RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 RFX7Q2KHR2 1363 aa20.71■□□□□ 0.91
PDLIM7-201ENST00000355572 ZSWIM8A7E2V4 1837 aa20.7■□□□□ 0.9
PDLIM7-201ENST00000355572 IREB2P48200 963 aaKnown RBP20.7■□□□□ 0.9
PDLIM7-201ENST00000355572 VGLL4Q14135 290 aa20.7■□□□□ 0.9
PDLIM7-201ENST00000355572 TBC1D9Q6ZT07 1266 aa20.7■□□□□ 0.9
PDLIM7-201ENST00000355572 ANKRD13AQ8IZ07 590 aa20.7■□□□□ 0.9
PDLIM7-201ENST00000355572 GAKO14976 1311 aa20.7■□□□□ 0.9
PDLIM7-201ENST00000355572 MCAMP43121 646 aa20.69■□□□□ 0.9
PDLIM7-201ENST00000355572 TNNI2P48788 182 aa20.69■□□□□ 0.9
PDLIM7-201ENST00000355572 TCP10Q12799 353 aa20.69■□□□□ 0.9
PDLIM7-201ENST00000355572 G3BP1Q13283 466 aaKnown RBP eCLIP20.69■□□□□ 0.9
PDLIM7-201ENST00000355572 CEP85Q6P2H3 762 aa20.69■□□□□ 0.9
PDLIM7-201ENST00000355572 FAM83AQ86UY5 434 aa20.69■□□□□ 0.9
PDLIM7-201ENST00000355572 PTPN18Q99952 460 aa20.69■□□□□ 0.9
PDLIM7-201ENST00000355572 DBNDD2Q9BQY9 259 aa20.69■□□□□ 0.9
PDLIM7-201ENST00000355572 TLR7Q9NYK1 1049 aaKnown RBP20.69■□□□□ 0.9
PDLIM7-201ENST00000355572 ABCF2Q9UG63 623 aa20.69■□□□□ 0.9
PDLIM7-201ENST00000355572 AKAP2Q9Y2D5 859 aa20.69■□□□□ 0.9
PDLIM7-201ENST00000355572 RPAP1Q9BWH6 1393 aaPredicted RBP20.69■□□□□ 0.9
PDLIM7-201ENST00000355572 SIPA1L1O43166 1804 aa20.69■□□□□ 0.9
PDLIM7-201ENST00000355572 ARID4AP29374 1257 aaPredicted RBP20.68■□□□□ 0.9
PDLIM7-201ENST00000355572 TNNI3KQ59H18 835 aa20.68■□□□□ 0.9
PDLIM7-201ENST00000355572 FKBP1CQ5VVH2 108 aa20.68■□□□□ 0.9
PDLIM7-201ENST00000355572 REM2Q8IYK8 340 aaPredicted RBP20.68■□□□□ 0.9
PDLIM7-201ENST00000355572 ZNF296Q8WUU4 475 aaPredicted RBP20.68■□□□□ 0.9
PDLIM7-201ENST00000355572 OPTNQ96CV9 577 aa20.68■□□□□ 0.9
PDLIM7-201ENST00000355572 SNCAIPQ9Y6H5 919 aa20.68■□□□□ 0.9
PDLIM7-201ENST00000355572 FPGT-TNNI3KV9GXZ4 949 aa20.68■□□□□ 0.9
PDLIM7-201ENST00000355572 PDS5AQ29RF7 1337 aaKnown RBP20.68■□□□□ 0.9
PDLIM7-201ENST00000355572 PHIPQ8WWQ0 1821 aa20.67■□□□□ 0.9
PDLIM7-201ENST00000355572 SURF6O75683 361 aaKnown RBP20.67■□□□□ 0.9
PDLIM7-201ENST00000355572 ZBTB48P10074 688 aaPredicted RBP20.67■□□□□ 0.9
PDLIM7-201ENST00000355572 MVPQ14764 893 aaKnown RBP20.67■□□□□ 0.9
PDLIM7-201ENST00000355572 MIGA2Q7L4E1 593 aa20.67■□□□□ 0.9
PDLIM7-201ENST00000355572 IFNL1Q8IU54 200 aa20.67■□□□□ 0.9
PDLIM7-201ENST00000355572 ZKSCAN4Q969J2 545 aaPredicted RBP20.67■□□□□ 0.9
PDLIM7-201ENST00000355572 MS4A4AQ96JQ5 239 aa20.67■□□□□ 0.9
PDLIM7-201ENST00000355572 DDX4Q9NQI0 724 aaKnown RBP20.67■□□□□ 0.9
PDLIM7-201ENST00000355572 USP40Q9NVE5 1235 aa20.67■□□□□ 0.9
PDLIM7-201ENST00000355572 ATRNL1Q5VV63 1379 aa20.67■□□□□ 0.9
PDLIM7-201ENST00000355572 FOCADQ5VW36 1801 aa20.67■□□□□ 0.9
PDLIM7-201ENST00000355572 MAP3K9P80192 1104 aa20.66■□□□□ 0.9
PDLIM7-201ENST00000355572 CAP1Q01518 475 aa20.66■□□□□ 0.9
PDLIM7-201ENST00000355572 MECOMQ03112 1051 aa20.66■□□□□ 0.9
PDLIM7-201ENST00000355572 SREBF2Q12772 1141 aa20.66■□□□□ 0.9
PDLIM7-201ENST00000355572 C20orf194Q5TEA3 1177 aa20.66■□□□□ 0.9
PDLIM7-201ENST00000355572 SH3BP5LQ7L8J4 393 aa20.66■□□□□ 0.9
PDLIM7-201ENST00000355572 FAM151AQ8WW52 585 aa20.66■□□□□ 0.9
PDLIM7-201ENST00000355572 NOP58Q9Y2X3 529 aaKnown RBP20.66■□□□□ 0.9
PDLIM7-201ENST00000355572 PTPRFP10586 1907 aa20.65■□□□□ 0.9
PDLIM7-201ENST00000355572 MANSC4A6NHS7 340 aaPredicted RBP20.65■□□□□ 0.9
PDLIM7-201ENST00000355572 GPR25O00155 361 aa20.65■□□□□ 0.9
PDLIM7-201ENST00000355572 INPP5BP32019 993 aa20.65■□□□□ 0.9
PDLIM7-201ENST00000355572 SPATA5Q8NB90 893 aa20.65■□□□□ 0.9
PDLIM7-201ENST00000355572 SNRKQ9NRH2 765 aa20.65■□□□□ 0.9
PDLIM7-201ENST00000355572 TMOD2Q9NZR1 351 aa20.65■□□□□ 0.9
PDLIM7-201ENST00000355572 COG6Q9Y2V7 657 aa20.65■□□□□ 0.9
PDLIM7-201ENST00000355572 UNCXA6NJT0 531 aa20.64■□□□□ 0.89
PDLIM7-201ENST00000355572 WDHD1O75717 1129 aaPredicted RBP20.64■□□□□ 0.89
PDLIM7-201ENST00000355572 EAF2Q96CJ1 260 aaPredicted RBP20.64■□□□□ 0.89
PDLIM7-201ENST00000355572 WRNIP1Q96S55 665 aa20.64■□□□□ 0.89
PDLIM7-201ENST00000355572 CFHR5Q9BXR6 569 aa20.64■□□□□ 0.89
PDLIM7-201ENST00000355572 EXOC6BQ9Y2D4 811 aa20.64■□□□□ 0.89
PDLIM7-201ENST00000355572 DOCK1Q14185 1865 aa20.64■□□□□ 0.89
PDLIM7-201ENST00000355572 ATAD5Q96QE3 1844 aa20.64■□□□□ 0.89
PDLIM7-201ENST00000355572 MROH7-TTC4A0A0A0MT08 1334 aa20.63■□□□□ 0.89
PDLIM7-201ENST00000355572 TESPA1A2RU30 521 aaPredicted RBP20.63■□□□□ 0.89
PDLIM7-201ENST00000355572 CCDC85CA6NKD9 419 aa20.63■□□□□ 0.89
PDLIM7-201ENST00000355572 BTDP43251 543 aa20.63■□□□□ 0.89
PDLIM7-201ENST00000355572 RGS3P49796 1198 aa20.63■□□□□ 0.89
PDLIM7-201ENST00000355572 RHBDL3P58872 404 aa20.63■□□□□ 0.89
PDLIM7-201ENST00000355572 DZIP1Q86YF9 867 aaKnown RBP20.63■□□□□ 0.89
PDLIM7-201ENST00000355572 SIRT2Q8IXJ6 389 aa20.63■□□□□ 0.89
PDLIM7-201ENST00000355572 BRI3BPQ8WY22 251 aa20.63■□□□□ 0.89
PDLIM7-201ENST00000355572 NSUN4Q96CB9 384 aaKnown RBP20.63■□□□□ 0.89
PDLIM7-201ENST00000355572 OTUD5Q96G74 571 aa20.63■□□□□ 0.89
PDLIM7-201ENST00000355572 CCDC8Q9H0W5 538 aaPredicted RBP20.63■□□□□ 0.89
PDLIM7-201ENST00000355572 GPR108Q9NPR9 543 aa20.63■□□□□ 0.89
PDLIM7-201ENST00000355572 DBNLQ9UJU6 430 aaKnown RBP20.63■□□□□ 0.89
PDLIM7-201ENST00000355572 FAM163AQ96GL9 167 aaPredicted RBP20.62■□□□□ 0.89
PDLIM7-201ENST00000355572 RCAN3Q9UKA8 241 aa20.62■□□□□ 0.89
PDLIM7-201ENST00000355572 NDUFB9Q9Y6M9 179 aa20.62■□□□□ 0.89
PDLIM7-201ENST00000355572 DDTLA6NHG4 134 aaPredicted RBP20.61■□□□□ 0.89
PDLIM7-201ENST00000355572 SPDYE5A6NIY4 337 aa20.61■□□□□ 0.89
PDLIM7-201ENST00000355572 OS9Q13438 667 aaPredicted RBP20.61■□□□□ 0.89
PDLIM7-201ENST00000355572 GORABQ5T7V8 394 aa20.61■□□□□ 0.89
PDLIM7-201ENST00000355572 ERICH6Q7L0X2 663 aa20.61■□□□□ 0.89
PDLIM7-201ENST00000355572 ZGPATQ8N5A5 531 aaKnown RBP20.61■□□□□ 0.89
PDLIM7-201ENST00000355572 IDI2Q9BXS1 227 aa20.61■□□□□ 0.89
PDLIM7-201ENST00000355572 ZNF112Q9UJU3 913 aa20.61■□□□□ 0.89
PDLIM7-201ENST00000355572 GPR75-ASB3A0A0A6YYF3 556 aa20.6■□□□□ 0.89
PDLIM7-201ENST00000355572 CYP2E1P05181 493 aaPredicted RBP20.6■□□□□ 0.89
PDLIM7-201ENST00000355572 CRHR2Q13324 411 aa20.6■□□□□ 0.89
PDLIM7-201ENST00000355572 CTU1Q7Z7A3 348 aaKnown RBP20.6■□□□□ 0.89
PDLIM7-201ENST00000355572 ADGRA1Q86SQ6 560 aa20.6■□□□□ 0.89
PDLIM7-201ENST00000355572 FAM43AQ8N2R8 423 aa20.6■□□□□ 0.89
PDLIM7-201ENST00000355572 ZAP70P43403 619 aa20.59■□□□□ 0.89
PDLIM7-201ENST00000355572 PICALMQ13492 652 aa20.59■□□□□ 0.89
PDLIM7-201ENST00000355572 ZNF341Q9BYN7 854 aa20.59■□□□□ 0.89
PDLIM7-201ENST00000355572 PIH1D3Q9NQM4 214 aaKnown RBP20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms