RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 PAXIP1Q6ZW49 1069 aaPredicted RBP12.12□□□□□ -0.47
CD48-202ENST00000368046 CAPNS2Q96L46 248 aa12.12□□□□□ -0.47
CD48-202ENST00000368046 ZDHHC15Q96MV8 337 aa12.12□□□□□ -0.47
CD48-202ENST00000368046 PPP2R3BQ9Y5P8 575 aa12.12□□□□□ -0.47
CD48-202ENST00000368046 ARID4AP29374 1257 aaPredicted RBP12.11□□□□□ -0.47
CD48-202ENST00000368046 PRDX5P30044 214 aa12.11□□□□□ -0.47
CD48-202ENST00000368046 MAP2K2P36507 400 aa12.11□□□□□ -0.47
CD48-202ENST00000368046 TNFAIP1Q13829 316 aa12.11□□□□□ -0.47
CD48-202ENST00000368046 RASA3Q14644 834 aa12.11□□□□□ -0.47
CD48-202ENST00000368046 SUPT20HL1Q3ZLR7 823 aa12.11□□□□□ -0.47
CD48-202ENST00000368046 SPTY2D1Q68D10 685 aaPredicted RBP12.11□□□□□ -0.47
CD48-202ENST00000368046 APOBEC3HQ6NTF7 200 aaKnown RBP12.11□□□□□ -0.47
CD48-202ENST00000368046 RGMBQ6NW40 437 aa12.11□□□□□ -0.47
CD48-202ENST00000368046 SPATA5Q8NB90 893 aa12.11□□□□□ -0.47
CD48-202ENST00000368046 CCDC102AQ96A19 550 aa12.11□□□□□ -0.47
CD48-202ENST00000368046 EAF2Q96CJ1 260 aaPredicted RBP12.11□□□□□ -0.47
CD48-202ENST00000368046 ZNF512BQ96KM6 892 aaPredicted RBP12.11□□□□□ -0.47
CD48-202ENST00000368046 VEZTQ9HBM0 779 aa12.11□□□□□ -0.47
CD48-202ENST00000368046 HMG20BQ9P0W2 317 aa12.11□□□□□ -0.47
CD48-202ENST00000368046 EXOC6BQ9Y2D4 811 aa12.11□□□□□ -0.47
CD48-202ENST00000368046 ZNF646O15015 1829 aaPredicted RBP12.11□□□□□ -0.47
CD48-202ENST00000368046 AOX1Q06278 1338 aa12.11□□□□□ -0.47
CD48-202ENST00000368046 RAB11FIP3O75154 756 aa12.1□□□□□ -0.47
CD48-202ENST00000368046 TNNI2P48788 182 aa12.1□□□□□ -0.47
CD48-202ENST00000368046 RRP1P56182 461 aaKnown RBP12.1□□□□□ -0.47
CD48-202ENST00000368046 GRM1Q13255 1194 aa12.1□□□□□ -0.47
CD48-202ENST00000368046 RHPN1Q8TCX5 695 aa12.1□□□□□ -0.47
CD48-202ENST00000368046 DBNDD2Q9BQY9 259 aa12.1□□□□□ -0.47
CD48-202ENST00000368046 CCDC8Q9H0W5 538 aaPredicted RBP12.1□□□□□ -0.47
CD48-202ENST00000368046 ABCF2Q9UG63 623 aa12.1□□□□□ -0.47
CD48-202ENST00000368046 UBE2Q2LH0YL09 131 aa12.09□□□□□ -0.47
CD48-202ENST00000368046 PPP1R12BO60237 982 aaPredicted RBP12.09□□□□□ -0.47
CD48-202ENST00000368046 ZNF157P51786 506 aaPredicted RBP12.09□□□□□ -0.47
CD48-202ENST00000368046 MAP2K1Q02750 393 aaPredicted RBP12.09□□□□□ -0.47
CD48-202ENST00000368046 TTLL12Q14166 644 aaPredicted RBP12.09□□□□□ -0.47
CD48-202ENST00000368046 TTC39AQ5SRH9 613 aa12.09□□□□□ -0.47
CD48-202ENST00000368046 FKBP1CQ5VVH2 108 aa12.09□□□□□ -0.47
CD48-202ENST00000368046 ERICH6Q7L0X2 663 aa12.09□□□□□ -0.47
CD48-202ENST00000368046 SLF2Q8IX21 1173 aa12.09□□□□□ -0.47
CD48-202ENST00000368046 KIF1BPQ96EK5 621 aa12.09□□□□□ -0.47
CD48-202ENST00000368046 WBP1LQ9NX94 342 aa12.09□□□□□ -0.47
CD48-202ENST00000368046 TCP10L2B9ZVM9 353 aa12.08□□□□□ -0.48
CD48-202ENST00000368046 AOC2O75106 756 aa12.08□□□□□ -0.48
CD48-202ENST00000368046 MCAMP43121 646 aa12.08□□□□□ -0.48
CD48-202ENST00000368046 NOGQ13253 232 aa12.08□□□□□ -0.48
CD48-202ENST00000368046 DIXDC1Q155Q3 683 aa12.08□□□□□ -0.48
CD48-202ENST00000368046 NBPF12Q5TAG4 269 aaPredicted RBP12.08□□□□□ -0.48
CD48-202ENST00000368046 MOB2Q70IA6 237 aa12.08□□□□□ -0.48
CD48-202ENST00000368046 ARMC9Q7Z3E5 817 aa12.08□□□□□ -0.48
CD48-202ENST00000368046 FAM83AQ86UY5 434 aa12.08□□□□□ -0.48
CD48-202ENST00000368046 CLASRPQ8N2M8 674 aaKnown RBP12.08□□□□□ -0.48
CD48-202ENST00000368046 TMOD2Q9NZR1 351 aa12.08□□□□□ -0.48
CD48-202ENST00000368046 DBNLQ9UJU6 430 aaKnown RBP12.08□□□□□ -0.48
CD48-202ENST00000368046 COL1A1P02452 1464 aaPredicted RBP12.08□□□□□ -0.48
CD48-202ENST00000368046 UNCXA6NJT0 531 aa12.07□□□□□ -0.48
CD48-202ENST00000368046 IGSF3O75054 1194 aa12.07□□□□□ -0.48
CD48-202ENST00000368046 LDHCP07864 332 aa12.07□□□□□ -0.48
CD48-202ENST00000368046 HSPA1AP0DMV8 641 aaKnown RBP12.07□□□□□ -0.48
CD48-202ENST00000368046 HSPA1BP0DMV9 641 aaKnown RBP12.07□□□□□ -0.48
CD48-202ENST00000368046 PRKG1Q13976 671 aa12.07□□□□□ -0.48
CD48-202ENST00000368046 MAP3K11Q16584 847 aa12.07□□□□□ -0.48
CD48-202ENST00000368046 LDLRAD1Q5T700 205 aa12.07□□□□□ -0.48
CD48-202ENST00000368046 CDC42EP5Q6NZY7 148 aa12.07□□□□□ -0.48
CD48-202ENST00000368046 PI16Q6UXB8 463 aa12.07□□□□□ -0.48
CD48-202ENST00000368046 TBC1D9Q6ZT07 1266 aa12.07□□□□□ -0.48
CD48-202ENST00000368046 AACSQ86V21 672 aa12.07□□□□□ -0.48
CD48-202ENST00000368046 DZIP1Q86YF9 867 aaKnown RBP12.07□□□□□ -0.48
CD48-202ENST00000368046 TMEM121BQ9BXQ6 578 aaPredicted RBP12.07□□□□□ -0.48
CD48-202ENST00000368046 IL1RAPL2Q9NP60 686 aa12.07□□□□□ -0.48
CD48-202ENST00000368046 SNRKQ9NRH2 765 aa12.07□□□□□ -0.48
CD48-202ENST00000368046 USP40Q9NVE5 1235 aa12.07□□□□□ -0.48
CD48-202ENST00000368046 LRP2BPQ9P2M1 347 aa12.07□□□□□ -0.48
CD48-202ENST00000368046 ANGEL1Q9UNK9 670 aaKnown RBP12.07□□□□□ -0.48
CD48-202ENST00000368046 DAGLAQ9Y4D2 1042 aa12.07□□□□□ -0.48
CD48-202ENST00000368046 POLR2AP24928 1970 aaKnown RBP12.07□□□□□ -0.48
CD48-202ENST00000368046 TRPM7Q96QT4 1865 aa12.06□□□□□ -0.48
CD48-202ENST00000368046 FAM155AB1AL88 458 aaPredicted RBP12.06□□□□□ -0.48
CD48-202ENST00000368046 APBB1O00213 710 aa12.06□□□□□ -0.48
CD48-202ENST00000368046 USP2O75604 605 aaPredicted RBP12.06□□□□□ -0.48
CD48-202ENST00000368046 GSTO1P78417 241 aa12.06□□□□□ -0.48
CD48-202ENST00000368046 MECOMQ03112 1051 aa12.06□□□□□ -0.48
CD48-202ENST00000368046 FAM151AQ8WW52 585 aa12.06□□□□□ -0.48
CD48-202ENST00000368046 NSUN4Q96CB9 384 aaKnown RBP12.06□□□□□ -0.48
CD48-202ENST00000368046 TEPSINQ96N21 525 aa12.06□□□□□ -0.48
CD48-202ENST00000368046 BEGAINQ9BUH8 593 aa12.06□□□□□ -0.48
CD48-202ENST00000368046 TMEM39BQ9GZU3 492 aa12.06□□□□□ -0.48
CD48-202ENST00000368046 DCTPP1Q9H773 170 aa12.06□□□□□ -0.48
CD48-202ENST00000368046 TLR7Q9NYK1 1049 aaKnown RBP12.06□□□□□ -0.48
CD48-202ENST00000368046 PCDHB13Q9Y5F0 798 aa12.06□□□□□ -0.48
CD48-202ENST00000368046 GPR75-ASB3A0A0A6YYF3 556 aa12.05□□□□□ -0.48
CD48-202ENST00000368046 CYP2E1P05181 493 aaPredicted RBP12.05□□□□□ -0.48
CD48-202ENST00000368046 SLC10A3P09131 477 aa12.05□□□□□ -0.48
CD48-202ENST00000368046 PLCG2P16885 1265 aa12.05□□□□□ -0.48
CD48-202ENST00000368046 ZAP70P43403 619 aa12.05□□□□□ -0.48
CD48-202ENST00000368046 CACNB3P54284 484 aa12.05□□□□□ -0.48
CD48-202ENST00000368046 KIF23Q02241 960 aaPredicted RBP12.05□□□□□ -0.48
CD48-202ENST00000368046 AIDAQ96BJ3 306 aa12.05□□□□□ -0.48
CD48-202ENST00000368046 HOOK2Q96ED9 719 aa12.05□□□□□ -0.48
CD48-202ENST00000368046 SLC10A4Q96EP9 437 aa12.05□□□□□ -0.48
CD48-202ENST00000368046 RAI14Q9P0K7 980 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms