RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 GPR25O00155 361 aa16.94■□□□□ 0.3
TNFRSF1A-202ENST00000366159 IGF2BP3O00425 579 aaKnown RBP eCLIP16.94■□□□□ 0.3
TNFRSF1A-202ENST00000366159 ALDH1A1P00352 501 aa16.94■□□□□ 0.3
TNFRSF1A-202ENST00000366159 MAP3K9P80192 1104 aa16.94■□□□□ 0.3
TNFRSF1A-202ENST00000366159 ATP8B2P98198 1209 aa16.94■□□□□ 0.3
TNFRSF1A-202ENST00000366159 CTU1Q7Z7A3 348 aaKnown RBP16.94■□□□□ 0.3
TNFRSF1A-202ENST00000366159 SSH3Q8TE77 659 aa16.94■□□□□ 0.3
TNFRSF1A-202ENST00000366159 MS4A4AQ96JQ5 239 aa16.94■□□□□ 0.3
TNFRSF1A-202ENST00000366159 PTPN18Q99952 460 aa16.94■□□□□ 0.3
TNFRSF1A-202ENST00000366159 RGS19P49795 217 aa16.93■□□□□ 0.3
TNFRSF1A-202ENST00000366159 VGLL4Q14135 290 aa16.93■□□□□ 0.3
TNFRSF1A-202ENST00000366159 FAM151AQ8WW52 585 aa16.93■□□□□ 0.3
TNFRSF1A-202ENST00000366159 FAM163AQ96GL9 167 aaPredicted RBP16.93■□□□□ 0.3
TNFRSF1A-202ENST00000366159 ELP3Q9H9T3 547 aa16.93■□□□□ 0.3
TNFRSF1A-202ENST00000366159 TMOD2Q9NZR1 351 aa16.93■□□□□ 0.3
TNFRSF1A-202ENST00000366159 GAKO14976 1311 aa16.92■□□□□ 0.3
TNFRSF1A-202ENST00000366159 NFIAQ12857 509 aa16.92■□□□□ 0.3
TNFRSF1A-202ENST00000366159 MVPQ14764 893 aaKnown RBP16.92■□□□□ 0.3
TNFRSF1A-202ENST00000366159 ZGPATQ8N5A5 531 aaKnown RBP16.92■□□□□ 0.3
TNFRSF1A-202ENST00000366159 OPTNQ96CV9 577 aa16.92■□□□□ 0.3
TNFRSF1A-202ENST00000366159 FAM198AQ9UFP1 575 aa16.92■□□□□ 0.3
TNFRSF1A-202ENST00000366159 CCDC85CA6NKD9 419 aa16.91■□□□□ 0.3
TNFRSF1A-202ENST00000366159 ARID4AP29374 1257 aaPredicted RBP16.91■□□□□ 0.3
TNFRSF1A-202ENST00000366159 G3BP1Q13283 466 aaKnown RBP eCLIP16.91■□□□□ 0.3
TNFRSF1A-202ENST00000366159 ZNF384Q8TF68 577 aa16.91■□□□□ 0.3
TNFRSF1A-202ENST00000366159 SNCAIPQ9Y6H5 919 aa16.91■□□□□ 0.3
TNFRSF1A-202ENST00000366159 MYH2Q9UKX2 1941 aa16.9■□□□□ 0.3
TNFRSF1A-202ENST00000366159 RFX7Q2KHR2 1363 aa16.9■□□□□ 0.3
TNFRSF1A-202ENST00000366159 HOOK2Q96ED9 719 aa16.9■□□□□ 0.3
TNFRSF1A-202ENST00000366159 NEUROD6Q96NK8 337 aa16.9■□□□□ 0.3
TNFRSF1A-202ENST00000366159 IDI2Q9BXS1 227 aa16.9■□□□□ 0.3
TNFRSF1A-202ENST00000366159 GPR108Q9NPR9 543 aa16.9■□□□□ 0.3
TNFRSF1A-202ENST00000366159 USP40Q9NVE5 1235 aa16.9■□□□□ 0.3
TNFRSF1A-202ENST00000366159 HMG20BQ9P0W2 317 aa16.9■□□□□ 0.3
TNFRSF1A-202ENST00000366159 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.9■□□□□ 0.3
TNFRSF1A-202ENST00000366159 ZNF112Q9UJU3 913 aa16.9■□□□□ 0.3
TNFRSF1A-202ENST00000366159 NOP58Q9Y2X3 529 aaKnown RBP16.9■□□□□ 0.3
TNFRSF1A-202ENST00000366159 SPDYE5A6NIY4 337 aa16.89■□□□□ 0.29
TNFRSF1A-202ENST00000366159 PKN2Q16513 984 aaKnown RBP16.89■□□□□ 0.29
TNFRSF1A-202ENST00000366159 FTSJ3Q8IY81 847 aaKnown RBP16.89■□□□□ 0.29
TNFRSF1A-202ENST00000366159 HTTP42858 3142 aa16.89■□□□□ 0.29
TNFRSF1A-202ENST00000366159 ATRNL1Q5VV63 1379 aa16.88■□□□□ 0.29
TNFRSF1A-202ENST00000366159 FKTNO75072 461 aa16.88■□□□□ 0.29
TNFRSF1A-202ENST00000366159 DCAF15Q66K64 600 aa16.88■□□□□ 0.29
TNFRSF1A-202ENST00000366159 SPTY2D1Q68D10 685 aaPredicted RBP16.88■□□□□ 0.29
TNFRSF1A-202ENST00000366159 PI16Q6UXB8 463 aa16.88■□□□□ 0.29
TNFRSF1A-202ENST00000366159 ZFPM1Q8IX07 1006 aa16.88■□□□□ 0.29
TNFRSF1A-202ENST00000366159 SPATA5Q8NB90 893 aa16.88■□□□□ 0.29
TNFRSF1A-202ENST00000366159 ZKSCAN4Q969J2 545 aaPredicted RBP16.88■□□□□ 0.29
TNFRSF1A-202ENST00000366159 WRNIP1Q96S55 665 aa16.88■□□□□ 0.29
TNFRSF1A-202ENST00000366159 C1orf115Q9H7X2 142 aa16.88■□□□□ 0.29
TNFRSF1A-202ENST00000366159 CSADQ9Y600 493 aa16.88■□□□□ 0.29
TNFRSF1A-202ENST00000366159 MCAMP43121 646 aa16.87■□□□□ 0.29
TNFRSF1A-202ENST00000366159 MAP3K10Q02779 954 aa16.87■□□□□ 0.29
TNFRSF1A-202ENST00000366159 MECOMQ03112 1051 aa16.87■□□□□ 0.29
TNFRSF1A-202ENST00000366159 TCP10Q12799 353 aa16.87■□□□□ 0.29
TNFRSF1A-202ENST00000366159 MIGA2Q7L4E1 593 aa16.87■□□□□ 0.29
TNFRSF1A-202ENST00000366159 ERO1BQ86YB8 467 aa16.87■□□□□ 0.29
TNFRSF1A-202ENST00000366159 ITPRIPQ8IWB1 547 aa16.87■□□□□ 0.29
TNFRSF1A-202ENST00000366159 BRI3BPQ8WY22 251 aa16.87■□□□□ 0.29
TNFRSF1A-202ENST00000366159 ZNF341Q9BYN7 854 aa16.87■□□□□ 0.29
TNFRSF1A-202ENST00000366159 ABCF2Q9UG63 623 aa16.87■□□□□ 0.29
TNFRSF1A-202ENST00000366159 TNRC18O15417 2968 aaPredicted RBP16.86■□□□□ 0.29
TNFRSF1A-202ENST00000366159 GPR75-ASB3A0A0A6YYF3 556 aa16.86■□□□□ 0.29
TNFRSF1A-202ENST00000366159 ENTPD3O75355 529 aa16.86■□□□□ 0.29
TNFRSF1A-202ENST00000366159 WDHD1O75717 1129 aaPredicted RBP16.86■□□□□ 0.29
TNFRSF1A-202ENST00000366159 GTF2A2P52657 109 aa16.86■□□□□ 0.29
TNFRSF1A-202ENST00000366159 CRHR2Q13324 411 aa16.86■□□□□ 0.29
TNFRSF1A-202ENST00000366159 TNNI3KQ59H18 835 aa16.86■□□□□ 0.29
TNFRSF1A-202ENST00000366159 OTUD7BQ6GQQ9 843 aa16.86■□□□□ 0.29
TNFRSF1A-202ENST00000366159 SH3BP5LQ7L8J4 393 aa16.86■□□□□ 0.29
TNFRSF1A-202ENST00000366159 SLF2Q8IX21 1173 aa16.86■□□□□ 0.29
TNFRSF1A-202ENST00000366159 NSUN4Q96CB9 384 aaKnown RBP16.86■□□□□ 0.29
TNFRSF1A-202ENST00000366159 OTUD5Q96G74 571 aa16.86■□□□□ 0.29
TNFRSF1A-202ENST00000366159 FPGT-TNNI3KV9GXZ4 949 aa16.86■□□□□ 0.29
TNFRSF1A-202ENST00000366159 MROH7-TTC4A0A0A0MT08 1334 aa16.85■□□□□ 0.29
TNFRSF1A-202ENST00000366159 SURF6O75683 361 aaKnown RBP16.85■□□□□ 0.29
TNFRSF1A-202ENST00000366159 INPP5BP32019 993 aa16.85■□□□□ 0.29
TNFRSF1A-202ENST00000366159 RGS3P49796 1198 aa16.85■□□□□ 0.29
TNFRSF1A-202ENST00000366159 RHBDL3P58872 404 aa16.85■□□□□ 0.29
TNFRSF1A-202ENST00000366159 CEP85Q6P2H3 762 aa16.85■□□□□ 0.29
TNFRSF1A-202ENST00000366159 TBC1D9Q6ZT07 1266 aa16.85■□□□□ 0.29
TNFRSF1A-202ENST00000366159 ERICH6Q7L0X2 663 aa16.85■□□□□ 0.29
TNFRSF1A-202ENST00000366159 DZIP1Q86YF9 867 aaKnown RBP16.85■□□□□ 0.29
TNFRSF1A-202ENST00000366159 PANK1Q8TE04 598 aa16.85■□□□□ 0.29
TNFRSF1A-202ENST00000366159 DDX4Q9NQI0 724 aaKnown RBP16.85■□□□□ 0.29
TNFRSF1A-202ENST00000366159 HPS5Q9UPZ3 1129 aa16.85■□□□□ 0.29
TNFRSF1A-202ENST00000366159 CCL15-CCL14A0A0B4J2E2 113 aa16.84■□□□□ 0.29
TNFRSF1A-202ENST00000366159 PHF20L1A8MW92 1017 aa16.84■□□□□ 0.29
TNFRSF1A-202ENST00000366159 IRF6O14896 467 aa16.84■□□□□ 0.29
TNFRSF1A-202ENST00000366159 UQCRFS1P1P0C7P4 283 aa16.84■□□□□ 0.29
TNFRSF1A-202ENST00000366159 BTDP43251 543 aa16.84■□□□□ 0.29
TNFRSF1A-202ENST00000366159 PPATQ06203 517 aa16.84■□□□□ 0.29
TNFRSF1A-202ENST00000366159 PPIL2Q13356 520 aa16.84■□□□□ 0.29
TNFRSF1A-202ENST00000366159 CCL15Q16663 113 aa16.84■□□□□ 0.29
TNFRSF1A-202ENST00000366159 NOL9Q5SY16 702 aaKnown RBP16.84■□□□□ 0.29
TNFRSF1A-202ENST00000366159 GORABQ5T7V8 394 aa16.84■□□□□ 0.29
TNFRSF1A-202ENST00000366159 FAM43AQ8N2R8 423 aa16.84■□□□□ 0.29
TNFRSF1A-202ENST00000366159 ZNF512BQ96KM6 892 aaPredicted RBP16.84■□□□□ 0.29
TNFRSF1A-202ENST00000366159 DBNDD2Q9BQY9 259 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms