RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 CDC42EP5Q6NZY7 148 aa29.34■■■□□ 2.29
PFDN2-201ENST00000368010 CDAN1Q8IWY9 1227 aa29.34■■■□□ 2.29
PFDN2-201ENST00000368010 RHPN1Q8TCX5 695 aa29.34■■■□□ 2.29
PFDN2-201ENST00000368010 TLR7Q9NYK1 1049 aaKnown RBP29.34■■■□□ 2.29
PFDN2-201ENST00000368010 GAKO14976 1311 aa29.34■■■□□ 2.29
PFDN2-201ENST00000368010 CA12O43570 354 aa29.33■■■□□ 2.29
PFDN2-201ENST00000368010 IREB2P48200 963 aaKnown RBP29.33■■■□□ 2.29
PFDN2-201ENST00000368010 RRP1P56182 461 aaKnown RBP29.33■■■□□ 2.29
PFDN2-201ENST00000368010 TBC1D9Q6ZT07 1266 aa29.33■■■□□ 2.29
PFDN2-201ENST00000368010 AACSQ86V21 672 aa29.33■■■□□ 2.29
PFDN2-201ENST00000368010 HSPA8P11142 646 aaKnown RBP29.32■■■□□ 2.28
PFDN2-201ENST00000368010 MECOMQ03112 1051 aa29.32■■■□□ 2.28
PFDN2-201ENST00000368010 KIF1BPQ96EK5 621 aa29.32■■■□□ 2.28
PFDN2-201ENST00000368010 IL1RAPL2Q9NP60 686 aa29.32■■■□□ 2.28
PFDN2-201ENST00000368010 SNRKQ9NRH2 765 aa29.32■■■□□ 2.28
PFDN2-201ENST00000368010 USP40Q9NVE5 1235 aa29.32■■■□□ 2.28
PFDN2-201ENST00000368010 RPAP1Q9BWH6 1393 aaPredicted RBP29.31■■■□□ 2.28
PFDN2-201ENST00000368010 UNCXA6NJT0 531 aa29.31■■■□□ 2.28
PFDN2-201ENST00000368010 USP2O75604 605 aaPredicted RBP29.31■■■□□ 2.28
PFDN2-201ENST00000368010 LBX1P52954 281 aa29.31■■■□□ 2.28
PFDN2-201ENST00000368010 COL13A1Q5TAT6 717 aaPredicted RBP29.31■■■□□ 2.28
PFDN2-201ENST00000368010 REM2Q8IYK8 340 aaPredicted RBP29.31■■■□□ 2.28
PFDN2-201ENST00000368010 FAM163AQ96GL9 167 aaPredicted RBP29.31■■■□□ 2.28
PFDN2-201ENST00000368010 PRDM10Q9NQV6 1147 aa29.31■■■□□ 2.28
PFDN2-201ENST00000368010 RAI14Q9P0K7 980 aa29.31■■■□□ 2.28
PFDN2-201ENST00000368010 MROH7-TTC4A0A0A0MT08 1334 aa29.3■■■□□ 2.28
PFDN2-201ENST00000368010 APBB1O00213 710 aa29.3■■■□□ 2.28
PFDN2-201ENST00000368010 RAB11FIP3O75154 756 aa29.3■■■□□ 2.28
PFDN2-201ENST00000368010 GSTO1P78417 241 aa29.3■■■□□ 2.28
PFDN2-201ENST00000368010 HOOK2Q96ED9 719 aa29.3■■■□□ 2.28
PFDN2-201ENST00000368010 LRP2BPQ9P2M1 347 aa29.3■■■□□ 2.28
PFDN2-201ENST00000368010 ANKRD13AQ8IZ07 590 aa29.29■■■□□ 2.28
PFDN2-201ENST00000368010 CLASRPQ8N2M8 674 aaKnown RBP29.29■■■□□ 2.28
PFDN2-201ENST00000368010 FAM151AQ8WW52 585 aa29.29■■■□□ 2.28
PFDN2-201ENST00000368010 NSUN4Q96CB9 384 aaKnown RBP29.29■■■□□ 2.28
PFDN2-201ENST00000368010 LDHCP07864 332 aa29.28■■■□□ 2.28
PFDN2-201ENST00000368010 BTDP43251 543 aa29.28■■■□□ 2.28
PFDN2-201ENST00000368010 NFIAQ12857 509 aa29.28■■■□□ 2.28
PFDN2-201ENST00000368010 SLC10A4Q96EP9 437 aa29.28■■■□□ 2.28
PFDN2-201ENST00000368010 CSRNP1Q96S65 589 aa29.28■■■□□ 2.28
PFDN2-201ENST00000368010 MYH2Q9UKX2 1941 aa29.28■■■□□ 2.28
PFDN2-201ENST00000368010 TCP10Q12799 353 aa29.27■■■□□ 2.28
PFDN2-201ENST00000368010 ZNF384Q8TF68 577 aa29.27■■■□□ 2.28
PFDN2-201ENST00000368010 CLMNQ96JQ2 1002 aa29.27■■■□□ 2.28
PFDN2-201ENST00000368010 ZBTB4Q9P1Z0 1013 aaPredicted RBP29.27■■■□□ 2.28
PFDN2-201ENST00000368010 ZAP70P43403 619 aa29.26■■■□□ 2.27
PFDN2-201ENST00000368010 MKRN3Q13064 507 aaKnown RBP29.26■■■□□ 2.27
PFDN2-201ENST00000368010 TSKSQ9UJT2 592 aa29.26■■■□□ 2.27
PFDN2-201ENST00000368010 GPR75-ASB3A0A0A6YYF3 556 aa29.25■■■□□ 2.27
PFDN2-201ENST00000368010 CYP2E1P05181 493 aaPredicted RBP29.25■■■□□ 2.27
PFDN2-201ENST00000368010 SPRYD7Q5W111 196 aa29.25■■■□□ 2.27
PFDN2-201ENST00000368010 IDI2Q9BXS1 227 aa29.25■■■□□ 2.27
PFDN2-201ENST00000368010 FAM198AQ9UFP1 575 aa29.25■■■□□ 2.27
PFDN2-201ENST00000368010 DCAF15Q66K64 600 aa29.24■■■□□ 2.27
PFDN2-201ENST00000368010 SAGE1Q9NXZ1 904 aa29.24■■■□□ 2.27
PFDN2-201ENST00000368010 AKAP11Q9UKA4 1901 aa29.24■■■□□ 2.27
PFDN2-201ENST00000368010 IGSF3O75054 1194 aa29.23■■■□□ 2.27
PFDN2-201ENST00000368010 IFIT2P09913 472 aaKnown RBP29.23■■■□□ 2.27
PFDN2-201ENST00000368010 RFX7Q2KHR2 1363 aa29.23■■■□□ 2.27
PFDN2-201ENST00000368010 ENTPD3O75355 529 aa29.22■■■□□ 2.27
PFDN2-201ENST00000368010 ZBTB48P10074 688 aaPredicted RBP29.22■■■□□ 2.27
PFDN2-201ENST00000368010 RGS3P49796 1198 aa29.22■■■□□ 2.27
PFDN2-201ENST00000368010 MAP3K9P80192 1104 aa29.22■■■□□ 2.27
PFDN2-201ENST00000368010 SREBF2Q12772 1141 aa29.22■■■□□ 2.27
PFDN2-201ENST00000368010 DDX55Q8NHQ9 600 aaKnown RBP eCLIP29.22■■■□□ 2.272e-6■■■■■ 29.8
PFDN2-201ENST00000368010 WNK4Q96J92 1243 aa29.22■■■□□ 2.27
PFDN2-201ENST00000368010 BCL11AQ9H165 835 aa29.22■■■□□ 2.27
PFDN2-201ENST00000368010 RNF186Q9NXI6 227 aa29.22■■■□□ 2.27
PFDN2-201ENST00000368010 MAST2Q6P0Q8 1798 aa29.21■■■□□ 2.27
PFDN2-201ENST00000368010 NAA16Q6N069 864 aaPredicted RBP29.21■■■□□ 2.27
PFDN2-201ENST00000368010 PIH1D3Q9NQM4 214 aaKnown RBP29.21■■■□□ 2.27
PFDN2-201ENST00000368010 WDHD1O75717 1129 aaPredicted RBP29.2■■■□□ 2.26
PFDN2-201ENST00000368010 MAP4K4O95819 1239 aaPredicted RBP29.2■■■□□ 2.26
PFDN2-201ENST00000368010 RHBDL3P58872 404 aa29.2■■■□□ 2.26
PFDN2-201ENST00000368010 PPP1R3FQ6ZSY5 799 aaPredicted RBP29.2■■■□□ 2.26
PFDN2-201ENST00000368010 NOL10Q9BSC4 688 aaKnown RBP29.2■■■□□ 2.26
PFDN2-201ENST00000368010 ELP3Q9H9T3 547 aa29.2■■■□□ 2.26
PFDN2-201ENST00000368010 CSADQ9Y600 493 aa29.2■■■□□ 2.26
PFDN2-201ENST00000368010 OTOFQ9HC10 1997 aa29.2■■■□□ 2.26
PFDN2-201ENST00000368010 TRPA1O75762 1119 aa29.19■■■□□ 2.26
PFDN2-201ENST00000368010 VGLL4Q14135 290 aa29.19■■■□□ 2.26
PFDN2-201ENST00000368010 TNS4Q8IZW8 715 aa29.19■■■□□ 2.26
PFDN2-201ENST00000368010 WRNIP1Q96S55 665 aa29.19■■■□□ 2.26
PFDN2-201ENST00000368010 ZNF341Q9BYN7 854 aa29.19■■■□□ 2.26
PFDN2-201ENST00000368010 LRRCC1Q9C099 1032 aa29.19■■■□□ 2.26
PFDN2-201ENST00000368010 MANSC4A6NHS7 340 aaPredicted RBP29.18■■■□□ 2.26
PFDN2-201ENST00000368010 TM4SF4P48230 202 aa29.18■■■□□ 2.26
PFDN2-201ENST00000368010 PICALMQ13492 652 aa29.18■■■□□ 2.26
PFDN2-201ENST00000368010 MIGA2Q7L4E1 593 aa29.18■■■□□ 2.26
PFDN2-201ENST00000368010 ZFPM1Q8IX07 1006 aa29.18■■■□□ 2.26
PFDN2-201ENST00000368010 IDH1O75874 414 aaKnown RBP29.17■■■□□ 2.26
PFDN2-201ENST00000368010 BAG3O95817 575 aa29.17■■■□□ 2.26
PFDN2-201ENST00000368010 ZSCAN29Q8IWY8 852 aaPredicted RBP29.17■■■□□ 2.26
PFDN2-201ENST00000368010 NDUFB9Q9Y6M9 179 aa29.17■■■□□ 2.26
PFDN2-201ENST00000368010 PPIL4Q8WUA2 492 aaKnown RBP eCLIP29.16■■■□□ 2.26
PFDN2-201ENST00000368010 OPTNQ96CV9 577 aa29.16■■■□□ 2.26
PFDN2-201ENST00000368010 CRBNQ96SW2 442 aa29.16■■■□□ 2.26
PFDN2-201ENST00000368010 DDX4Q9NQI0 724 aaKnown RBP29.16■■■□□ 2.26
PFDN2-201ENST00000368010 NPM3O75607 178 aaKnown RBP29.15■■■□□ 2.26
PFDN2-201ENST00000368010 INHBEP58166 350 aa29.15■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms