RNA–Protein interactions for RNA: ENST00000356936.5

NCL-202, Transcript of nucleolin, humanhuman

TSL 3

Gene NCL, Length 890 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-202ENST00000356936 ANKRD13AQ8IZ07 590 aa21.1■□□□□ 0.97
NCL-202ENST00000356936 HMG20BQ9P0W2 317 aa21.1■□□□□ 0.97
NCL-202ENST00000356936 USP2O75604 605 aaPredicted RBP21.09■□□□□ 0.97
NCL-202ENST00000356936 TTC39AQ5SRH9 613 aa21.09■□□□□ 0.97
NCL-202ENST00000356936 FZD1Q9UP38 647 aa21.09■□□□□ 0.97
NCL-202ENST00000356936 GSTO1P78417 241 aa21.08■□□□□ 0.97
NCL-202ENST00000356936 SREBF2Q12772 1141 aa21.08■□□□□ 0.97
NCL-202ENST00000356936 SPRYD7Q5W111 196 aa21.08■□□□□ 0.97
NCL-202ENST00000356936 CDC42EP5Q6NZY7 148 aa21.08■□□□□ 0.97
NCL-202ENST00000356936 FAM163AQ96GL9 167 aaPredicted RBP21.08■□□□□ 0.97
NCL-202ENST00000356936 USP40Q9NVE5 1235 aa21.08■□□□□ 0.97
NCL-202ENST00000356936 RPAP1Q9BWH6 1393 aaPredicted RBP21.08■□□□□ 0.96
NCL-202ENST00000356936 GAKO14976 1311 aa21.07■□□□□ 0.96
NCL-202ENST00000356936 ZBTB48P10074 688 aaPredicted RBP21.07■□□□□ 0.96
NCL-202ENST00000356936 MCAMP43121 646 aa21.07■□□□□ 0.96
NCL-202ENST00000356936 FAM151AQ8WW52 585 aa21.07■□□□□ 0.96
NCL-202ENST00000356936 ZNF512BQ96KM6 892 aaPredicted RBP21.07■□□□□ 0.96
NCL-202ENST00000356936 DBNDD2Q9BQY9 259 aa21.07■□□□□ 0.96
NCL-202ENST00000356936 RNF186Q9NXI6 227 aa21.07■□□□□ 0.96
NCL-202ENST00000356936 TSKSQ9UJT2 592 aa21.07■□□□□ 0.96
NCL-202ENST00000356936 EXOC6BQ9Y2D4 811 aa21.07■□□□□ 0.96
NCL-202ENST00000356936 IGSF3O75054 1194 aa21.06■□□□□ 0.96
NCL-202ENST00000356936 LDHCP07864 332 aa21.06■□□□□ 0.96
NCL-202ENST00000356936 TM4SF4P48230 202 aa21.06■□□□□ 0.96
NCL-202ENST00000356936 MECOMQ03112 1051 aa21.06■□□□□ 0.96
NCL-202ENST00000356936 DCAF15Q66K64 600 aa21.06■□□□□ 0.96
NCL-202ENST00000356936 TRPA1O75762 1119 aa21.05■□□□□ 0.96
NCL-202ENST00000356936 INHBEP58166 350 aa21.05■□□□□ 0.96
NCL-202ENST00000356936 MKRN3Q13064 507 aaKnown RBP21.05■□□□□ 0.96
NCL-202ENST00000356936 PI16Q6UXB8 463 aa21.05■□□□□ 0.96
NCL-202ENST00000356936 CDAN1Q8IWY9 1227 aa21.05■□□□□ 0.96
NCL-202ENST00000356936 CLMNQ96JQ2 1002 aa21.05■□□□□ 0.96
NCL-202ENST00000356936 RAI14Q9P0K7 980 aa21.05■□□□□ 0.96
NCL-202ENST00000356936 LRP2BPQ9P2M1 347 aa21.05■□□□□ 0.96
NCL-202ENST00000356936 MROH7-TTC4A0A0A0MT08 1334 aa21.04■□□□□ 0.96
NCL-202ENST00000356936 MANSC4A6NHS7 340 aaPredicted RBP21.04■□□□□ 0.96
NCL-202ENST00000356936 C20orf194Q5TEA3 1177 aa21.04■□□□□ 0.96
NCL-202ENST00000356936 EAF2Q96CJ1 260 aaPredicted RBP21.04■□□□□ 0.96
NCL-202ENST00000356936 WNK4Q96J92 1243 aa21.04■□□□□ 0.96
NCL-202ENST00000356936 DBNLQ9UJU6 430 aaKnown RBP21.04■□□□□ 0.96
NCL-202ENST00000356936 CSADQ9Y600 493 aa21.04■□□□□ 0.96
NCL-202ENST00000356936 MAP4K4O95819 1239 aaPredicted RBP21.03■□□□□ 0.96
NCL-202ENST00000356936 MAP3K9P80192 1104 aa21.03■□□□□ 0.96
NCL-202ENST00000356936 TCP10Q12799 353 aa21.03■□□□□ 0.96
NCL-202ENST00000356936 TBC1D9Q6ZT07 1266 aa21.03■□□□□ 0.96
NCL-202ENST00000356936 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.03■□□□□ 0.96
NCL-202ENST00000356936 RHPN1Q8TCX5 695 aa21.03■□□□□ 0.96
NCL-202ENST00000356936 NSUN4Q96CB9 384 aaKnown RBP21.03■□□□□ 0.96
NCL-202ENST00000356936 KIF1BPQ96EK5 621 aa21.03■□□□□ 0.96
NCL-202ENST00000356936 IDI2Q9BXS1 227 aa21.03■□□□□ 0.96
NCL-202ENST00000356936 CCDC8Q9H0W5 538 aaPredicted RBP21.03■□□□□ 0.96
NCL-202ENST00000356936 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.03■□□□□ 0.96
NCL-202ENST00000356936 GPR75-ASB3A0A0A6YYF3 556 aa21.02■□□□□ 0.96
NCL-202ENST00000356936 RAB11FIP3O75154 756 aa21.02■□□□□ 0.96
NCL-202ENST00000356936 ENTPD3O75355 529 aa21.02■□□□□ 0.96
NCL-202ENST00000356936 BTDP43251 543 aa21.02■□□□□ 0.96
NCL-202ENST00000356936 NFIAQ12857 509 aa21.02■□□□□ 0.96
NCL-202ENST00000356936 AACSQ86V21 672 aa21.02■□□□□ 0.96
NCL-202ENST00000356936 CLASRPQ8N2M8 674 aaKnown RBP21.02■□□□□ 0.96
NCL-202ENST00000356936 ALDH1A1P00352 501 aa21.01■□□□□ 0.95
NCL-202ENST00000356936 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.01■□□□□ 0.95
NCL-202ENST00000356936 SIRT2Q8IXJ6 389 aa21.01■□□□□ 0.95
NCL-202ENST00000356936 NOL10Q9BSC4 688 aaKnown RBP21.01■□□□□ 0.95
NCL-202ENST00000356936 ZNF341Q9BYN7 854 aa21.01■□□□□ 0.95
NCL-202ENST00000356936 ELP3Q9H9T3 547 aa21.01■□□□□ 0.95
NCL-202ENST00000356936 SNRKQ9NRH2 765 aa21.01■□□□□ 0.95
NCL-202ENST00000356936 TLR7Q9NYK1 1049 aaKnown RBP21.01■□□□□ 0.95
NCL-202ENST00000356936 FAM198AQ9UFP1 575 aa21.01■□□□□ 0.95
NCL-202ENST00000356936 VGLL4Q14135 290 aa21■□□□□ 0.95
NCL-202ENST00000356936 OPTNQ96CV9 577 aa21■□□□□ 0.95
NCL-202ENST00000356936 YTHDC1Q96MU7 727 aaKnown RBP21■□□□□ 0.95
NCL-202ENST00000356936 WRNIP1Q96S55 665 aa21■□□□□ 0.95
NCL-202ENST00000356936 RGS3P49796 1198 aa20.99■□□□□ 0.95
NCL-202ENST00000356936 ZNF384Q8TF68 577 aa20.99■□□□□ 0.95
NCL-202ENST00000356936 AKAP11Q9UKA4 1901 aa20.99■□□□□ 0.95
NCL-202ENST00000356936 MYH2Q9UKX2 1941 aa20.99■□□□□ 0.95
NCL-202ENST00000356936 NPM3O75607 178 aaKnown RBP20.98■□□□□ 0.95
NCL-202ENST00000356936 CYP2E1P05181 493 aaPredicted RBP20.98■□□□□ 0.95
NCL-202ENST00000356936 ZAP70P43403 619 aa20.98■□□□□ 0.95
NCL-202ENST00000356936 OTUD7BQ6GQQ9 843 aa20.98■□□□□ 0.95
NCL-202ENST00000356936 NAA16Q6N069 864 aaPredicted RBP20.98■□□□□ 0.95
NCL-202ENST00000356936 MIGA2Q7L4E1 593 aa20.98■□□□□ 0.95
NCL-202ENST00000356936 IL1RAPL2Q9NP60 686 aa20.98■□□□□ 0.95
NCL-202ENST00000356936 RFX7Q2KHR2 1363 aa20.97■□□□□ 0.95
NCL-202ENST00000356936 APBB1O00213 710 aa20.97■□□□□ 0.95
NCL-202ENST00000356936 WDHD1O75717 1129 aaPredicted RBP20.97■□□□□ 0.95
NCL-202ENST00000356936 BAG3O95817 575 aa20.97■□□□□ 0.95
NCL-202ENST00000356936 IFIT2P09913 472 aaKnown RBP20.97■□□□□ 0.95
NCL-202ENST00000356936 PLCG2P16885 1265 aa20.97■□□□□ 0.95
NCL-202ENST00000356936 TMED8Q6PL24 325 aaPredicted RBP20.97■□□□□ 0.95
NCL-202ENST00000356936 IFNL1Q8IU54 200 aa20.97■□□□□ 0.95
NCL-202ENST00000356936 ZSCAN29Q8IWY8 852 aaPredicted RBP20.97■□□□□ 0.95
NCL-202ENST00000356936 CFHR5Q9BXR6 569 aa20.97■□□□□ 0.95
NCL-202ENST00000356936 SPDYE5A6NIY4 337 aa20.96■□□□□ 0.95
NCL-202ENST00000356936 GTF2A2P52657 109 aa20.96■□□□□ 0.95
NCL-202ENST00000356936 RHBDL3P58872 404 aa20.96■□□□□ 0.95
NCL-202ENST00000356936 PICALMQ13492 652 aa20.96■□□□□ 0.95
NCL-202ENST00000356936 NOM1Q5C9Z4 860 aaKnown RBP20.96■□□□□ 0.95
NCL-202ENST00000356936 ERO1BQ86YB8 467 aa20.96■□□□□ 0.95
NCL-202ENST00000356936 TBC1D8O95759 1140 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms