RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 GPATCH11Q8N954 259 aa7.25□□□□□ -1.25
UPF2-201ENST00000356352 IQCDQ96DY2 449 aa7.25□□□□□ -1.25
UPF2-201ENST00000356352 MEIS3Q99687 375 aa7.25□□□□□ -1.25
UPF2-201ENST00000356352 DEXIO95424 95 aa7.24□□□□□ -1.25
UPF2-201ENST00000356352 TNFAIP3P21580 790 aa7.24□□□□□ -1.25
UPF2-201ENST00000356352 ZNF569Q5MCW4 686 aa7.24□□□□□ -1.25
UPF2-201ENST00000356352 CREB3L3Q68CJ9 461 aa7.24□□□□□ -1.25
UPF2-201ENST00000356352 RPUSD2Q8IZ73 545 aaKnown RBP7.24□□□□□ -1.25
UPF2-201ENST00000356352 FAM114A2Q9NRY5 505 aa7.24□□□□□ -1.25
UPF2-201ENST00000356352 TTF2Q9UNY4 1162 aaKnown RBP7.24□□□□□ -1.25
UPF2-201ENST00000356352 URB2Q14146 1524 aaKnown RBP7.24□□□□□ -1.25
UPF2-201ENST00000356352 VIMP08670 466 aaKnown RBP7.24□□□□□ -1.25
UPF2-201ENST00000356352 MYL5Q02045 173 aa7.24□□□□□ -1.25
UPF2-201ENST00000356352 BIRC3Q13489 604 aa7.24□□□□□ -1.25
UPF2-201ENST00000356352 TRPC3Q13507 836 aa7.24□□□□□ -1.25
UPF2-201ENST00000356352 PPP2R5BQ15173 497 aa7.24□□□□□ -1.25
UPF2-201ENST00000356352 DCAF17Q5H9S7 520 aaPredicted RBP7.24□□□□□ -1.25
UPF2-201ENST00000356352 TSHZ3Q63HK5 1081 aa7.24□□□□□ -1.25
UPF2-201ENST00000356352 RNF216Q9NWF9 866 aaPredicted RBP7.24□□□□□ -1.25
UPF2-201ENST00000356352 DISP3Q9P2K9 1392 aa7.24□□□□□ -1.25
UPF2-201ENST00000356352 ITSN2Q9NZM3 1697 aa7.24□□□□□ -1.25
UPF2-201ENST00000356352 CAPN2P17655 700 aa7.24□□□□□ -1.25
UPF2-201ENST00000356352 RAPGEF1Q13905 1077 aa7.24□□□□□ -1.25
UPF2-201ENST00000356352 CHRNA2Q15822 529 aa7.24□□□□□ -1.25
UPF2-201ENST00000356352 RBM26Q5T8P6 1007 aaKnown RBP7.24□□□□□ -1.25
UPF2-201ENST00000356352 TTC16Q8NEE8 873 aa7.24□□□□□ -1.25
UPF2-201ENST00000356352 NSMCE1Q8WV22 266 aa7.24□□□□□ -1.25
UPF2-201ENST00000356352 TBC1D31Q96DN5 1066 aa7.24□□□□□ -1.25
UPF2-201ENST00000356352 LZTS2Q9BRK4 669 aa7.24□□□□□ -1.25
UPF2-201ENST00000356352 LRRC2Q9BYS8 371 aa7.24□□□□□ -1.25
UPF2-201ENST00000356352 BABAM1Q9NWV8 329 aa7.24□□□□□ -1.25
UPF2-201ENST00000356352 CCT6AP40227 531 aaKnown RBP7.24□□□□□ -1.25
UPF2-201ENST00000356352 DNM1Q05193 864 aaKnown RBP7.24□□□□□ -1.25
UPF2-201ENST00000356352 CCDC125Q86Z20 511 aa7.24□□□□□ -1.25
UPF2-201ENST00000356352 SUPT20HQ8NEM7 779 aa7.24□□□□□ -1.25
UPF2-201ENST00000356352 WDR66Q8TBY9 1149 aa7.24□□□□□ -1.25
UPF2-201ENST00000356352 IPO4Q8TEX9 1081 aaKnown RBP7.24□□□□□ -1.25
UPF2-201ENST00000356352 LEO1Q8WVC0 666 aaPredicted RBP7.24□□□□□ -1.25
UPF2-201ENST00000356352 MAIP1Q8WWC4 291 aa7.24□□□□□ -1.25
UPF2-201ENST00000356352 RNF34Q969K3 372 aa7.24□□□□□ -1.25
UPF2-201ENST00000356352 RSRC1Q96IZ7 334 aaKnown RBP7.24□□□□□ -1.25
UPF2-201ENST00000356352 NOC4LQ9BVI4 516 aaKnown RBP7.24□□□□□ -1.25
UPF2-201ENST00000356352 USH1CQ9Y6N9 552 aa7.24□□□□□ -1.25
UPF2-201ENST00000356352 SPOPO43791 374 aa7.23□□□□□ -1.25
UPF2-201ENST00000356352 ITIH3Q06033 890 aa7.23□□□□□ -1.25
UPF2-201ENST00000356352 ASIC2Q16515 512 aa7.23□□□□□ -1.25
UPF2-201ENST00000356352 CYP26C1Q6V0L0 522 aa7.23□□□□□ -1.25
UPF2-201ENST00000356352 CACNA2D3Q8IZS8 1091 aa7.23□□□□□ -1.25
UPF2-201ENST00000356352 UBLCP1Q8WVY7 318 aaPredicted RBP7.23□□□□□ -1.25
UPF2-201ENST00000356352 IFT81Q8WYA0 676 aa7.23□□□□□ -1.25
UPF2-201ENST00000356352 CAPZA3Q96KX2 299 aa7.23□□□□□ -1.25
UPF2-201ENST00000356352 HAUS7Q99871 368 aa7.23□□□□□ -1.25
UPF2-201ENST00000356352 LLPHQ9BRT6 129 aaKnown RBP7.23□□□□□ -1.25
UPF2-201ENST00000356352 CACYBPQ9HB71 228 aaKnown RBP7.23□□□□□ -1.25
UPF2-201ENST00000356352 ZKSCAN5Q9Y2L8 839 aa7.23□□□□□ -1.25
UPF2-201ENST00000356352 UTP11Q9Y3A2 253 aaKnown RBP7.23□□□□□ -1.25
UPF2-201ENST00000356352 POLR3AO14802 1390 aaPredicted RBP7.23□□□□□ -1.25
UPF2-201ENST00000356352 GIPC1O14908 333 aa7.23□□□□□ -1.25
UPF2-201ENST00000356352 YWHAEP62258 255 aaKnown RBP7.23□□□□□ -1.25
UPF2-201ENST00000356352 ATP11AP98196 1134 aa7.23□□□□□ -1.25
UPF2-201ENST00000356352 LGSNQ5TDP6 509 aa7.23□□□□□ -1.25
UPF2-201ENST00000356352 B4GALNT4Q76KP1 1039 aa7.23□□□□□ -1.25
UPF2-201ENST00000356352 ZKSCAN3Q9BRR0 538 aa7.23□□□□□ -1.25
UPF2-201ENST00000356352 TFCP2L1Q9NZI6 479 aa7.23□□□□□ -1.25
UPF2-201ENST00000356352 TSKSQ9UJT2 592 aa7.23□□□□□ -1.25
UPF2-201ENST00000356352 NOD1Q9Y239 953 aa7.23□□□□□ -1.25
UPF2-201ENST00000356352 PDE6BP35913 854 aa7.23□□□□□ -1.25
UPF2-201ENST00000356352 GTF2A1P52655 376 aaPredicted RBP7.23□□□□□ -1.25
UPF2-201ENST00000356352 CCDC122Q5T0U0 273 aa7.23□□□□□ -1.25
UPF2-201ENST00000356352 CCDC25Q86WR0 208 aa7.23□□□□□ -1.25
UPF2-201ENST00000356352 ACSBG1Q96GR2 724 aa7.23□□□□□ -1.25
UPF2-201ENST00000356352 RAB3IPQ96QF0 476 aaPredicted RBP7.23□□□□□ -1.25
UPF2-201ENST00000356352 ZBTB21Q9ULJ3 1066 aa7.23□□□□□ -1.25
UPF2-201ENST00000356352 RIMS2Q9UQ26 1411 aa7.23□□□□□ -1.25
UPF2-201ENST00000356352 AOX1Q06278 1338 aa7.23□□□□□ -1.25
UPF2-201ENST00000356352 LPXNO60711 386 aa7.23□□□□□ -1.25
UPF2-201ENST00000356352 IGHDP01880 384 aa7.23□□□□□ -1.25
UPF2-201ENST00000356352 GEN1Q17RS7 908 aa7.23□□□□□ -1.25
UPF2-201ENST00000356352 SYCE1Q8N0S2 351 aa7.23□□□□□ -1.25
UPF2-201ENST00000356352 PLCD3Q8N3E9 789 aa7.23□□□□□ -1.25
UPF2-201ENST00000356352 ZNF830Q96NB3 372 aaPredicted RBP7.23□□□□□ -1.25
UPF2-201ENST00000356352 BAG1Q99933 345 aaPredicted RBP7.23□□□□□ -1.25
UPF2-201ENST00000356352 VCX3BQ9H321 246 aa7.23□□□□□ -1.25
UPF2-201ENST00000356352 PFDN4Q9NQP4 134 aa7.23□□□□□ -1.25
UPF2-201ENST00000356352 GPHNQ9NQX3 736 aaPredicted RBP7.23□□□□□ -1.25
UPF2-201ENST00000356352 IQSEC3Q9UPP2 1182 aaPredicted RBP7.23□□□□□ -1.25
UPF2-201ENST00000356352 TRAF5O00463 557 aa7.22□□□□□ -1.25
UPF2-201ENST00000356352 DAPK3O43293 454 aa7.22□□□□□ -1.25
UPF2-201ENST00000356352 KIF11P52732 1056 aa7.22□□□□□ -1.25
UPF2-201ENST00000356352 FAM160A1Q05DH4 1040 aa7.22□□□□□ -1.25
UPF2-201ENST00000356352 APOBRQ0VD83 1088 aa7.22□□□□□ -1.25
UPF2-201ENST00000356352 TEX11Q8IYF3 940 aa7.22□□□□□ -1.25
UPF2-201ENST00000356352 ARHGAP24Q8N264 748 aa7.22□□□□□ -1.25
UPF2-201ENST00000356352 MICALL1Q8N3F8 863 aa7.22□□□□□ -1.25
UPF2-201ENST00000356352 THOC2Q8NI27 1593 aaKnown RBP7.22□□□□□ -1.25
UPF2-201ENST00000356352 AK2P54819 239 aa7.22□□□□□ -1.25
UPF2-201ENST00000356352 RASA3Q14644 834 aa7.22□□□□□ -1.25
UPF2-201ENST00000356352 TRAPPC3LQ5T215 181 aa7.22□□□□□ -1.25
UPF2-201ENST00000356352 ZNF365Q70YC5 407 aa7.22□□□□□ -1.25
UPF2-201ENST00000356352 C10orf67Q8IYJ2 551 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms