73 aa10.23□□□□□ -0.77
THBS3-201ENST00000368378 KRT40Q6A162 431 aa10.23□□□□□ -0.77
THBS3-201ENST00000368378 TBC1D10CQ8IV04 446 aa10.23□□□□□ -0.77
THBS3-201ENST00000368378 FMR1NBQ8N0W7 255 aaPredicted RBP10.23□□□□□ -0.77
THBS3-201ENST00000368378 PPP1R13BQ96KQ4 1090 aa10.23□□□□□ -0.77
THBS3-201ENST00000368378 HELLSQ9NRZ9 838 aa10.23□□□□□ -0.77
THBS3-201ENST00000368378 SLIT3O75094 1523 aa10.23□□□□□ -0.77
THBS3-201ENST00000368378 WTIPA6NIX2 430 aaPredicted RBP10.22□□□□□ -0.77
THBS3-201ENST00000368378 H7C1W4 665 aa10.22□□□□□ -0.77
THBS3-201ENST00000368378 SLU7O95391 586 aaKnown RBP10.22□□□□□ -0.77
THBS3-201ENST00000368378 TOP1P11387 765 aaKnown RBP10.22□□□□□ -0.77
THBS3-201ENST00000368378 MCAMP43121 646 aa10.22□□□□□ -0.77
THBS3-201ENST00000368378 ANTXR2P58335 489 aa10.22□□□□□ -0.77
THBS3-201ENST00000368378 USP49Q70CQ1 688 aa10.22□□□□□ -0.77
THBS3-201ENST00000368378 RGS22Q8NE09 1264 aa10.22□□□□□ -0.77
THBS3-201ENST00000368378 FBXO18Q8NFZ0 1043 aa10.22□□□□□ -0.77
THBS3-201ENST00000368378 FBXO41Q8TF61 875 aa10.22□□□□□ -0.77
THBS3-201ENST00000368378 PAXBP1Q9Y5B6 917 aa10.22□□□□□ -0.77
THBS3-201ENST00000368378 POLR2DO15514 142 aaKnown RBP10.22□□□□□ -0.77
THBS3-201ENST00000368378 ITGA6P23229 1130 aa10.22□□□□□ -0.77
THBS3-201ENST00000368378 TDO2P48775 406 aa10.22□□□□□ -0.77
THBS3-201ENST00000368378 BICDL1Q6ZP65 573 aa10.22□□□□□ -0.77
THBS3-201ENST00000368378 RBM43Q6ZSC3 357 aaKnown RBP10.22□□□□□ -0.77
THBS3-201ENST00000368378 MAGEB6Q8N7X4 407 aa10.22□□□□□ -0.77
THBS3-201ENST00000368378 ANKRD7Q92527 254 aa10.22□□□□□ -0.77
THBS3-201ENST00000368378 UBXN4Q92575 508 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms